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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2822559..2824204+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005468-T1 ID=KJC3_005468-T1|Name=KJC3_005468-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1646bp|location=Sequence derived from alignment at ch4:2822559..2824204+ (Aspergillus niger KJC3)
CCAAATTTGAAGACAAGACGGCGCTTTCCTCTCTTTATATATTCACTATC
GGGGTTTGAAGAGATAGTTTTTGGATGTGCTACCTATATTAGTATGATAT
AAATATCATTACTTCCCTACTTTTACCCTTCCACCTTTGCTTCAGTGCCA
CGGTCCGACAGCATGCCTCCCAACACCGGAAAAGCAATCGGCGATCCCAG
CGACGATGCCTACGTTGCACAGGTGCTCGCACGAGAGGCACGAGACAGCT
CTCTGAGATACTCGGCACATGGATTGGAAGCATACATGCCCAAGAGGTAC
CAAAACATTCTCTACCGGAGACACCACGACGGTCAATGAGCTGACGTATT
ATTGCTTCAGGCCTACAGGTGCCGCTCCTAAACCAAACACACGATTCCTC
CGACATATAATCCGAGAGACGGACAATCACAATACAGCATTGAAACGGAA
AGAAGAACGGGAGGCCAGGGAGCGAATGCGACAGTTGCGTAACCAGGCGT
CATCCTCTTCTGCGAACGATGCGGACCGCGATCAACGTCGCAGTCGGCGT
ACATCAACCGATCGAGAATCGCGACGCGATAGAAGACGGCATCGTGAGGA
CAAATATGGCCCTAGTCGAAGGAAACATAGAAGTCGCTCTGCATCGGTGG
AGAGAGATCAATCGCATAGGAGCCGACGGAGGCGTGACGGTCAAGATACT
AATGACGACCGGCATAGATCCTCTAGAAGGAGCCGTCGCAATCGGTCCTA
TTCTCGGTCCAGGAGTCGATCACCGGAAGATGGTCGGGATGTTGATTCTC
ACAGTCGTCGCCGACGGTATCGCAGCCGCTATGAATCGTCGCGATCACGT
TCGCGGTCCCTAGGGGCATCTGACAGGCGCAGGACTAGAGATAGCGAGCG
CAGGAGTCACCGCAGTTCTCGTGAGAAGGAACAATCTAGAGAAAAGAATA
CATCGACAAGCAAAGAACCATTCTCGACTCATGGGCCATCCAAGGAAGAA
ACGCCTTTGGATGACGAGTCGGATCCTCTTGAAGACCTTGTCGGACCCCT
ACCGGCGAAAGACAATGATCATGGGTATTCTGCGCCGATTCGTTCCCGCG
GTCGCGGTGCCTACAAGCCCAACATGAGCAACATCGATGCACACTTTGCC
CCTGACTACGACCCCACTACGGATGTACATTTGGAGGAGGATGATGGGCA
GGCGGGTAGCAGGCCTACCCGCCGTCCCGTCGCTGGTTTAATGACTGGAG
ATGACGACTGGGAACTTTCTCTGGAAGCTTTGCGTGATCGGGCAAAATGG
AAGCAGAGGGGCGAGGAGAGGTTGCGGGAAGCTGGTTTCAGTAACGAATT
TGTGGACCGGTGGAAGAGCAACACCACCTCCACGCCAGGAGATGATTCGG
AAGGCAGGCTAGAGGATGTGAAGTGGTCGAAGAAGGGCGAGGGGCGAGAG
TGGGATCGGGGCAAGTTTGTTGATCAGGATGGGCAGATTGACGTTAAAGC
TTCCTGGTGACCTTAGATTTTGGAAGTTCTTGGATACCTATCATATTGCA
ACTCACAGCTGCCTGGCGTTATATAGATAATTTTCTTGCAATGATATCCA
CTGGTACGGGCTAGTAGCTTGTATCTGTTCTTTGAGCATCGATAAA back to topCoding sequence (CDS) from alignment at ch4:2822559..2824204+ >KJC3_005468-T1 ID=KJC3_005468-T1|Name=KJC3_005468-T1|organism=Aspergillus niger KJC3|type=CDS|length=2568bp|location=Sequence derived from alignment at ch4:2822559..2824204+ (Aspergillus niger KJC3)
ATGCCTCCCAACACCGGAAAAGCAATCGGCGATCCCAGCGACGATGCCTA
CGTTGCACAGGTGCTCGCACGAGAGGCACGAGACAGCTCTCTGAGATACT
CGGCACATGGATTGGAAGCATACATGCCCAAGAGGCCTACAGGTGCCGCT
CCTAAACCAAACACACGATTCCTCCGACATATAATCCGAGAGACGGACAA
TCACAATACAGCATTGAAACGGAAAGAAGAACGGGAGGCCAGGGAGCGAA
TGCGACAGTTGCGTAACCAGGCGTCATCCTCTTCTGCGAACGATGCGGAC
CGCGATCAACGTCGCAGTCGGCGTACATCAACCGATCGAGAATCGCGACG
CGATAGAAGACGGCATCGTGAGGACAAATATGGCCCTAGTCGAAGGAAAC
ATAGAAGTCGCTCTGCATCGGTGGAGAGAGATCAATCGCATAGGAGCCGA
CGGAGGCGTGACGGTCAAGATACTAATGACGACCGGCATAGATCCTCTAG
AAGGAGCCGTCGCAATCGGTCCTATTCTCGGTCCAGGAGTCGATCACCGG
AAGATGGTCGGGATGTTGATTCTCACAGTCGTCGCCGACGGTATCGCAGC
CGCTATGAATCGTCGCGATCACGTTCGCGGTCCCTAGGGGCATCTGACAG
GCGCAGGACTAGAGATAGCGAGCGCAGGAGTCACCGCAGTTCTCGTGAGA
AGGAACAATCTAGAGAAAAGAATACATCGACAAGCAAAGAACCATTCTCG
ACTCATGGGCCATCCAAGGAAGAAACGCCTTTGGATGACGAGTCGGATCC
TCTTGAAGACCTTGTCGGACCCCTACCGGCGAAAGACAATGATCATGGGT
ATTCTGCGCCGATTCGTTCCCGCGGTCGCGGTGCCTACAAGCCCAACATG
AGCAACATCGATGCACACTTTGCCCCTGACTACGACCCCACTACGGATGT
ACATTTGGAGGAGGATGATGGGCAGGCGGGTAGCAGGCCTACCCGCCGTC
CCGTCGCTGGTTTAATGACTGGAGATGACGACTGGGAACTTTCTCTGGAA
GCTTTGCGTGATCGGGCAAAATGGAAGCAGAGGGGCGAGGAGAGGTTGCG
GGAAGCTGGTTTCAGTAACGAATTTGTGGACCGGTGGAAGAGCAACACCA
CCTCCACGCCAGGAGATGATTCGGAAGGCAGGCTAGAGGATGTGAAGTGG
TCGAAGAAGGGCGAGGGGCGAGAGTGGGATCGGGGCAAGTTTGTTGATCA
GGATGGGCAGATTGACGTTAAAGCTTCCTGGTGAATGCCTCCCAACACCG
GAAAAGCAATCGGCGATCCCAGCGACGATGCCTACGTTGCACAGGTGCTC
GCACGAGAGGCACGAGACAGCTCTCTGAGATACTCGGCACATGGATTGGA
AGCATACATGCCCAAGAGGCCTACAGGTGCCGCTCCTAAACCAAACACAC
GATTCCTCCGACATATAATCCGAGAGACGGACAATCACAATACAGCATTG
AAACGGAAAGAAGAACGGGAGGCCAGGGAGCGAATGCGACAGTTGCGTAA
CCAGGCGTCATCCTCTTCTGCGAACGATGCGGACCGCGATCAACGTCGCA
GTCGGCGTACATCAACCGATCGAGAATCGCGACGCGATAGAAGACGGCAT
CGTGAGGACAAATATGGCCCTAGTCGAAGGAAACATAGAAGTCGCTCTGC
ATCGGTGGAGAGAGATCAATCGCATAGGAGCCGACGGAGGCGTGACGGTC
AAGATACTAATGACGACCGGCATAGATCCTCTAGAAGGAGCCGTCGCAAT
CGGTCCTATTCTCGGTCCAGGAGTCGATCACCGGAAGATGGTCGGGATGT
TGATTCTCACAGTCGTCGCCGACGGTATCGCAGCCGCTATGAATCGTCGC
GATCACGTTCGCGGTCCCTAGGGGCATCTGACAGGCGCAGGACTAGAGAT
AGCGAGCGCAGGAGTCACCGCAGTTCTCGTGAGAAGGAACAATCTAGAGA
AAAGAATACATCGACAAGCAAAGAACCATTCTCGACTCATGGGCCATCCA
AGGAAGAAACGCCTTTGGATGACGAGTCGGATCCTCTTGAAGACCTTGTC
GGACCCCTACCGGCGAAAGACAATGATCATGGGTATTCTGCGCCGATTCG
TTCCCGCGGTCGCGGTGCCTACAAGCCCAACATGAGCAACATCGATGCAC
ACTTTGCCCCTGACTACGACCCCACTACGGATGTACATTTGGAGGAGGAT
GATGGGCAGGCGGGTAGCAGGCCTACCCGCCGTCCCGTCGCTGGTTTAAT
GACTGGAGATGACGACTGGGAACTTTCTCTGGAAGCTTTGCGTGATCGGG
CAAAATGGAAGCAGAGGGGCGAGGAGAGGTTGCGGGAAGCTGGTTTCAGT
AACGAATTTGTGGACCGGTGGAAGAGCAACACCACCTCCACGCCAGGAGA
TGATTCGGAAGGCAGGCTAGAGGATGTGAAGTGGTCGAAGAAGGGCGAGG
GGCGAGAGTGGGATCGGGGCAAGTTTGTTGATCAGGATGGGCAGATTGAC
GTTAAAGCTTCCTGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005468-T1.utr5p1 | KJC3_005468-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005468-T1.utr3p1 | KJC3_005468-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2822559..2824204 + |
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