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KJC3_005428-T1, KJC3_005428-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005428-T1
Unique NameKJC3_005428-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2690912..2692255-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005428-T1 ID=KJC3_005428-T1|Name=KJC3_005428-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1344bp|location=Sequence derived from alignment at ch4:2690912..2692255- (Aspergillus niger KJC3)
TCTCCTCTCCCTCTCTCTTCCCTCTCTATACACCTCTCACTCCAGGCCCT
CTGGGTATCTGATTCATCTTCAACCTCTCCCGACCCCATTTCTAGGACCT
ATACTGTCCCACCCGAGAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCG
GTAAGTTCTGCTCGCCGAATCTTGCCCCTCTTCGGTCGCCCGCCATCTTT
CAATTCCAGGCATTTGTTCGGCACGTTGTTGGCTGGCAAACCTACGAGCC
GGGCAAGTATCATATCTAAAGCATCGATGCTGACCGGTTTCAGGATTCTC
TTTGTAAAGAACCTCAAGTACGTCGATGATTTCCCAAGATTCGTTCCTCG
ACTCGCAAACCATCCGTCGCATACCTGTCGACCAACAGCCAGCAGGCGAC
AGGCGCCCATCGTCTTCCAAAATGCAAGAGCTAACCTGATTGTTTCCTTA
CAGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTG
GTCCCATCCGGTAAATCTGCGCATGACTCACGTTCAGCCCACTTCTTGGT
CAATAATGGCTAATTGTTCCTGTTTCTTCCAGCCAAATACGTCAGGGAAT
CGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATG
ACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGA
TACCTCGTCGGTATGTAACCCCGTGTCAAGGGGAGATGAAGCAGAGAATA
TATGGAGACAAGCCGATTGGCTGACATTTGTTTCTTTCTAGTTCTATATC
ACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAA
GAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATGACGTGATGA
TTGCTTTTGTTCGCTTTCTCTGCATGCCCTTTGCCGGCATCTGGCTGCGT
ATTATCCTGGGTTGGTCGTGGGGTTTCTGGCGTTTTTCTCTCCTATGGGT
TTGATGGCTCTTATTCATTCATGGGTATGAAAGGGTTGCCGGCGGGTTGA
ATGACACCCTGGCTTTTTGTTCAGGAGAATGATACAGAATGGGTTATTTC
AAGCCGGGGTCGGTACTTGTTGCACCGACTCCAAGGTTACCAATATAATC
ATTTCGATCGCCGGCCACCTTTTGGCTGTTGCGGCACCCCCCTCTGAGAT
TACTGCTTACTACAGGAGTTTTGACTTGACTTGCTACAAAGTATGTTCCC
AGTGACCCCGATCAAGGGGGGAACTGACCCTAGCCTACTGCAGAGACCAC
GTCAGTCGTAGAAGTGGACAGAAATCTAGCGATCGTCCAACGGC
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Coding sequence (CDS) from alignment at ch4:2690912..2692255-

>KJC3_005428-T1 ID=KJC3_005428-T1|Name=KJC3_005428-T1|organism=Aspergillus niger KJC3|type=CDS|length=1710bp|location=Sequence derived from alignment at ch4:2690912..2692255- (Aspergillus niger KJC3)
TTCTATATCACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCG
GAAAGGCAAGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATG
ACCAAATACGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTG
GTTTACGAAGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGG
ATTCAACTTCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCA
ACTCTTTGACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAA
AGAACCTCAAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATAT
CACCAGCCTGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCA
AGAGAATTTGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATA
CGTCAGGGAATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGA
AGACGTTCATGACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACT
TCCAGAACAGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTG
ACCTCTTCGGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTC
AAATGAGCCGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCC
TGAGAAAATGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATT
TGGAGCGTCTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGG
AATCGCCAACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTC
ATGACGCCAAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAAC
AGATACCTCGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTC
GGCAAATTTGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGC
CGGAAGCTCGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAA
TGCTTAGGTCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGT
CTCAAACAGCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCA
ACAACTCGAAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCC
AAACAGGCATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCT
CGTCGCTACAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATT
TGGTCCCATCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCT
CGCCCCCGAAGCCAATCGTTCTATATCACCAGCCTGAGAAAATGCTTAGG
TCGAAAGAGGACTTGGCGGAAAGGCAAGAGAATTTGGAGCGTCTCAAACA
GCAACATGGGATAGAATGACCAAATACGTCAGGGAATCGCCAACAACTCG
AAGGGCACAGCCTTTGTGGTTTACGAAGACGTTCATGACGCCAAACAGGC
ATGCGATAAGCTCAATGGATTCAACTTCCAGAACAGATACCTCGTCGCTA
CAACGTCACAGCTGAGCAACTCTTTGACCTCTTCGGCAAATTTGGTCCCA
TCCGGATTCTCTTTGTAAAGAACCTCAAATGAGCCGGAAGCTCGCCCCCG
AAGCCAATCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005428KJC3_005428Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005428-T1KJC3_005428-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005428-T1.cdsKJC3_005428-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005428-T1.utr3p1KJC3_005428-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005428-T1.exon5KJC3_005428-T1.exon5Aspergillus niger KJC3exon
KJC3_005428-T1.exon4KJC3_005428-T1.exon4Aspergillus niger KJC3exon
KJC3_005428-T1.exon3KJC3_005428-T1.exon3Aspergillus niger KJC3exon
KJC3_005428-T1.exon2KJC3_005428-T1.exon2Aspergillus niger KJC3exon
KJC3_005428-T1.exon1KJC3_005428-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005428-T1.utr5p1KJC3_005428-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034150
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF13893
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2690912..2692255 -
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