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KJC3_005438-T1, KJC3_005438-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005438-T1
Unique NameKJC3_005438-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2721089..2722103-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005438-T1 ID=KJC3_005438-T1|Name=KJC3_005438-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1015bp|location=Sequence derived from alignment at ch4:2721089..2722103- (Aspergillus niger KJC3)
ATGGTTGTGGCAACAATTAAGTGCGTTGTTCTCATCATCTTTATCCCTTT
CTCTCCGCAATCACTTTTCCCCCTCCTCTCTTTCCCCTCCCCCCATTTGA
ATACACCCCCCCTCTATCCTGTCCCTTCCTTCCCCTTTCTCCGTGCAAAC
CGAACACATTCATTCTTTCTTTCTTTCTTGGAGCGGCAGGTTGCTAACCA
TAGTTTGACTTTTGTCGCAGATGCGTTGTCGTCGGTGACGGTGCCGTTGG
CAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAAT
ATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATGTAAGTTAGG
GATCTCCTATCATTGAACACGATTTACATATCGGGACTCTGTCGGAGTGC
GCTATATCACACTGCCAATAGCGTTATTGGTGCAACCCAATGTCGCTGGC
TCGACGAATGCGATGGCGTCTGTGGACAAATATCGGAATCTGGAACTGAC
TCGAATCCGTTGCGCAATAGGATTGGCGATGAGCCCTACACTCTGGGATT
GTTTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGT
ATCCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCC
TCCTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTG
CCCCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACG
ATCCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGC
AAAGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGT
GGAGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGG
TTAGTGTCGCGCCACATCCCGCGTCGTCGCATCTACTCACACATGTCGAT
TCTAGGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAG
TGCGTCCTGCTGTAA
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Coding sequence (CDS) from alignment at ch4:2721089..2722103-

>KJC3_005438-T1 ID=KJC3_005438-T1|Name=KJC3_005438-T1|organism=Aspergillus niger KJC3|type=CDS|length=2316bp|location=Sequence derived from alignment at ch4:2721089..2722103- (Aspergillus niger KJC3)
GCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGCGT
CCTGCTGTAAGATTGGCGATGAGCCCTACACTCTGGGATTGTTTGATACT
GCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTATCCTCAGAC
GGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGAGA
ACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCCCCGGTGTC
CCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGATCCCGCTGT
CCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAAAGAAGATG
GAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGGAGTGTTCT
GCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGATGCGTTGTCG
TCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTCTTACACGACG
AACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTGATAACTATGCCGT
CACAGTCATATGGTTGTGGCAACAATTAAGCGATTGTTGCCGCGCTCGAG
CCCGCTCCTAAGAAGTCGAAGAAGTGCGTCCTGCTGTAAGATTGGCGATG
AGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGGATTACGAT
CGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTCGTTTGCTT
TTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAAGTGGTTCC
CCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCGTGGGCACC
CAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTTGCCCGCCA
GAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGCCAAGGAGC
TGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGTACAAGCTC
AAGGACGTCTTTGACGAGATGCGTTGTCGTCGGTGACGGTGCCGTTGGCA
AGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTTCCGAATAT
GTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATATGGTTGTGGCA
ACAATTAAGCGATTGTTGCCGCGCTCGAGCCCGCTCCTAAGAAGTCGAAG
AAGTGCGTCCTGCTGTAAGATTGGCGATGAGCCCTACACTCTGGGATTGT
TTGATACTGCTGGTCAGGAGGATTACGATCGTCTTCGTCCTCTTTCGTAT
CCTCAGACGGATGTCTTCCTCGTTTGCTTTTCGGTCACTTCGCCTGCCTC
CTTTGAGAACGTACGCGAAAAGTGGTTCCCCGAGGTGCACCACCACTGCC
CCGGTGTCCCCTGCCTGATCGTGGGCACCCAAACCGATCTTCGCGACGAT
CCCGCTGTCCGCGAGAAGCTTGCCCGCCAGAAGATGCAACCGATTCGCAA
AGAAGATGGAGACCGTATGGCCAAGGAGCTGGGCGCAGTGAAATACGTGG
AGTGTTCTGCCCTCACGCAGTACAAGCTCAAGGACGTCTTTGACGAGATG
CGTTGTCGTCGGTGACGGTGCCGTTGGCAAGACCTGCCTTTTGATCTCTT
ACACGACGAACAAGTTCCCTTCCGAATATGTTCCCACGGTGTTTGATAAC
TATGCCGTCACAGTCATATGGTTGTGGCAACAATTAAGCGATTGTTGCCG
CGCTCGAGCCCGCTCCTAAGAAGTCGAAGAAGTGCGTCCTGCTGTAAGAT
TGGCGATGAGCCCTACACTCTGGGATTGTTTGATACTGCTGGTCAGGAGG
ATTACGATCGTCTTCGTCCTCTTTCGTATCCTCAGACGGATGTCTTCCTC
GTTTGCTTTTCGGTCACTTCGCCTGCCTCCTTTGAGAACGTACGCGAAAA
GTGGTTCCCCGAGGTGCACCACCACTGCCCCGGTGTCCCCTGCCTGATCG
TGGGCACCCAAACCGATCTTCGCGACGATCCCGCTGTCCGCGAGAAGCTT
GCCCGCCAGAAGATGCAACCGATTCGCAAAGAAGATGGAGACCGTATGGC
CAAGGAGCTGGGCGCAGTGAAATACGTGGAGTGTTCTGCCCTCACGCAGT
ACAAGCTCAAGGACGTCTTTGACGAGATGCGTTGTCGTCGGTGACGGTGC
CGTTGGCAAGACCTGCCTTTTGATCTCTTACACGACGAACAAGTTCCCTT
CCGAATATGTTCCCACGGTGTTTGATAACTATGCCGTCACAGTCATATGG
TTGTGGCAACAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CDC42KJC3_005438Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005438-T1KJC3_005438-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005438-T1.cdsKJC3_005438-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005438-T1.exon4KJC3_005438-T1.exon4Aspergillus niger KJC3exon
KJC3_005438-T1.exon3KJC3_005438-T1.exon3Aspergillus niger KJC3exon
KJC3_005438-T1.exon2KJC3_005438-T1.exon2Aspergillus niger KJC3exon
KJC3_005438-T1.exon1KJC3_005438-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR037874
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2721089..2722103 -
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