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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2692660..2698227+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005429-T1 ID=KJC3_005429-T1|Name=KJC3_005429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5568bp|location=Sequence derived from alignment at ch4:2692660..2698227+ (Aspergillus niger KJC3)
CCTCGCGCCTCTCCTGCTCTGTTCCGGTGCAGAGCTCATCTTCTCAATCT
GTTTTTCTGGCGCATTCTTTAATCGCTTGTCCTCCAGTATTCTTCATCAT
ATCCTCCCGCTCCCTGATTGACCCGTCTAAGACATTTCTTTTTTCGCCCG
CACCCGCCGCGGTGCATACTCGGGGCTCTCTCTTCCCGCCGCTCTCGATT
GAACTCCCAGTCGGCAGAGACTCTCAACTTCCCCCCCTCAACCTCTCCGC
CGTGCGACTCTCCTCCGTCACCCTCTCCTTCCACCACCCCACCACCCCAC
CATCTCCTCGGTTTCCTCTCTGATTCACTTTCCATCTCATTGTTTACTGT
GCGCTCTCCAGTCTGCCAGGAATGACTCTCTTTTTGCCTGCGGTGGCCTC
TCTTTAGCCCGTGTGGTCGAACATCCCCGCTTTGCACCCGTCTGCCGCAA
GCACGCCTGTTTCCTCCTCCGGGCCCTTTTCTTTCTCTCCTTTCCCTCCG
ATTCCATCCTCAGATCACACGATGATCACTGCTACATCCTTTTTGAATCA
TATTGGGAGCCGACCGCCGCGGTATCGCACTCCCTCGCCGCCGCGACGCG
CCGTCGAGCCTATCTCGCCTTGCTCAACCTCCGACCTCCGTGCATCATGG
GTCGACCGCAACGTCTCTCGGGTTGCTGCCTCCGATCGCGACCACTTTGT
ACCTCACAATCCTACACTGCACCATCATGCTGATGAGACAGCTTCTCATC
GCTCTAGCCATGGCCGCTCCGGTTCTACCATCGACGCTCTCGCAACGATC
GCCCTAGCGACGAGTCCTACCTTCGCACCTCTTTCCTACCGACCTCCTTC
TCAAAACTCCACCCCCGCCATGTCGCTATTCCCCTCCGAGCCCATCGAAT
CTACAGAACGCCCAAGCAAGCGTCCGCGGTCGGAAAAGGATCCCTCTCCA
TATACCCAACACCGGACAGTGGCCGTGTCAGATGCAAATTCTGCTTCGTT
GTTTGATAGCATGAAGACAGACGCAGAGCTTTTGCTGAATCTGGCACGGC
CCACAAACTTTCATCCTCCCTCGCATCCCGCGAAACGTGTCAGCATCGAC
GAGTCGTTTTATCATTATGGGGACGAACAAAAGCATCATGTCATGGCGGA
TTCGGGCGGCGCGAGCTGGAGGTTCAATGACGAAAAATATGCATACAATG
CTCCCGGGCCCAACAACATGCCGTCTCGGGTGAGGTCACAGTCCGACGGT
TCAGCTGCTATATCACGCCCGGTTATCCATGGCATGCGACCCAATACAAG
CTCCTCCACTCTTCCACCAATTCTATGGCAGGAGGAAGGGGACGCTGAAA
ACGACTATTCACCCACAAAGTTCGTCATAAATAGTAGGCCGAGCGAGACA
CAAGCACAACTATCAATGCACACCACCAACATGGCACAAATGCCAATAGA
GCATTCTTCCAAGATTGAAGATGATACGGAGGAGTCTAACCAGGCTAGCT
GCGCGGCTTGCAATCTTGTGCGGATCCCGATGGACACTGGCGAGCAAGGC
GATGTGACATGGATAAGCTGCGATGGTTGCAAACGGTGGTTTCATATTGT
CTGTGCTGGGTTCAAGAGTGACCGCGAACTCCGAACAGTGGACAAATTTA
TCTGTCGAGAATGCCGTCCTATTTATGGACAGACTACGTTCGTGCGCAAA
TCTTCTCGCGCTCGCACAGCTATTGATTATGCCGGCCTCAACCAAGGGCT
TGTCAAGGCCGCTACGGACTCTCTCGAACATCACTACATTGAACCCATCC
GACAGGGCAAAATTCAGTTCCTACCTGAAAATTTCCCACGAATGCGTCCT
GAGCTGGTCACTGCCGAGTATTTCGAGCGAGGCAATGGCATGACGGAACC
AATTGTCATCCCTGCGGAGTGGAACACTCGCGAGTCCGTTTCGATCAGTA
ATTCCGAGTTTGACACCTTAGTACAAGAGGCGCCTACGCAAGAAATGTTC
GACGAGCTGCTGGATCATATTGTCGAGCAAGAGGAAGGCTACGAGCAAGT
GATAGATTGTGGCCAGGATCAGTTGGACATGGTGATTCCTGAAGGCCTTA
CCGTTCGAAGAGTTGCGGAGCTTTACGGACCAGAAGAAAGAGTCGAGGTC
ATTGATGTCAAATCGCAGCAGAACGAAGACAAGAGGTGGACAATGCAGAA
ATGGGCGGAATACTACGAGAGTACTGGCGACAAGGTTGTCCGAAACGTCA
TCAGTTTGGAAGTCTCACAGAGCCCATTGGGCAGGCTCATTCGTCGGCCA
AAGGTTGTCCGGGATCTTGACCTTCAGGACTCTGTCTGGCCTGACGAACA
GAAGGCCGTCGGCGATTGCCCGAAAGTCCAGTTCTACGTCTTAATGTCTG
TCGCTGACTGCTATACCGATTTCCACATCGACTTTGGAGGGTCCTCGGTA
TATTATCATATTCTGAAAGGCAAAAAGACCTTCTTTTTCATCCCGCCCAA
GGACAAGCACCTGAAAAAGTATGAGGAGTGGTGTAATTCTCCTGCGCAGG
ATTCCACCTTTCTTGGGGACCAAACCAAGGAATGCTATCGCGTGGATCTG
TCTGAAGGCGATACGATGCTGATCCCCTCGGGCTGGATCCATGCCGTCTG
GACCCCCGAGAACAGTCTTGTCATCGGTGGGAATTTCCTTACGAGGCTGA
ACTACGGGATGCAGATTAAGATCGCGCAGATCGAGAAGGATACCAAGGTT
CCACGGAAGTTCAGGTACCCGTTCTTCCAGAAGATACAATGGTATACCGC
GTTGCGATATCTCGAAGATGACCCGCTACCGCAGAGCGTTCTTGACGCCT
TCGCGCAGGACGAAAACTACCGCTTCCACCGAGCGTATCCGATCTACTAC
GAATTCGGCGAACGGACGAACAATGCGCCTGCCGGGTCGCCTTATCACAA
CTCGCGCTTCTATTCTCAAGCGGAACTGGAAGGGCTACCAGATCTTGCAA
AATACCTCTATCACACTGCCCTCATTGCTGGCGCCTATCTGACGGAGGGC
GTGACGATGGATACCAGGAATGCGGTCAAACGCTCGATACCTAAGATGTC
CGGGGAGCCAATCGATGCCGTAAGGAAGTTTGGCATCTGGGTCGCCTGGA
AGCGTGGCAATGAGAGGGCACCGCATTGGACCCGCCCTGGCGTGGCTGAA
AGCAATGCGAAACTCAGTCTCGCGGAGAAGAAACCCGCCGGAAGGCCCAG
CCGTCGCTCAGAGCGTAATGCCGAGAGCCAACGCACGTACGCAGAAAGAC
AGGCTGTACAGCGGCTTCCAGAGCCGGCTCATGACCCAGCAACCGAAATG
AGCAACAGTAGTGGCCCTAGTGGTCCGCTGAATGCCGGAGCTGCTATGCC
AGACGGCCCGTCGAGCAGTGGCATCAAAGAAGAGCCTGCTCCCAAATCGC
GCGCTGCACCCCGTGGCTCCGGACTGGGCCCTAAGCGCGTTGCCTGCGAT
GCCTGTCGCAAGCGAAGGATCCGGTGTCACCACAAGGATGAACATAACGA
CGGTATTTCCAGCAAGCAAACGGCCGTGACCGCTTTCGGCCCCAGCAACC
ATTCGTTAGCACACGACGCAGCGTCTGCGCTGAATTCACTTGCCGCTATT
GCATCGGAAGCAGGCTTTCAAGACAATGGAAGTGGCAGGAACCCGGATCG
GTTTGAAGTCGCTGCCAAGTTCAACTCCGCCATTTTGGGTACGCCGCGTG
CACCGGTCAATGGACTCGGACTCAATGATGCCAGTCCTGAAGGCGCCAAC
ACCGGAAAGAAGGGCCGCAGCAAGGCCTGCGACGACTGCCGGAAGAGCAA
GGTTCGTTTTCTTTCTTTCTTTCTTTCTTCTTCTTTTTCCCTCTCCTTTT
CTATTCAGTTCTAATACTAACTGACAACAGCGTCGGTGTATCCACGATGA
GTACGGCCGTATTGACCCTGTTAAGGCGCAAGAACGAGCAAAGCCGCGCG
CTGCTGCTTCTGCCAAACGGCCTCGTATCAACGAAGAAGGAACTGGGCCG
ATGATCAACAAACGGATGAAGCAGGAGAGCACATCGCCTACGTCGAGGCC
GGCACATCTCAGCAACAATCGTGAAGCTGGTGCGCCAGGGACGCAAGATC
ACCTGTCCGATCATGCTCATGCAGCCGTGGATCTCCATGCCCCGTTCTCG
GATGCGCCGCTGGCTGATAAAGACTCAAATCGGCAGTCGGGAATGACCGT
TGGGGAAAAGGAAGCACCATTGGGGCCAACCTCCTACGCATCACCGCCTA
CGTTCCAGACTGACACGGTCGATGCGAAGGAAATAGATTCTGCGCCTGTC
TCTAAGCCTACTGCCACCCTTGTATCACCGCCGACCTCACTGGCCGACGA
GACCGATGTTCCTCAGGAACAAGCAGACGGAGAAGGGGACCATGTGGTAG
TCCTGCACACACCAACCTCAAGTTCCCGGCACTCTTCGCGCCAACCGCGC
CAGGTTGATCGGTACATGCCTGAGACGCATGTTTCCAGGCCGACCAAGGG
GACGACCCATACCCCCACCGCCCGTCGTTCTTCGTTCGGCGGTTCAAGCG
GTGGTGTGCGAAAATCCACCCCAGGTCCTTCTTCAGGCTCCAAAAAGTCC
GCATCACGCCCCTCCTCGTCCTCGCATGCCAAGAAGAGTTTCTGGTCGAC
CGACGAGAAAAAGGGCGACCGGCACTCTGCGACGTCAACATCTCCTGGGC
AGCCGGGCAAAAACCCTAAGCGGGTTGCGGACGAGGAGCCGGATGCTGAG
AGCCTCCGCTTGATCCGTGAACTGCAAGAAGCCGAGTTCGGGCTACGCAA
GAGATCCACACGAGTGTGAGGGCGAGAAGGCAGCAGCAGATGAGTTTCAT
GTTTTTCACCATTTTAGACCACCTAGATCGGGCAACCGGAGAAATTAGGT
TTGAGACGATCGGATTCGATCAATTGGCAGTGTTTCCTGGGATGTGGAGT
TTGGTAGGGAAGGGAGTCTGCTGGCGATGATCGGTTTGGCTTGGTCCATC
GATATGCTTTGGCCCTTGATTATTGTGATTCCCTTTTGGCGTCTCGTTAT
TCGGCCGGCTTTTGTTTCTATGTACCGGGATGTTTTGTTTTCTTCTTTTC
ATAATCTGTACCTGGCGTTGTTCATGTGGCGGTTGGGGAGTTTTCGACCA
GATCGGTCTGTTCGTTCCTTTCCTGGGATTCCCATTTCCTTATCCTTTCT
GATTTCCCATTCGATATCAATTGCAGTTCTAACTCTGGCTCCGACCCTGG
GGTCGGGTCACATCTTTTTACCTCTTCCCATCGTTCCTTTTCATCATTCC
TTTGCAGTATTCTTCTATTACTATACCAGTATACCTAGCTCTGCTTCAGC
GTTTACTCTGCCTCTGTCCCGTATTCCCTTCATCTTTACATTTTGGCAAG
TCCTGCTCTGGTTTTCTGTTTTCATCTAGGTACTAGCCAGCTGCTGTGCC
TGATTTGTTTGCTAATCACTGGATCTCGTGTATGTCTATCGTACTATCTA
CCTTTGTCGTAATCCCAC back to topCoding sequence (CDS) from alignment at ch4:2692660..2698227+ >KJC3_005429-T1 ID=KJC3_005429-T1|Name=KJC3_005429-T1|organism=Aspergillus niger KJC3|type=CDS|length=8538bp|location=Sequence derived from alignment at ch4:2692660..2698227+ (Aspergillus niger KJC3)
ATGATCACTGCTACATCCTTTTTGAATCATATTGGGAGCCGACCGCCGCG
GTATCGCACTCCCTCGCCGCCGCGACGCGCCGTCGAGCCTATCTCGCCTT
GCTCAACCTCCGACCTCCGTGCATCATGGGTCGACCGCAACGTCTCTCGG
GTTGCTGCCTCCGATCGCGACCACTTTGTACCTCACAATCCTACACTGCA
CCATCATGCTGATGAGACAGCTTCTCATCGCTCTAGCCATGGCCGCTCCG
GTTCTACCATCGACGCTCTCGCAACGATCGCCCTAGCGACGAGTCCTACC
TTCGCACCTCTTTCCTACCGACCTCCTTCTCAAAACTCCACCCCCGCCAT
GTCGCTATTCCCCTCCGAGCCCATCGAATCTACAGAACGCCCAAGCAAGC
GTCCGCGGTCGGAAAAGGATCCCTCTCCATATACCCAACACCGGACAGTG
GCCGTGTCAGATGCAAATTCTGCTTCGTTGTTTGATAGCATGAAGACAGA
CGCAGAGCTTTTGCTGAATCTGGCACGGCCCACAAACTTTCATCCTCCCT
CGCATCCCGCGAAACGTGTCAGCATCGACGAGTCGTTTTATCATTATGGG
GACGAACAAAAGCATCATGTCATGGCGGATTCGGGCGGCGCGAGCTGGAG
GTTCAATGACGAAAAATATGCATACAATGCTCCCGGGCCCAACAACATGC
CGTCTCGGGTGAGGTCACAGTCCGACGGTTCAGCTGCTATATCACGCCCG
GTTATCCATGGCATGCGACCCAATACAAGCTCCTCCACTCTTCCACCAAT
TCTATGGCAGGAGGAAGGGGACGCTGAAAACGACTATTCACCCACAAAGT
TCGTCATAAATAGTAGGCCGAGCGAGACACAAGCACAACTATCAATGCAC
ACCACCAACATGGCACAAATGCCAATAGAGCATTCTTCCAAGATTGAAGA
TGATACGGAGGAGTCTAACCAGGCTAGCTGCGCGGCTTGCAATCTTGTGC
GGATCCCGATGGACACTGGCGAGCAAGGCGATGTGACATGGATAAGCTGC
GATGGTTGCAAACGGTGGTTTCATATTGTCTGTGCTGGGTTCAAGAGTGA
CCGCGAACTCCGAACAGTGGACAAATTTATCTGTCGAGAATGCCGTCCTA
TTTATGGACAGACTACGTTCGTGCGCAAATCTTCTCGCGCTCGCACAGCT
ATTGATTATGCCGGCCTCAACCAAGGGCTTGTCAAGGCCGCTACGGACTC
TCTCGAACATCACTACATTGAACCCATCCGACAGGGCAAAATTCAGTTCC
TACCTGAAAATTTCCCACGAATGCGTCCTGAGCTGGTCACTGCCGAGTAT
TTCGAGCGAGGCAATGGCATGACGGAACCAATTGTCATCCCTGCGGAGTG
GAACACTCGCGAGTCCGTTTCGATCAGTAATTCCGAGTTTGACACCTTAG
TACAAGAGGCGCCTACGCAAGAAATGTTCGACGAGCTGCTGGATCATATT
GTCGAGCAAGAGGAAGGCTACGAGCAAGTGATAGATTGTGGCCAGGATCA
GTTGGACATGGTGATTCCTGAAGGCCTTACCGTTCGAAGAGTTGCGGAGC
TTTACGGACCAGAAGAAAGAGTCGAGGTCATTGATGTCAAATCGCAGCAG
AACGAAGACAAGAGGTGGACAATGCAGAAATGGGCGGAATACTACGAGAG
TACTGGCGACAAGGTTGTCCGAAACGTCATCAGTTTGGAAGTCTCACAGA
GCCCATTGGGCAGGCTCATTCGTCGGCCAAAGGTTGTCCGGGATCTTGAC
CTTCAGGACTCTGTCTGGCCTGACGAACAGAAGGCCGTCGGCGATTGCCC
GAAAGTCCAGTTCTACGTCTTAATGTCTGTCGCTGACTGCTATACCGATT
TCCACATCGACTTTGGAGGGTCCTCGGTATATTATCATATTCTGAAAGGC
AAAAAGACCTTCTTTTTCATCCCGCCCAAGGACAAGCACCTGAAAAAGTA
TGAGGAGTGGTGTAATTCTCCTGCGCAGGATTCCACCTTTCTTGGGGACC
AAACCAAGGAATGCTATCGCGTGGATCTGTCTGAAGGCGATACGATGCTG
ATCCCCTCGGGCTGGATCCATGCCGTCTGGACCCCCGAGAACAGTCTTGT
CATCGGTGGGAATTTCCTTACGAGGCTGAACTACGGGATGCAGATTAAGA
TCGCGCAGATCGAGAAGGATACCAAGGTTCCACGGAAGTTCAGGTACCCG
TTCTTCCAGAAGATACAATGGTATACCGCGTTGCGATATCTCGAAGATGA
CCCGCTACCGCAGAGCGTTCTTGACGCCTTCGCGCAGGACGAAAACTACC
GCTTCCACCGAGCGTATCCGATCTACTACGAATTCGGCGAACGGACGAAC
AATGCGCCTGCCGGGTCGCCTTATCACAACTCGCGCTTCTATTCTCAAGC
GGAACTGGAAGGGCTACCAGATCTTGCAAAATACCTCTATCACACTGCCC
TCATTGCTGGCGCCTATCTGACGGAGGGCGTGACGATGGATACCAGGAAT
GCGGTCAAACGCTCGATACCTAAGATGTCCGGGGAGCCAATCGATGCCGT
AAGGAAGTTTGGCATCTGGGTCGCCTGGAAGCGTGGCAATGAGAGGGCAC
CGCATTGGACCCGCCCTGGCGTGGCTGAAAGCAATGCGAAACTCAGTCTC
GCGGAGAAGAAACCCGCCGGAAGGCCCAGCCGTCGCTCAGAGCGTAATGC
CGAGAGCCAACGCACGTACGCAGAAAGACAGGCTGTACAGCGGCTTCCAG
AGCCGGCTCATGACCCAGCAACCGAAATGAGCAACAGTAGTGGCCCTAGT
GGTCCGCTGAATGCCGGAGCTGCTATGCCAGACGGCCCGTCGAGCAGTGG
CATCAAAGAAGAGCCTGCTCCCAAATCGCGCGCTGCACCCCGTGGCTCCG
GACTGGGCCCTAAGCGCGTTGCCTGCGATGCCTGTCGCAAGCGAAGGATC
CGGTGTCACCACAAGGATGAACATAACGACGGTATTTCCAGCAAGCAAAC
GGCCGTGACCGCTTTCGGCCCCAGCAACCATTCGTTAGCACACGACGCAG
CGTCTGCGCTGAATTCACTTGCCGCTATTGCATCGGAAGCAGGCTTTCAA
GACAATGGAAGTGGCAGGAACCCGGATCGGTTTGAAGTCGCTGCCAAGTT
CAACTCCGCCATTTTGGGTACGCCGCGTGCACCGGTCAATGGACTCGGAC
TCAATGATGCCAGTCCTGAAGGCGCCAACACCGGAAAGAAGGGCCGCAGC
AAGGCCTGCGACGACTGCCGGAAGAGCAAGCGTCGGTGTATCCACGATGA
GTACGGCCGTATTGACCCTGTTAAGGCGCAAGAACGAGCAAAGCCGCGCG
CTGCTGCTTCTGCCAAACGGCCTCGTATCAACGAAGAAGGAACTGGGCCG
ATGATCAACAAACGGATGAAGCAGGAGAGCACATCGCCTACGTCGAGGCC
GGCACATCTCAGCAACAATCGTGAAGCTGGTGCGCCAGGGACGCAAGATC
ACCTGTCCGATCATGCTCATGCAGCCGTGGATCTCCATGCCCCGTTCTCG
GATGCGCCGCTGGCTGATAAAGACTCAAATCGGCAGTCGGGAATGACCGT
TGGGGAAAAGGAAGCACCATTGGGGCCAACCTCCTACGCATCACCGCCTA
CGTTCCAGACTGACACGGTCGATGCGAAGGAAATAGATTCTGCGCCTGTC
TCTAAGCCTACTGCCACCCTTGTATCACCGCCGACCTCACTGGCCGACGA
GACCGATGTTCCTCAGGAACAAGCAGACGGAGAAGGGGACCATGTGGTAG
TCCTGCACACACCAACCTCAAGTTCCCGGCACTCTTCGCGCCAACCGCGC
CAGGTTGATCGGTACATGCCTGAGACGCATGTTTCCAGGCCGACCAAGGG
GACGACCCATACCCCCACCGCCCGTCGTTCTTCGTTCGGCGGTTCAAGCG
GTGGTGTGCGAAAATCCACCCCAGGTCCTTCTTCAGGCTCCAAAAAGTCC
GCATCACGCCCCTCCTCGTCCTCGCATGCCAAGAAGAGTTTCTGGTCGAC
CGACGAGAAAAAGGGCGACCGGCACTCTGCGACGTCAACATCTCCTGGGC
AGCCGGGCAAAAACCCTAAGCGGGTTGCGGACGAGGAGCCGGATGCTGAG
AGCCTCCGCTTGATCCGTGAACTGCAAGAAGCCGAGTTCGGGCTACGCAA
GAGATCCACACGAGTGTGAATGATCACTGCTACATCCTTTTTGAATCATA
TTGGGAGCCGACCGCCGCGGTATCGCACTCCCTCGCCGCCGCGACGCGCC
GTCGAGCCTATCTCGCCTTGCTCAACCTCCGACCTCCGTGCATCATGGGT
CGACCGCAACGTCTCTCGGGTTGCTGCCTCCGATCGCGACCACTTTGTAC
CTCACAATCCTACACTGCACCATCATGCTGATGAGACAGCTTCTCATCGC
TCTAGCCATGGCCGCTCCGGTTCTACCATCGACGCTCTCGCAACGATCGC
CCTAGCGACGAGTCCTACCTTCGCACCTCTTTCCTACCGACCTCCTTCTC
AAAACTCCACCCCCGCCATGTCGCTATTCCCCTCCGAGCCCATCGAATCT
ACAGAACGCCCAAGCAAGCGTCCGCGGTCGGAAAAGGATCCCTCTCCATA
TACCCAACACCGGACAGTGGCCGTGTCAGATGCAAATTCTGCTTCGTTGT
TTGATAGCATGAAGACAGACGCAGAGCTTTTGCTGAATCTGGCACGGCCC
ACAAACTTTCATCCTCCCTCGCATCCCGCGAAACGTGTCAGCATCGACGA
GTCGTTTTATCATTATGGGGACGAACAAAAGCATCATGTCATGGCGGATT
CGGGCGGCGCGAGCTGGAGGTTCAATGACGAAAAATATGCATACAATGCT
CCCGGGCCCAACAACATGCCGTCTCGGGTGAGGTCACAGTCCGACGGTTC
AGCTGCTATATCACGCCCGGTTATCCATGGCATGCGACCCAATACAAGCT
CCTCCACTCTTCCACCAATTCTATGGCAGGAGGAAGGGGACGCTGAAAAC
GACTATTCACCCACAAAGTTCGTCATAAATAGTAGGCCGAGCGAGACACA
AGCACAACTATCAATGCACACCACCAACATGGCACAAATGCCAATAGAGC
ATTCTTCCAAGATTGAAGATGATACGGAGGAGTCTAACCAGGCTAGCTGC
GCGGCTTGCAATCTTGTGCGGATCCCGATGGACACTGGCGAGCAAGGCGA
TGTGACATGGATAAGCTGCGATGGTTGCAAACGGTGGTTTCATATTGTCT
GTGCTGGGTTCAAGAGTGACCGCGAACTCCGAACAGTGGACAAATTTATC
TGTCGAGAATGCCGTCCTATTTATGGACAGACTACGTTCGTGCGCAAATC
TTCTCGCGCTCGCACAGCTATTGATTATGCCGGCCTCAACCAAGGGCTTG
TCAAGGCCGCTACGGACTCTCTCGAACATCACTACATTGAACCCATCCGA
CAGGGCAAAATTCAGTTCCTACCTGAAAATTTCCCACGAATGCGTCCTGA
GCTGGTCACTGCCGAGTATTTCGAGCGAGGCAATGGCATGACGGAACCAA
TTGTCATCCCTGCGGAGTGGAACACTCGCGAGTCCGTTTCGATCAGTAAT
TCCGAGTTTGACACCTTAGTACAAGAGGCGCCTACGCAAGAAATGTTCGA
CGAGCTGCTGGATCATATTGTCGAGCAAGAGGAAGGCTACGAGCAAGTGA
TAGATTGTGGCCAGGATCAGTTGGACATGGTGATTCCTGAAGGCCTTACC
GTTCGAAGAGTTGCGGAGCTTTACGGACCAGAAGAAAGAGTCGAGGTCAT
TGATGTCAAATCGCAGCAGAACGAAGACAAGAGGTGGACAATGCAGAAAT
GGGCGGAATACTACGAGAGTACTGGCGACAAGGTTGTCCGAAACGTCATC
AGTTTGGAAGTCTCACAGAGCCCATTGGGCAGGCTCATTCGTCGGCCAAA
GGTTGTCCGGGATCTTGACCTTCAGGACTCTGTCTGGCCTGACGAACAGA
AGGCCGTCGGCGATTGCCCGAAAGTCCAGTTCTACGTCTTAATGTCTGTC
GCTGACTGCTATACCGATTTCCACATCGACTTTGGAGGGTCCTCGGTATA
TTATCATATTCTGAAAGGCAAAAAGACCTTCTTTTTCATCCCGCCCAAGG
ACAAGCACCTGAAAAAGTATGAGGAGTGGTGTAATTCTCCTGCGCAGGAT
TCCACCTTTCTTGGGGACCAAACCAAGGAATGCTATCGCGTGGATCTGTC
TGAAGGCGATACGATGCTGATCCCCTCGGGCTGGATCCATGCCGTCTGGA
CCCCCGAGAACAGTCTTGTCATCGGTGGGAATTTCCTTACGAGGCTGAAC
TACGGGATGCAGATTAAGATCGCGCAGATCGAGAAGGATACCAAGGTTCC
ACGGAAGTTCAGGTACCCGTTCTTCCAGAAGATACAATGGTATACCGCGT
TGCGATATCTCGAAGATGACCCGCTACCGCAGAGCGTTCTTGACGCCTTC
GCGCAGGACGAAAACTACCGCTTCCACCGAGCGTATCCGATCTACTACGA
ATTCGGCGAACGGACGAACAATGCGCCTGCCGGGTCGCCTTATCACAACT
CGCGCTTCTATTCTCAAGCGGAACTGGAAGGGCTACCAGATCTTGCAAAA
TACCTCTATCACACTGCCCTCATTGCTGGCGCCTATCTGACGGAGGGCGT
GACGATGGATACCAGGAATGCGGTCAAACGCTCGATACCTAAGATGTCCG
GGGAGCCAATCGATGCCGTAAGGAAGTTTGGCATCTGGGTCGCCTGGAAG
CGTGGCAATGAGAGGGCACCGCATTGGACCCGCCCTGGCGTGGCTGAAAG
CAATGCGAAACTCAGTCTCGCGGAGAAGAAACCCGCCGGAAGGCCCAGCC
GTCGCTCAGAGCGTAATGCCGAGAGCCAACGCACGTACGCAGAAAGACAG
GCTGTACAGCGGCTTCCAGAGCCGGCTCATGACCCAGCAACCGAAATGAG
CAACAGTAGTGGCCCTAGTGGTCCGCTGAATGCCGGAGCTGCTATGCCAG
ACGGCCCGTCGAGCAGTGGCATCAAAGAAGAGCCTGCTCCCAAATCGCGC
GCTGCACCCCGTGGCTCCGGACTGGGCCCTAAGCGCGTTGCCTGCGATGC
CTGTCGCAAGCGAAGGATCCGGTGTCACCACAAGGATGAACATAACGACG
GTATTTCCAGCAAGCAAACGGCCGTGACCGCTTTCGGCCCCAGCAACCAT
TCGTTAGCACACGACGCAGCGTCTGCGCTGAATTCACTTGCCGCTATTGC
ATCGGAAGCAGGCTTTCAAGACAATGGAAGTGGCAGGAACCCGGATCGGT
TTGAAGTCGCTGCCAAGTTCAACTCCGCCATTTTGGGTACGCCGCGTGCA
CCGGTCAATGGACTCGGACTCAATGATGCCAGTCCTGAAGGCGCCAACAC
CGGAAAGAAGGGCCGCAGCAAGGCCTGCGACGACTGCCGGAAGAGCAAGC
GTCGGTGTATCCACGATGAGTACGGCCGTATTGACCCTGTTAAGGCGCAA
GAACGAGCAAAGCCGCGCGCTGCTGCTTCTGCCAAACGGCCTCGTATCAA
CGAAGAAGGAACTGGGCCGATGATCAACAAACGGATGAAGCAGGAGAGCA
CATCGCCTACGTCGAGGCCGGCACATCTCAGCAACAATCGTGAAGCTGGT
GCGCCAGGGACGCAAGATCACCTGTCCGATCATGCTCATGCAGCCGTGGA
TCTCCATGCCCCGTTCTCGGATGCGCCGCTGGCTGATAAAGACTCAAATC
GGCAGTCGGGAATGACCGTTGGGGAAAAGGAAGCACCATTGGGGCCAACC
TCCTACGCATCACCGCCTACGTTCCAGACTGACACGGTCGATGCGAAGGA
AATAGATTCTGCGCCTGTCTCTAAGCCTACTGCCACCCTTGTATCACCGC
CGACCTCACTGGCCGACGAGACCGATGTTCCTCAGGAACAAGCAGACGGA
GAAGGGGACCATGTGGTAGTCCTGCACACACCAACCTCAAGTTCCCGGCA
CTCTTCGCGCCAACCGCGCCAGGTTGATCGGTACATGCCTGAGACGCATG
TTTCCAGGCCGACCAAGGGGACGACCCATACCCCCACCGCCCGTCGTTCT
TCGTTCGGCGGTTCAAGCGGTGGTGTGCGAAAATCCACCCCAGGTCCTTC
TTCAGGCTCCAAAAAGTCCGCATCACGCCCCTCCTCGTCCTCGCATGCCA
AGAAGAGTTTCTGGTCGACCGACGAGAAAAAGGGCGACCGGCACTCTGCG
ACGTCAACATCTCCTGGGCAGCCGGGCAAAAACCCTAAGCGGGTTGCGGA
CGAGGAGCCGGATGCTGAGAGCCTCCGCTTGATCCGTGAACTGCAAGAAG
CCGAGTTCGGGCTACGCAAGAGATCCACACGAGTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005429-T1.utr5p1 | KJC3_005429-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005429-T1.utr3p1 | KJC3_005429-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR019786 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR041667 |
| DBxref | InterPro:IPR041070 |
| DBxref | InterPro:IPR003347 |
| DBxref | InterPro:IPR001965 |
| DBxref | PFAM:PF00628 |
| DBxref | PFAM:PF02373 |
| DBxref | PFAM:PF13621 |
| Product | JmjC domain-containing histone demethylation protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2692660..2698227 + |
|
