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KJC3_005478-T1, KJC3_005478-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005478-T1
Unique NameKJC3_005478-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2852881..2855330-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005478-T1 ID=KJC3_005478-T1|Name=KJC3_005478-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2450bp|location=Sequence derived from alignment at ch4:2852881..2855330- (Aspergillus niger KJC3)
CATATCTCACCATGGGTCTGCGACGCAGCTGTGTCTTCTGTCGTACTCGT
AAGATTCGATGTTCCGGTGAATCCATATGCAGTGCCTGTCGGAAGCGCAA
CCTTAGCTGCGAATATAGCCTGGAAGCTCGAAAGGGACGGCCCGCGCAGA
GAGGAACAACAACATCACAGCCTCCATTGACGTCGGAACTACATACTAAC
AATGGAAGCGATAATTCGTCGCCATTGCAGTCGGGGGCATCTGCAGAGAA
TTCCTTGGCACCCGACTCGGCAGCCCATGGCCACGAGGATTCTGCAACCA
GCTCCGACCTGAATATTCATGTTGGCGATGAGCTGGACCGGAGATTCGAT
GCCTACTTTATCACGAAAACTGACTCGGGCTCTAATCTCTTTCAAACTGC
AATTGCCACCTATCAGCGGGAATTGGACAAGTCGCCTCGGAAACCCCCAT
TTCGTCCAATACAGCTTCCTTTGACCTATGATGGGCTGCTGTCCTTTATG
GCGTCGGAGATGGTGGGCATCCTGCCGCTCCGTTTTAGTTTCCTGGGAGT
TCAGCAATTGGAGGCTCCGAATCAGAATTTTTATGTGTCAACCTTGGCAG
CGGACACCACGCGTACGATGTTCGACAGTCTCGAGTTTGATGTCGATCCT
TTGATGGCGCTGGGAAAGCACCTGATCATTCAGCTGGTTGATGTGTGGTT
TTCGGCCCATCCATTGTCACCTTTGGTCTCTAAAACGCTGCTAATCACGG
CAATCCAGGATGATACAGTGGATAAGGCCCTTCTAGCAGTCATATTGGCT
GATGCATGTGATATACAGCCTATCGTGAGCAAGCTGCATGAAGATATTCC
AAATGATCCTCAGACACTCTACAACTTTGCTATCTTGCAGCTGAAGCAGC
GCACGGTGGTGCTTGGACACTCCTCGGTTCTTTCTACAGCTCAGGCACTG
TTTCTGGTAGGATGGAGGGAGTTGTGCCTCGGCCATGCCCGACGCGCTAC
CTGCTTCACAGGCTATGCCTGCCGTACAATTGCCACTTTGTACACCTTTT
GGCAGGCTGATAATTGCAGGAAGTGTGGCAGAAAGCTTAATGGCGTGGAT
ATAGGTATCGTCGAGCAAGAATTGGCACAGAACATTTACTGGCTCTGCTT
GGCCACCACAACATGGGTGTTCATGCAAAGCAATCAGCCATTCTCGTTGC
TCACTCCGGAAACGACGCCCGACTTCCCGTGCCTGGATGAGGCAGCTTCA
GCCATTCTCCACTTAGACCGCGAATCGGGAAACATCTCCACGCTACAGGC
CCAATTCCAGGCTACTCGGTGTCTGTGGCCACTCAGTCACATCACCAGTA
CAGTGGCCCATATCTACACGCTGTATCTCAATGCGCCTACAGAGAATAAA
GAAGAGCAAGCTGTGCCATGGCAAAAACAGCATCTTCACGAGTTACACCA
ACTTTTTCAGCCTTGCTATGATCGATCTGTTTTGGCGTCGAGGATGCATA
GGATCCTCCTCCATGCCATCGAACTCGTGGAGAGCCAGGTCACCATAGTA
TCTTCACGGTCTTTGCTATTGAATGCGTACCATAGTATTGCTATTCACAT
GCTTTTTTCTGGAGACAAAAGGGGTCAAGAGCGGCCGATGATCTCGCAAT
CAGTCATGGACTCATTTTGTCTGTCGGCTTCTGCACTTCTTGCTATTACT
CGACAAAGCCATTTCCAAGTGACTAGTCTGATGCCTACGCAAGAGCTTCG
AGGCGTCAATGGATCCAAAATAATGCTATATGCTCTAGACACTTGCAGCA
GGGGATTTTCGTACATATATGCGAAACACGAGCGTGGATCGATTGAGGAG
CGCAATATGATCAGCTTAAGACAAAGCCAGCTAGTCCATATTGCCAACCA
GCTGCATCAAGCCTGTAAAGGCGATGTAGTGTCTCGGCTTGGAGCAGCGT
TACTGCCGGTGAAGAAGAGATTGAAGCGTGCGAAACAAGCCTTTCAGCAT
CTTGAATCAACCTCCGTTCCCCAATCAGCACTGCTTTCTGGTCAGAACGA
GCAGAACCCATTGAGTAACTCGTCTCCTGCAAGTGATCTTCTAATGGACC
TGGGCTTCAGCATGAACCAGATGGCAGACCCGTCTCTTGCTCCTGATTAC
TCCGAGCCTTTGCCACTCATGGCAATCGATCAAACCTGGCCGCTGTCTGG
GAACCCTTGTGAGATATACGATCCAGGCTTCTTCCTAGACGGACCGATCA
CAGGGTCACTTCTGGGGTTTCCCGGCCTTGCCAAAATGAACATGCAACTT
CAGGATTACGTATCTCTAGACGAAAGCGACCCGAACCAGGACGCGCTTGC
TCTCTTAAGTCAAGGCACGAGTGGCATTTCGTTTGATGAACCGAACGTCC
AAAGCACTCATGTCAACCCTCCGGACACTGAATACAGTGCTTTTCCATAA
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Coding sequence (CDS) from alignment at ch4:2852881..2855330-

>KJC3_005478-T1 ID=KJC3_005478-T1|Name=KJC3_005478-T1|organism=Aspergillus niger KJC3|type=CDS|length=4746bp|location=Sequence derived from alignment at ch4:2852881..2855330- (Aspergillus niger KJC3)
GATGATACAGTGGATAAGGCCCTTCTAGCAGTCATATTGGCTGATGCATG
TGATATACAGCCTATCGTGAGCAAGCTGCATGAAGATATTCCAAATGATC
CTCAGACACTCTACAACTTTGCTATCTTGCAGCTGAAGCAGCGCACGGTG
GTGCTTGGACACTCCTCGGTTCTTTCTACAGCTCAGGCACTGTTTCTGGT
AGGATGGAGGGAGTTGTGCCTCGGCCATGCCCGACGCGCTACCTGCTTCA
CAGGCTATGCCTGCCGTACAATTGCCACTTTGTACACCTTTTGGCAGGCT
GATAATTGCAGGAAGTGTGGCAGAAAGCTTAATGGCGTGGATATAGGTAT
CGTCGAGCAAGAATTGGCACAGAACATTTACTGGCTCTGCTTGGCCACCA
CAACATGGGTGTTCATGCAAAGCAATCAGCCATTCTCGTTGCTCACTCCG
GAAACGACGCCCGACTTCCCGTGCCTGGATGAGGCAGCTTCAGCCATTCT
CCACTTAGACCGCGAATCGGGAAACATCTCCACGCTACAGGCCCAATTCC
AGGCTACTCGGTGTCTGTGGCCACTCAGTCACATCACCAGTACAGTGGCC
CATATCTACACGCTGTATCTCAATGCGCCTACAGAGAATAAAGAAGAGCA
AGCTGTGCCATGGCAAAAACAGCATCTTCACGAGTTACACCAACTTTTTC
AGCCTTGCTATGATCGATCTGTTTTGGCGTCGAGGATGCATAGGATCCTC
CTCCATGCCATCGAACTCGTGGAGAGCCAGGTCACCATAGTATCTTCACG
GTCTTTGCTATTGAATGCGTACCATAGTATTGCTATTCACATGCTTTTTT
CTGGAGACAAAAGGGGTCAAGAGCGGCCGATGATCTCGCAATCAGTCATG
GACTCATTTTGTCTGTCGGCTTCTGCACTTCTTGCTATTACTCGACAAAG
CCATTTCCAAGTGACTAGTCTGATGCCTACGCAAGAGCTTCGAGGCGTCA
ATGGATCCAAAATAATGCTATATGCTCTAGACACTTGCAGCAGGGGATTT
TCGTACATATATGCGAAACACGAGCGTGGATCGATTGAGGAGCGCAATAT
GATCAGCTTAAGACAAAGCCAGCTAGTCCATATTGCCAACCAGCTGCATC
AAGCCTGTAAAGGCGATGTAGTGTCTCGGCTTGGAGCAGCGTTACTGCCG
GTGAAGAAGAGATTGAAGCGTGCGAAACAAGCCTTTCAGCATCTTGAATC
AACCTCCGTTCCCCAATCAGCACTGCTTTCTGGTCAGAACGAGCAGAACC
CATTGAGTAACTCGTCTCCTGCAAGTGATCTTCTAATGGACCTGGGCTTC
AGCATGAACCAGATGGCAGACCCGTCTCTTGCTCCTGATTACTCCGAGCC
TTTGCCACTCATGGCAATCGATCAAACCTGGCCGCTGTCTGGGAACCCTT
GTGAGATATACGATCCAGGCTTCTTCCTAGACGGACCGATCACAGGGTCA
CTTCTGGGGTTTCCCGGCCTTGCCAAAATGAACATGCAACTTCAGGATTA
CGTATCTCTAGACGAAAGCGACCCGAACCAGGACGCGCTTGCTCTCTTAA
GTCAAGGCACGAGTGGCATTTCGTTTGATGAACCGAACGTCCAAAGCACT
CATGTCAACCCTCCGGACACTGAATACAGTGCTTTTCCATAAATGGGTCT
GCGACGCAGCTGTGTCTTCTGTCGTACTCGTAAGATTCGATGTTCCGGTG
AATCCATATGCAGTGCCTGTCGGAAGCGCAACCTTAGCTGCGAATATAGC
CTGGAAGCTCGAAAGGGACGGCCCGCGCAGAGAGGAACAACAACATCACA
GCCTCCATTGACGTCGGAACTACATACTAACAATGGAAGCGATAATTCGT
CGCCATTGCAGTCGGGGGCATCTGCAGAGAATTCCTTGGCACCCGACTCG
GCAGCCCATGGCCACGAGGATTCTGCAACCAGCTCCGACCTGAATATTCA
TGTTGGCGATGAGCTGGACCGGAGATTCGATGCCTACTTTATCACGAAAA
CTGACTCGGGCTCTAATCTCTTTCAAACTGCAATTGCCACCTATCAGCGG
GAATTGGACAAGTCGCCTCGGAAACCCCCATTTCGTCCAATACAGCTTCC
TTTGACCTATGATGGGCTGCTGTCCTTTATGGCGTCGGAGATGGTGGGCA
TCCTGCCGCTCCGTTTTAGTTTCCTGGGAGTTCAGCAATTGGAGGCTCCG
AATCAGAATTTTTATGTGTCAACCTTGGCAGCGGACACCACGCGTACGAT
GTTCGACAGTCTCGAGTTTGATGTCGATCCTTTGATGGCGCTGGGAAAGC
ACCTGATCATTCAGCTGGTTGATGATGATACAGTGGATAAGGCCCTTCTA
GCAGTCATATTGGCTGATGCATGTGATATACAGCCTATCGTGAGCAAGCT
GCATGAAGATATTCCAAATGATCCTCAGACACTCTACAACTTTGCTATCT
TGCAGCTGAAGCAGCGCACGGTGGTGCTTGGACACTCCTCGGTTCTTTCT
ACAGCTCAGGCACTGTTTCTGGTAGGATGGAGGGAGTTGTGCCTCGGCCA
TGCCCGACGCGCTACCTGCTTCACAGGCTATGCCTGCCGTACAATTGCCA
CTTTGTACACCTTTTGGCAGGCTGATAATTGCAGGAAGTGTGGCAGAAAG
CTTAATGGCGTGGATATAGGTATCGTCGAGCAAGAATTGGCACAGAACAT
TTACTGGCTCTGCTTGGCCACCACAACATGGGTGTTCATGCAAAGCAATC
AGCCATTCTCGTTGCTCACTCCGGAAACGACGCCCGACTTCCCGTGCCTG
GATGAGGCAGCTTCAGCCATTCTCCACTTAGACCGCGAATCGGGAAACAT
CTCCACGCTACAGGCCCAATTCCAGGCTACTCGGTGTCTGTGGCCACTCA
GTCACATCACCAGTACAGTGGCCCATATCTACACGCTGTATCTCAATGCG
CCTACAGAGAATAAAGAAGAGCAAGCTGTGCCATGGCAAAAACAGCATCT
TCACGAGTTACACCAACTTTTTCAGCCTTGCTATGATCGATCTGTTTTGG
CGTCGAGGATGCATAGGATCCTCCTCCATGCCATCGAACTCGTGGAGAGC
CAGGTCACCATAGTATCTTCACGGTCTTTGCTATTGAATGCGTACCATAG
TATTGCTATTCACATGCTTTTTTCTGGAGACAAAAGGGGTCAAGAGCGGC
CGATGATCTCGCAATCAGTCATGGACTCATTTTGTCTGTCGGCTTCTGCA
CTTCTTGCTATTACTCGACAAAGCCATTTCCAAGTGACTAGTCTGATGCC
TACGCAAGAGCTTCGAGGCGTCAATGGATCCAAAATAATGCTATATGCTC
TAGACACTTGCAGCAGGGGATTTTCGTACATATATGCGAAACACGAGCGT
GGATCGATTGAGGAGCGCAATATGATCAGCTTAAGACAAAGCCAGCTAGT
CCATATTGCCAACCAGCTGCATCAAGCCTGTAAAGGCGATGTAGTGTCTC
GGCTTGGAGCAGCGTTACTGCCGGTGAAGAAGAGATTGAAGCGTGCGAAA
CAAGCCTTTCAGCATCTTGAATCAACCTCCGTTCCCCAATCAGCACTGCT
TTCTGGTCAGAACGAGCAGAACCCATTGAGTAACTCGTCTCCTGCAAGTG
ATCTTCTAATGGACCTGGGCTTCAGCATGAACCAGATGGCAGACCCGTCT
CTTGCTCCTGATTACTCCGAGCCTTTGCCACTCATGGCAATCGATCAAAC
CTGGCCGCTGTCTGGGAACCCTTGTGAGATATACGATCCAGGCTTCTTCC
TAGACGGACCGATCACAGGGTCACTTCTGGGGTTTCCCGGCCTTGCCAAA
ATGAACATGCAACTTCAGGATTACGTATCTCTAGACGAAAGCGACCCGAA
CCAGGACGCGCTTGCTCTCTTAAGTCAAGGCACGAGTGGCATTTCGTTTG
ATGAACCGAACGTCCAAAGCACTCATGTCAACCCTCCGGACACTGAATAC
AGTGCTTTTCCATAAATGGGTCTGCGACGCAGCTGTGTCTTCTGTCGTAC
TCGTAAGATTCGATGTTCCGGTGAATCCATATGCAGTGCCTGTCGGAAGC
GCAACCTTAGCTGCGAATATAGCCTGGAAGCTCGAAAGGGACGGCCCGCG
CAGAGAGGAACAACAACATCACAGCCTCCATTGACGTCGGAACTACATAC
TAACAATGGAAGCGATAATTCGTCGCCATTGCAGTCGGGGGCATCTGCAG
AGAATTCCTTGGCACCCGACTCGGCAGCCCATGGCCACGAGGATTCTGCA
ACCAGCTCCGACCTGAATATTCATGTTGGCGATGAGCTGGACCGGAGATT
CGATGCCTACTTTATCACGAAAACTGACTCGGGCTCTAATCTCTTTCAAA
CTGCAATTGCCACCTATCAGCGGGAATTGGACAAGTCGCCTCGGAAACCC
CCATTTCGTCCAATACAGCTTCCTTTGACCTATGATGGGCTGCTGTCCTT
TATGGCGTCGGAGATGGTGGGCATCCTGCCGCTCCGTTTTAGTTTCCTGG
GAGTTCAGCAATTGGAGGCTCCGAATCAGAATTTTTATGTGTCAACCTTG
GCAGCGGACACCACGCGTACGATGTTCGACAGTCTCGAGTTTGATGTCGA
TCCTTTGATGGCGCTGGGAAAGCACCTGATCATTCAGCTGGTTGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005478KJC3_005478Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005478-T1KJC3_005478-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005478-T1.cdsKJC3_005478-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005478-T1.exon2KJC3_005478-T1.exon2Aspergillus niger KJC3exon
KJC3_005478-T1.exon1KJC3_005478-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005478-T1.utr5p1KJC3_005478-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2852881..2855330 -
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