|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2861041..2863481- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005480-T1 ID=KJC3_005480-T1|Name=KJC3_005480-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2441bp|location=Sequence derived from alignment at ch4:2861041..2863481- (Aspergillus niger KJC3)
GTCATCTAAATTCAACCGAGCCCGATTGGGTTTTGAGGGGTCAGCATTCA
GCTGAGAGACTACAGTGCAAGCATGCTCAGCTAGACCCCAGAAATGACCC
CAAATTGCACATAATGTACAGCCGAAACAATATTTCCCCGGAAACTCACT
CTTTGCATCGATTGCAGCCAGTTGCAAGCCGGATGATGGCTGGCCAAGCA
GTTAAGGGATTTAAACGGGGAAAAGAGCCAGACCACCGCAAGCGGGCACC
ACGTGATGTGGAGGCGGCGTTGCCCCTTTGCGGCCGGAAAAGAAACCTCC
CAGATTCCTGCTTCCTGCCACCCTCGACAACCGCTTATCGGCTTCGCTCC
TTTCCCTTCTTGCATGTATTCTACTTGTTTTGCTTCATATGACCAGTCCA
TCCCGTTGACTCCGCGCTTCGTGCCTTGTCTCGCCATTGCTCCCGATCGC
GTGTCTTGAGTCCGCTCGGATCGCTGTCGTGGCTTGATTTACACCGATCG
ACGTACCTGGAACCAAACTTTCACGTCAATCCTTCGTTTACGGTCTTTTC
TTATCGGTTCATGTGGACTACTGCTTGTATCACTTACACGACGTCTTCCT
CTTTTTGCAATTGATTCAACTGTGACGACCACAGATTTACAACATGAAGA
TTCATTCTTCGTCGCTTCTCCTCTTCCTCCTTCCTGCGCTTTCGGTCGCG
CTCACGGATCCAAGCTCGGCCGACAACGGTGCAAAGGACTCTCTTCTCGC
AGAGCGGGAAGCTTTGACTCCAAATGCCGTCGAAATAGATGCCGCTGCCG
CACCCAAGCCCGCGAAAGGGACGCTGGACGCCCCGATCGACGGCAAGGAT
GGCCGGCCACATGCTGGTCCCTGGGTGGAAACAAGTGCAGAGCGGGATCG
CAAGAAGACAGGCTCTACCACCTTGTCGGAGGAAAAGGCAAAAACCGACC
CTAAAGCGGAACAATTGGGCCCTGATGGCAACCCAATCCCTTACTCCAAC
GACGGCGTGATGGATGATCCTCATCGGACGGGTCCCAAGGAGGGCACTCG
GGGAACAGAGGGTGGAGTATCTGAGAAGTTGAGGGAGCCATACAACAATG
AGAAGACTCCGGGAAGTCCAAAGGAGGCACCTCCATTGCCGCACAGCGAG
CAGCAAAAGCTGCCAGTGGCGGGTCAGGATGCCGATGTCAAGGACACCAA
GGGATCGAACACCGACTCAACCTTGGGCAAATTGGAGGTAATTGAGACCT
ACTATCATGAGACTTGATGACGCTTGCTGATGGTTTTTAAGAAACCCGCA
GATTTGCCTGAAAAGCCACACGACATCCCACCTCCCAAGTCCCCGGCCAC
GGTCAAAGATAGCCCTCTCGGTCTCGACAAGCATGGCTCCTCGGCGGGCA
ACAAGCCTGGCGAACCGCTTGAGGAGGGAACTGCATTCCATTCGTTGTTG
TTCTCCTTCACTATGATTATCGTATCAGAAATTGGTGACAAGACTTTCCT
CGTTGCCGCGCTCATGGCCATGCGTCATCCGCGTCTGCTCGTCTTCTCCG
CGGCTTTCAGCGCCCTCATCTTCATGACAGTTCTCTCGGCTGTCCTAGGA
CACGCAGTACCTACTCTGATCCCCAAGTCCCTGACGAAATTGTTGGCTGC
CGTTCTGTTCTTCGTGTTCGGTCTGAAGATGCTCAAGGAAGGTCGCGAGA
TGTCGCCCGATGAGGGTGTTGGAGAGGAGATGAAGGAGGTCGAAATGGAA
CTGGAAGAAAAGGAGCAAGAGCAGCTGCGTCTGAACCGTCGCCGTTCTTC
TGTGACTCCCCACTCGTTGGAGGCTGGCCGCGTCGGTCGTCGCAAGTCTC
GCTCCTCTGGTAACCGTCTTCCCTCACCACCCGAAAGTGTCTCATCATCG
TCTTCTCGTGCTTCCTCTCCCTCTGGTAACCGCTGGAATGATGTTCTTGT
CGGAATGAACAATCTTTTCTCGCTTCTCCTCAGTCCCGCCTGGGTTCAAA
CTTTCGTTATGACCTTCCTGGGTGAATGGGGTGACCGCAGTCAGATCGCA
ACTATTGCTATGGCTGCCGGTCAAGATTACTGGTGGGTGACCATCGGTGC
TATCTCGGGACACGGACTTTGCACTGCGGCCGCCGTTATTGGCGGCAGTG
CTATTGCTGGCAAGGTCAGCATGCGCGTCGGTATGTATTCCTCCTTCCTA
AGTTCACGGCTGTTGCTAACGTGTCACAGTAACGCTGGGCGGTGCCACGG
CATTCTTGGTCTTTGGTGTCATCTATATGTTCGAAGCCATCTATTAGACC
TTAATTTGCTCCCGCTCATGTCTCCCATGTCGGGTGGTTCTCTTCAGTAT
AGATTATGCGATATGGTGCTTGTAATATTCGCGCCTTAGCGATGTTTTAA
TAAAATTCTTGATGCAGTATAATTATATTAAATTATTCACA back to topCoding sequence (CDS) from alignment at ch4:2861041..2863481- >KJC3_005480-T1 ID=KJC3_005480-T1|Name=KJC3_005480-T1|organism=Aspergillus niger KJC3|type=CDS|length=4653bp|location=Sequence derived from alignment at ch4:2861041..2863481- (Aspergillus niger KJC3)
TAACGCTGGGCGGTGCCACGGCATTCTTGGTCTTTGGTGTCATCTATATG
TTCGAAGCCATCTATTAGAAACCCGCAGATTTGCCTGAAAAGCCACACGA
CATCCCACCTCCCAAGTCCCCGGCCACGGTCAAAGATAGCCCTCTCGGTC
TCGACAAGCATGGCTCCTCGGCGGGCAACAAGCCTGGCGAACCGCTTGAG
GAGGGAACTGCATTCCATTCGTTGTTGTTCTCCTTCACTATGATTATCGT
ATCAGAAATTGGTGACAAGACTTTCCTCGTTGCCGCGCTCATGGCCATGC
GTCATCCGCGTCTGCTCGTCTTCTCCGCGGCTTTCAGCGCCCTCATCTTC
ATGACAGTTCTCTCGGCTGTCCTAGGACACGCAGTACCTACTCTGATCCC
CAAGTCCCTGACGAAATTGTTGGCTGCCGTTCTGTTCTTCGTGTTCGGTC
TGAAGATGCTCAAGGAAGGTCGCGAGATGTCGCCCGATGAGGGTGTTGGA
GAGGAGATGAAGGAGGTCGAAATGGAACTGGAAGAAAAGGAGCAAGAGCA
GCTGCGTCTGAACCGTCGCCGTTCTTCTGTGACTCCCCACTCGTTGGAGG
CTGGCCGCGTCGGTCGTCGCAAGTCTCGCTCCTCTGGTAACCGTCTTCCC
TCACCACCCGAAAGTGTCTCATCATCGTCTTCTCGTGCTTCCTCTCCCTC
TGGTAACCGCTGGAATGATGTTCTTGTCGGAATGAACAATCTTTTCTCGC
TTCTCCTCAGTCCCGCCTGGGTTCAAACTTTCGTTATGACCTTCCTGGGT
GAATGGGGTGACCGCAGTCAGATCGCAACTATTGCTATGGCTGCCGGTCA
AGATTACTGGTGGGTGACCATCGGTGCTATCTCGGGACACGGACTTTGCA
CTGCGGCCGCCGTTATTGGCGGCAGTGCTATTGCTGGCAAGGTCAGCATG
CGCGTCGATGAAGATTCATTCTTCGTCGCTTCTCCTCTTCCTCCTTCCTG
CGCTTTCGGTCGCGCTCACGGATCCAAGCTCGGCCGACAACGGTGCAAAG
GACTCTCTTCTCGCAGAGCGGGAAGCTTTGACTCCAAATGCCGTCGAAAT
AGATGCCGCTGCCGCACCCAAGCCCGCGAAAGGGACGCTGGACGCCCCGA
TCGACGGCAAGGATGGCCGGCCACATGCTGGTCCCTGGGTGGAAACAAGT
GCAGAGCGGGATCGCAAGAAGACAGGCTCTACCACCTTGTCGGAGGAAAA
GGCAAAAACCGACCCTAAAGCGGAACAATTGGGCCCTGATGGCAACCCAA
TCCCTTACTCCAACGACGGCGTGATGGATGATCCTCATCGGACGGGTCCC
AAGGAGGGCACTCGGGGAACAGAGGGTGGAGTATCTGAGAAGTTGAGGGA
GCCATACAACAATGAGAAGACTCCGGGAAGTCCAAAGGAGGCACCTCCAT
TGCCGCACAGCGAGCAGCAAAAGCTGCCAGTGGCGGGTCAGGATGCCGAT
GTCAAGGACACCAAGGGATCGAACACCGACTCAACCTTGGGCAAATTGGA
GTAACGCTGGGCGGTGCCACGGCATTCTTGGTCTTTGGTGTCATCTATAT
GTTCGAAGCCATCTATTAGAAACCCGCAGATTTGCCTGAAAAGCCACACG
ACATCCCACCTCCCAAGTCCCCGGCCACGGTCAAAGATAGCCCTCTCGGT
CTCGACAAGCATGGCTCCTCGGCGGGCAACAAGCCTGGCGAACCGCTTGA
GGAGGGAACTGCATTCCATTCGTTGTTGTTCTCCTTCACTATGATTATCG
TATCAGAAATTGGTGACAAGACTTTCCTCGTTGCCGCGCTCATGGCCATG
CGTCATCCGCGTCTGCTCGTCTTCTCCGCGGCTTTCAGCGCCCTCATCTT
CATGACAGTTCTCTCGGCTGTCCTAGGACACGCAGTACCTACTCTGATCC
CCAAGTCCCTGACGAAATTGTTGGCTGCCGTTCTGTTCTTCGTGTTCGGT
CTGAAGATGCTCAAGGAAGGTCGCGAGATGTCGCCCGATGAGGGTGTTGG
AGAGGAGATGAAGGAGGTCGAAATGGAACTGGAAGAAAAGGAGCAAGAGC
AGCTGCGTCTGAACCGTCGCCGTTCTTCTGTGACTCCCCACTCGTTGGAG
GCTGGCCGCGTCGGTCGTCGCAAGTCTCGCTCCTCTGGTAACCGTCTTCC
CTCACCACCCGAAAGTGTCTCATCATCGTCTTCTCGTGCTTCCTCTCCCT
CTGGTAACCGCTGGAATGATGTTCTTGTCGGAATGAACAATCTTTTCTCG
CTTCTCCTCAGTCCCGCCTGGGTTCAAACTTTCGTTATGACCTTCCTGGG
TGAATGGGGTGACCGCAGTCAGATCGCAACTATTGCTATGGCTGCCGGTC
AAGATTACTGGTGGGTGACCATCGGTGCTATCTCGGGACACGGACTTTGC
ACTGCGGCCGCCGTTATTGGCGGCAGTGCTATTGCTGGCAAGGTCAGCAT
GCGCGTCGATGAAGATTCATTCTTCGTCGCTTCTCCTCTTCCTCCTTCCT
GCGCTTTCGGTCGCGCTCACGGATCCAAGCTCGGCCGACAACGGTGCAAA
GGACTCTCTTCTCGCAGAGCGGGAAGCTTTGACTCCAAATGCCGTCGAAA
TAGATGCCGCTGCCGCACCCAAGCCCGCGAAAGGGACGCTGGACGCCCCG
ATCGACGGCAAGGATGGCCGGCCACATGCTGGTCCCTGGGTGGAAACAAG
TGCAGAGCGGGATCGCAAGAAGACAGGCTCTACCACCTTGTCGGAGGAAA
AGGCAAAAACCGACCCTAAAGCGGAACAATTGGGCCCTGATGGCAACCCA
ATCCCTTACTCCAACGACGGCGTGATGGATGATCCTCATCGGACGGGTCC
CAAGGAGGGCACTCGGGGAACAGAGGGTGGAGTATCTGAGAAGTTGAGGG
AGCCATACAACAATGAGAAGACTCCGGGAAGTCCAAAGGAGGCACCTCCA
TTGCCGCACAGCGAGCAGCAAAAGCTGCCAGTGGCGGGTCAGGATGCCGA
TGTCAAGGACACCAAGGGATCGAACACCGACTCAACCTTGGGCAAATTGG
AGTAACGCTGGGCGGTGCCACGGCATTCTTGGTCTTTGGTGTCATCTATA
TGTTCGAAGCCATCTATTAGAAACCCGCAGATTTGCCTGAAAAGCCACAC
GACATCCCACCTCCCAAGTCCCCGGCCACGGTCAAAGATAGCCCTCTCGG
TCTCGACAAGCATGGCTCCTCGGCGGGCAACAAGCCTGGCGAACCGCTTG
AGGAGGGAACTGCATTCCATTCGTTGTTGTTCTCCTTCACTATGATTATC
GTATCAGAAATTGGTGACAAGACTTTCCTCGTTGCCGCGCTCATGGCCAT
GCGTCATCCGCGTCTGCTCGTCTTCTCCGCGGCTTTCAGCGCCCTCATCT
TCATGACAGTTCTCTCGGCTGTCCTAGGACACGCAGTACCTACTCTGATC
CCCAAGTCCCTGACGAAATTGTTGGCTGCCGTTCTGTTCTTCGTGTTCGG
TCTGAAGATGCTCAAGGAAGGTCGCGAGATGTCGCCCGATGAGGGTGTTG
GAGAGGAGATGAAGGAGGTCGAAATGGAACTGGAAGAAAAGGAGCAAGAG
CAGCTGCGTCTGAACCGTCGCCGTTCTTCTGTGACTCCCCACTCGTTGGA
GGCTGGCCGCGTCGGTCGTCGCAAGTCTCGCTCCTCTGGTAACCGTCTTC
CCTCACCACCCGAAAGTGTCTCATCATCGTCTTCTCGTGCTTCCTCTCCC
TCTGGTAACCGCTGGAATGATGTTCTTGTCGGAATGAACAATCTTTTCTC
GCTTCTCCTCAGTCCCGCCTGGGTTCAAACTTTCGTTATGACCTTCCTGG
GTGAATGGGGTGACCGCAGTCAGATCGCAACTATTGCTATGGCTGCCGGT
CAAGATTACTGGTGGGTGACCATCGGTGCTATCTCGGGACACGGACTTTG
CACTGCGGCCGCCGTTATTGGCGGCAGTGCTATTGCTGGCAAGGTCAGCA
TGCGCGTCGATGAAGATTCATTCTTCGTCGCTTCTCCTCTTCCTCCTTCC
TGCGCTTTCGGTCGCGCTCACGGATCCAAGCTCGGCCGACAACGGTGCAA
AGGACTCTCTTCTCGCAGAGCGGGAAGCTTTGACTCCAAATGCCGTCGAA
ATAGATGCCGCTGCCGCACCCAAGCCCGCGAAAGGGACGCTGGACGCCCC
GATCGACGGCAAGGATGGCCGGCCACATGCTGGTCCCTGGGTGGAAACAA
GTGCAGAGCGGGATCGCAAGAAGACAGGCTCTACCACCTTGTCGGAGGAA
AAGGCAAAAACCGACCCTAAAGCGGAACAATTGGGCCCTGATGGCAACCC
AATCCCTTACTCCAACGACGGCGTGATGGATGATCCTCATCGGACGGGTC
CCAAGGAGGGCACTCGGGGAACAGAGGGTGGAGTATCTGAGAAGTTGAGG
GAGCCATACAACAATGAGAAGACTCCGGGAAGTCCAAAGGAGGCACCTCC
ATTGCCGCACAGCGAGCAGCAAAAGCTGCCAGTGGCGGGTCAGGATGCCG
ATGTCAAGGACACCAAGGGATCGAACACCGACTCAACCTTGGGCAAATTG
GAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005480-T1.utr3p1 | KJC3_005480-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005480-T1.utr5p1 | KJC3_005480-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | BUSCO:EOG092646CB |
| DBxref | InterPro:IPR001727 |
| DBxref | PFAM:PF01169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2861041..2863481 - |
|
