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KJC3_005469-T1, KJC3_005469-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005469-T1
Unique NameKJC3_005469-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2824838..2826081+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005469-T1 ID=KJC3_005469-T1|Name=KJC3_005469-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1244bp|location=Sequence derived from alignment at ch4:2824838..2826081+ (Aspergillus niger KJC3)
GTGATATTACTGCACTTCAGTTGCTATCGGACAACATCGAGGATATTAAG
GAACAATTGATTGTACGTTGCAGTTTAGACCAAAGACAGATTAAATCAGC
AGTTGAGTGAAATACTGCTTTGAATCAACGTTGCACACGCGGAGCAGGCG
CATCTCACTTGTGTATCTCCGACGAAGCTTGAGCTCAATGACGGATCAGT
TTGCATATTCGTATCCCTCGCCTCTAGAGGGGTATGAAAACCTAGAACCG
CTGCCTGAGTAAGTGAGGTGGTCTGCCGGACCAGATAGTCGAATGGATGA
AAGGTTATTTTACGCATTGAGCCTAACCCATGGCATAATACAGTGAGAGA
AACGAGGATGGGAAGTCCCTCAGAAACCCCCAACATGGTGTTCTGAGTAA
AGCTTACGAGGAGTTCCCGGACCCTCTCACCAAAGGTCGTCGTGGGGGCT
TCGACATTCATATTTATCACTTCCAGGTTGGTGGAAACTTGTGTACTAGG
CCATCGTAGATTCTTGGCTGACTTTGCATCGTCAAAGAACAACCCTGATC
AGGTCGCTTTTGCAAAAGCTCTGTGGGAGAGAATTAGGCGTGAATGTGAG
CATTTATCCCCTTAGATATCAGGTTGAATATCGTGTTGTAACAATACTAA
CTTGAGTAGTTCCCGAGTTACGGATTTATCAGTTCTTCGACAGGCCAATA
GGGCCTCATCCTGTGGCCATGTTCGAAGTCAACCTTTTCACTCCTGCGCA
ATTTGGCGCCTTTGTGCCCTGGCTTGTTGTCAATAGGGGACCCTTGAGTG
CACTGATCCATCCGAATACGGTGGAGACCGAGGAAGAGCGAAACCACACC
CAACGTGCTACATGGCTGGGTGAAAGAATACCTCTCGATTTACGGTTATT
CAAGCTGATGAAAGAGGCACAAAAGAGTAAGGAGCTCGAAGCGGAGAAGG
CAGCGGCAGGGGAGAAGTTATGATTGCGGTGCTCTGTTGATCCGTGCTCG
ACTTCGGTATTATGTTGGCTTCTATGTAATTAGTAGTATTGCTTCGAATG
ACTTCGACTTTTCGAACCCGGCATGGATGCTAAGAAGGCTTGTTTGTTTA
TGATATCCAATAACATGTTAGCACACGAGCATTCTCTGGACCTGAGCGAC
ATAAGGGTACTGATAAGGCTAGAAAAGCATTTGCAGGAATTATGAGCCAG
TATACACACAAGAAACCCGAATAAACCCACTCAGTGAGGTAATT
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Coding sequence (CDS) from alignment at ch4:2824838..2826081+

>KJC3_005469-T1 ID=KJC3_005469-T1|Name=KJC3_005469-T1|organism=Aspergillus niger KJC3|type=CDS|length=2304bp|location=Sequence derived from alignment at ch4:2824838..2826081+ (Aspergillus niger KJC3)
ATGACGGATCAGTTTGCATATTCGTATCCCTCGCCTCTAGAGGGGTATGA
AAACCTAGAACCGCTGCCTGATGAGAGAAACGAGGATGGGAAGTCCCTCA
GAAACCCCCAACATGGTGTTCTGAGTAAAGCTTACGAGGAGTTCCCGGAC
CCTCTCACCAAAGGTCGTCGTGGGGGCTTCGACATTCATATTTATCACTT
CCAGAACAACCCTGATCAGGTCGCTTTTGCAAAAGCTCTGTGGGAGAGAA
TTAGGCGTGAATTTCCCGAGTTACGGATTTATCAGTTCTTCGACAGGCCA
ATAGGGCCTCATCCTGTGGCCATGTTCGAAGTCAACCTTTTCACTCCTGC
GCAATTTGGCGCCTTTGTGCCCTGGCTTGTTGTCAATAGGGGACCCTTGA
GTGCACTGATCCATCCGAATACGGTGGAGACCGAGGAAGAGCGAAACCAC
ACCCAACGTGCTACATGGCTGGGTGAAAGAATACCTCTCGATTTACGGTT
ATTCAAGCTGATGAAAGAGGCACAAAAGAGTAAGGAGCTCGAAGCGGAGA
AGGCAGCGGCAGGGGAGAAGTTATGAATGACGGATCAGTTTGCATATTCG
TATCCCTCGCCTCTAGAGGGGTATGAAAACCTAGAACCGCTGCCTGATGA
GAGAAACGAGGATGGGAAGTCCCTCAGAAACCCCCAACATGGTGTTCTGA
GTAAAGCTTACGAGGAGTTCCCGGACCCTCTCACCAAAGGTCGTCGTGGG
GGCTTCGACATTCATATTTATCACTTCCAGAACAACCCTGATCAGGTCGC
TTTTGCAAAAGCTCTGTGGGAGAGAATTAGGCGTGAATTTCCCGAGTTAC
GGATTTATCAGTTCTTCGACAGGCCAATAGGGCCTCATCCTGTGGCCATG
TTCGAAGTCAACCTTTTCACTCCTGCGCAATTTGGCGCCTTTGTGCCCTG
GCTTGTTGTCAATAGGGGACCCTTGAGTGCACTGATCCATCCGAATACGG
TGGAGACCGAGGAAGAGCGAAACCACACCCAACGTGCTACATGGCTGGGT
GAAAGAATACCTCTCGATTTACGGTTATTCAAGCTGATGAAAGAGGCACA
AAAGAGTAAGGAGCTCGAAGCGGAGAAGGCAGCGGCAGGGGAGAAGTTAT
GAATGACGGATCAGTTTGCATATTCGTATCCCTCGCCTCTAGAGGGGTAT
GAAAACCTAGAACCGCTGCCTGATGAGAGAAACGAGGATGGGAAGTCCCT
CAGAAACCCCCAACATGGTGTTCTGAGTAAAGCTTACGAGGAGTTCCCGG
ACCCTCTCACCAAAGGTCGTCGTGGGGGCTTCGACATTCATATTTATCAC
TTCCAGAACAACCCTGATCAGGTCGCTTTTGCAAAAGCTCTGTGGGAGAG
AATTAGGCGTGAATTTCCCGAGTTACGGATTTATCAGTTCTTCGACAGGC
CAATAGGGCCTCATCCTGTGGCCATGTTCGAAGTCAACCTTTTCACTCCT
GCGCAATTTGGCGCCTTTGTGCCCTGGCTTGTTGTCAATAGGGGACCCTT
GAGTGCACTGATCCATCCGAATACGGTGGAGACCGAGGAAGAGCGAAACC
ACACCCAACGTGCTACATGGCTGGGTGAAAGAATACCTCTCGATTTACGG
TTATTCAAGCTGATGAAAGAGGCACAAAAGAGTAAGGAGCTCGAAGCGGA
GAAGGCAGCGGCAGGGGAGAAGTTATGAATGACGGATCAGTTTGCATATT
CGTATCCCTCGCCTCTAGAGGGGTATGAAAACCTAGAACCGCTGCCTGAT
GAGAGAAACGAGGATGGGAAGTCCCTCAGAAACCCCCAACATGGTGTTCT
GAGTAAAGCTTACGAGGAGTTCCCGGACCCTCTCACCAAAGGTCGTCGTG
GGGGCTTCGACATTCATATTTATCACTTCCAGAACAACCCTGATCAGGTC
GCTTTTGCAAAAGCTCTGTGGGAGAGAATTAGGCGTGAATTTCCCGAGTT
ACGGATTTATCAGTTCTTCGACAGGCCAATAGGGCCTCATCCTGTGGCCA
TGTTCGAAGTCAACCTTTTCACTCCTGCGCAATTTGGCGCCTTTGTGCCC
TGGCTTGTTGTCAATAGGGGACCCTTGAGTGCACTGATCCATCCGAATAC
GGTGGAGACCGAGGAAGAGCGAAACCACACCCAACGTGCTACATGGCTGG
GTGAAAGAATACCTCTCGATTTACGGTTATTCAAGCTGATGAAAGAGGCA
CAAAAGAGTAAGGAGCTCGAAGCGGAGAAGGCAGCGGCAGGGGAGAAGTT
ATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005469KJC3_005469Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005469-T1KJC3_005469-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005469-T1.utr5p1KJC3_005469-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005469-T1.exon1KJC3_005469-T1.exon1Aspergillus niger KJC3exon
KJC3_005469-T1.exon2KJC3_005469-T1.exon2Aspergillus niger KJC3exon
KJC3_005469-T1.exon3KJC3_005469-T1.exon3Aspergillus niger KJC3exon
KJC3_005469-T1.exon4KJC3_005469-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005469-T1.cdsKJC3_005469-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005469-T1.utr3p1KJC3_005469-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023389
DBxrefInterPro:IPR014980
DBxrefPFAM:PF08883
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2824838..2826081 +
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