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KJC3_005476-T1, KJC3_005476-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005476-T1
Unique NameKJC3_005476-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2849189..2851159+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005476-T1 ID=KJC3_005476-T1|Name=KJC3_005476-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1971bp|location=Sequence derived from alignment at ch4:2849189..2851159+ (Aspergillus niger KJC3)
CAAGTGCCAACTCTGCTATCCGACTTCGGTTCCATGGGTCAGAAACAAAA
CAAACAACAAGCGAGCATCCACATCTGAAGATTCTTAGAATACTATCTAG
GTAGCCCCAGTCCGACCAAGACACAGCCTCGCCTAACAAATCAGATTTTC
GCAGACTATGAACGTCATCCTTTTCCTCCCCACAGGGGCTCCCAAACCTG
ACGACATCCACAGGGCCAAAAGAGTCTGACAATCGATAGTCGGCCGCGTG
GTGGTCTCAGAAAGCAATAGTGCGACGATCGTTACATCACCGGGACAAAC
AACATCCCTCGCTCGGGTACCTGGCGAACGGTGTATCCGCATTGCGGAGG
CTTGTAGCCACTCAAATGGGTCCTCCCAAGACCAACACGACAGCAACGAT
GATGAAACATCGCCCCCAAGACAGCAAGGGATCGGCCATAACGCGCGGGA
CGTGGAGCCGAGCGAACCATTTTGGAATCCGGAGAATCAGATGGGCGTTC
GTTCACGCGATCTTCAGATCGGCATTCTACTGCGTTTCACACGCCGATTT
CTGTGTCAAGTTCGGGTGTTCCAAAATCCCAAGGGGTTGGGTCGGGTGCC
AACCATCCCTAACGATGGGATAATCGGATGGATCATATTTAGGTTATGCC
TGCCAGTGAGTTCTGCTGATATCAGATGTTTCATCTCGTTCTTTTATTAC
TTTTCTCTCGTTTTTTCTTGCCGGTATATAACTACATACATACATACATA
CAAAATCCCACTCGTTCGCTCATTTGAAGAAAACCGAAAAGGAAAAATAA
CCTCAAAACTTCCATTCTTTCATCACAATGCCTAAAGCTAGTGCCACCAA
GATCATTTCCCTTTCTATCTTCTCCCTTCTCACCACCGCTTCTGCCTACA
CAATCGTAGGCTGCTATAGCAGTCCCGGCCAGCTAACCTCAGCGGGCACC
TTTCAATTCCAATCCGAAGGCTACTGCCAGCAAATTTGCACGAAGCAAAA
CAAGCCCATCTTCGCCCTCTACAACGGCGACGAATGCTACTGCGGCGATG
CATTGCCCCCTTCAACAGCCAAGGTCTCTTCCACACAATGTCAAACCCCT
TGCTCCGGATTTCCATCTGATCCTTGTACGTATACTCCCATAAGGCCCTC
GTTAGTCAGCCCAACAGGACCCCATACTAATGCATAAATCACTATAGGCG
GCGGCACCAATGCATGGCTAATCAACAACTCCACCACCATCTCGCAGCCC
ACAACCGACAACAACATCGTCACAGAACTGAAACGTGAATCCACAGACAA
TGTCGAGAATGGCATCGTGATTGCCCCGGAGTCCGATGACTCCGACTCAT
CATCAGGCAACTCCAACTCTCCTGAGACCATGACAGTCAATCCTACCATG
GTGGAGACCGGCATCCCTATCGCCCCCAGCTCCGGTGCAGACGGAGGCGC
AGCTAAATCTACCATCCCGAGTGTAATTCTTACGGCGCCGTCCATGACGG
GCGTCACTGTTCCGGCTACTGGTGCTGCTGCGGCGTCGTCTATGGTTGTT
GCGGCGTCGTCTGCTTCGGCGTCTGCCACGGCTGCTGCATCCGGAGCGGC
GAGCAGTGGTTCGGCCGCCGCGAGCCCATCAACTAGTGCGGGTGCCGCTG
CTGCTGTCGCTGGTGCTCCTGCTGGTGGGATGATCGGGGGTGTGGTTATG
GCGGCAATTGTTGCGCTCGGACTGTAGATATGTCTTTCTACATCCTACAT
TCTAAGCGGATGGAGTGGATGGATGGATGGACTGATTGATTCAAGCGGGG
ATGATTCATCATGTATAAATAGCTACGGATGTACGGTATGGGTACAGGGC
TAGGCATTGAAGGTACTTACCTATAATAGGCTGGAGTTAATCGCGGGTTC
GATGCGACATGTACTTTTGCTTCTGCTGAGCAGAAAGTGAATTTCCCAGT
GATAGTCACTCTTGTTTTAAG
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Coding sequence (CDS) from alignment at ch4:2849189..2851159+

>KJC3_005476-T1 ID=KJC3_005476-T1|Name=KJC3_005476-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch4:2849189..2851159+ (Aspergillus niger KJC3)
ATGCCTGCCAGCTACTGCCAGCAAATTTGCACGAAGCAAAACAAGCCCAT
CTTCGCCCTCTACAACGGCGACGAATGCTACTGCGGCGATGCATTGCCCC
CTTCAACAGCCAAGGTCTCTTCCACACAATGTCAAACCCCTTGCTCCGGA
TTTCCATCTGATCCTTGCGGCGGCACCAATGCATGGCTAATCAACAACTC
CACCACCATCTCGCAGCCCACAACCGACAACAACATCGTCACAGAACTGA
AACGTGAATCCACAGACAATGTCGAGAATGGCATCGTGATTGCCCCGGAG
TCCGATGACTCCGACTCATCATCAGGCAACTCCAACTCTCCTGAGACCAT
GACAGTCAATCCTACCATGGTGGAGACCGGCATCCCTATCGCCCCCAGCT
CCGGTGCAGACGGAGGCGCAGCTAAATCTACCATCCCGAGTGTAATTCTT
ACGGCGCCGTCCATGACGGGCGTCACTGTTCCGGCTACTGGTGCTGCTGC
GGCGTCGTCTATGGTTGTTGCGGCGTCGTCTGCTTCGGCGTCTGCCACGG
CTGCTGCATCCGGAGCGGCGAGCAGTGGTTCGGCCGCCGCGAGCCCATCA
ACTAGTGCGGGTGCCGCTGCTGCTGTCGCTGGTGCTCCTGCTGGTGGGAT
GATCGGGGGTGTGGTTATGGCGGCAATTGTTGCGCTCGGACTGTAGATGC
CTGCCAGCTACTGCCAGCAAATTTGCACGAAGCAAAACAAGCCCATCTTC
GCCCTCTACAACGGCGACGAATGCTACTGCGGCGATGCATTGCCCCCTTC
AACAGCCAAGGTCTCTTCCACACAATGTCAAACCCCTTGCTCCGGATTTC
CATCTGATCCTTGCGGCGGCACCAATGCATGGCTAATCAACAACTCCACC
ACCATCTCGCAGCCCACAACCGACAACAACATCGTCACAGAACTGAAACG
TGAATCCACAGACAATGTCGAGAATGGCATCGTGATTGCCCCGGAGTCCG
ATGACTCCGACTCATCATCAGGCAACTCCAACTCTCCTGAGACCATGACA
GTCAATCCTACCATGGTGGAGACCGGCATCCCTATCGCCCCCAGCTCCGG
TGCAGACGGAGGCGCAGCTAAATCTACCATCCCGAGTGTAATTCTTACGG
CGCCGTCCATGACGGGCGTCACTGTTCCGGCTACTGGTGCTGCTGCGGCG
TCGTCTATGGTTGTTGCGGCGTCGTCTGCTTCGGCGTCTGCCACGGCTGC
TGCATCCGGAGCGGCGAGCAGTGGTTCGGCCGCCGCGAGCCCATCAACTA
GTGCGGGTGCCGCTGCTGCTGTCGCTGGTGCTCCTGCTGGTGGGATGATC
GGGGGTGTGGTTATGGCGGCAATTGTTGCGCTCGGACTGTAGATGCCTGC
CAGCTACTGCCAGCAAATTTGCACGAAGCAAAACAAGCCCATCTTCGCCC
TCTACAACGGCGACGAATGCTACTGCGGCGATGCATTGCCCCCTTCAACA
GCCAAGGTCTCTTCCACACAATGTCAAACCCCTTGCTCCGGATTTCCATC
TGATCCTTGCGGCGGCACCAATGCATGGCTAATCAACAACTCCACCACCA
TCTCGCAGCCCACAACCGACAACAACATCGTCACAGAACTGAAACGTGAA
TCCACAGACAATGTCGAGAATGGCATCGTGATTGCCCCGGAGTCCGATGA
CTCCGACTCATCATCAGGCAACTCCAACTCTCCTGAGACCATGACAGTCA
ATCCTACCATGGTGGAGACCGGCATCCCTATCGCCCCCAGCTCCGGTGCA
GACGGAGGCGCAGCTAAATCTACCATCCCGAGTGTAATTCTTACGGCGCC
GTCCATGACGGGCGTCACTGTTCCGGCTACTGGTGCTGCTGCGGCGTCGT
CTATGGTTGTTGCGGCGTCGTCTGCTTCGGCGTCTGCCACGGCTGCTGCA
TCCGGAGCGGCGAGCAGTGGTTCGGCCGCCGCGAGCCCATCAACTAGTGC
GGGTGCCGCTGCTGCTGTCGCTGGTGCTCCTGCTGGTGGGATGATCGGGG
GTGTGGTTATGGCGGCAATTGTTGCGCTCGGACTGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005476KJC3_005476Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005476-T1KJC3_005476-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005476-T1.utr5p1KJC3_005476-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005476-T1.utr5p2KJC3_005476-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005476-T1.exon1KJC3_005476-T1.exon1Aspergillus niger KJC3exon
KJC3_005476-T1.exon2KJC3_005476-T1.exon2Aspergillus niger KJC3exon
KJC3_005476-T1.exon3KJC3_005476-T1.exon3Aspergillus niger KJC3exon
KJC3_005476-T1.exon4KJC3_005476-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005476-T1.cdsKJC3_005476-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005476-T1.utr3p1KJC3_005476-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002889
DBxrefPFAM:PF01822
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2849189..2851159 +
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