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KJC3_005489-T2, KJC3_005489-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005489-T2
Unique NameKJC3_005489-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2883114..2884938-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005489-T2 ID=KJC3_005489-T2|Name=KJC3_005489-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1825bp|location=Sequence derived from alignment at ch4:2883114..2884938- (Aspergillus niger KJC3)
CGAGCATCCACCCGGCATCTTCTCCAGAATGTTACGGCGATGACCCCAGA
CTGATCGGAATGGTAGGAGTTGCTATCTGTCCCTCATACCGGTAGGCCCC
GTTCGATAGGCAGCAAATGGTGCCACAAGAGTTACATATTTAGCACCACA
GCCTCGGAGTGACCCAGAAAGAAGCGCGCAACACTGCCATTTATACCTCT
GTTTTCTGTCCTCAGGTGGGACAACACAGATCCAAGGTCTTAATCAACAA
GTATTAGCAAAATGAAATTAATCGCTCTCAGCCTAATGAGCCTGCAGTGC
GTGGCGAGCATGCGGTTCGCCATGTACGTTGATGAGTGAGTACTAACAAC
ATCCTCATATTATCTCCAATCATACGCATCTAACAACAACGGGGAATCAG
GTACCACACAAGTGGCCTCCCCGGCGCCAACCAAACCCAAGGCATCACGC
ATGCTATCATGGCTTTCGCCCAGTCTACGCTCTTCAATTCTGACTCTCCC
CCACAATTTACTCCCTTCGAGTCTGTCTCCACCATGCGCAGTCGCTTCAG
CCCGGGGACTAAGCTCATGATCGCCATCGGCGGATGGGGTGATACCTCAG
GGTTCTCGACGGCCGCGAAAGATGAGACTTCTCGCAACCAGTATGCGAAG
AATGTAGCGGCTATGGTGAATCAGGTTGGTTTCGATGGTGTTGGTATGTC
TCTATACACGTCCTCACCATCCCTCCCGTAACTGGTATTGACCAAAAATG
TATAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGA
CAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTC
CTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGC
GGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCC
CGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTC
ATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTC
ATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGA
CAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGC
GATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAAT
GGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTG
AAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGAT
GGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTG
CAGTCAGTACGGAAACTGGTATGTCGACTACTCCTACTCTCCTTGCGAAC
GGTGTATGCTAATATGTGGCGATGTAGCGGTACAACCGACGACTTCTGCC
AAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGGCATCTCGATTACG
GATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGGATGATGTCATGGG
TGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTCTGGACGTGGGATA
CCGCAGACATGATTGCACGCAAGTTCACCGATATCGTCGATAAGCTGGGA
CTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATACGCTGGCATGGGA
GCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGGTAGAAGTCTTTCC
TTATTAAAGAGTTTGGACATGGAAGGAGAGTTCGGTAGCTTGGGGTTAAG
AGGGAGTGGTTCATTTGATAGTAGT
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Coding sequence (CDS) from alignment at ch4:2883114..2884938-

>KJC3_005489-T2 ID=KJC3_005489-T2|Name=KJC3_005489-T2|organism=Aspergillus niger KJC3|type=CDS|length=4980bp|location=Sequence derived from alignment at ch4:2883114..2884938- (Aspergillus niger KJC3)
CGGTACAACCGACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAA
CATGCAAAGGCATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAAC
GCTAAATTGGATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGT
CAATGTGTTCTGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCA
CCGATATCGTCGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTG
GGAGAGGATACGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGT
TGCTGCCAGGTAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGA
CTACAAGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACC
CTTTATTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTC
TCTATTGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACAC
CACAGGCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGT
ACGATCTCATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTC
GTGGATTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGG
TAATAAGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAG
ATCCCAGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTT
GTCGTAATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTT
GACTTTTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGA
GTACGGATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGA
AGTTGCTGCAGTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGG
CGCCAACCAAACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGT
CTACGCTCTTCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCT
GTCTCCACCATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGC
CATCGGCGGATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATG
AGACTTCTCGCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAG
GTTGGTTTCGATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTA
CAACCGACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGC
AAAGGCATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAA
ATTGGATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATG
TGTTCTGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGAT
ATCGTCGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGA
GGATACGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTG
CCAGGTAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACA
AGACAACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTA
TTCCTGCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTAT
TGCGGTCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAG
GCCCGCAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGAT
CTCATGAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGA
TTCATTTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATA
AGACAAACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCC
AGCGATGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGT
AATGGAGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTT
TTGAAAAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACG
GATGGCACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTG
CTGCAGTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCA
ACCAAACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACG
CTCTTCAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTC
CACCATGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCG
GCGGATGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACT
TCTCGCAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGG
TTTCGATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTACAACC
GACGACTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGG
CATCTCGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGG
ATGATGTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTC
TGGACGTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGATATCGT
CGATAAGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATA
CGCTGGCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGG
TAGACATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACA
ACACCGAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCT
GCAAGCGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGG
TCCCTGGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCG
CAGATCTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCAT
GAACCGCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCAT
TTAATACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACA
AACTTGGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGA
TGAGCAGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGG
AGAACGCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAA
AAGAGTGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGG
CACGTGTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCA
GTCAGTACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCAACCAA
ACCCAAGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTT
CAATTCTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCA
TGCGCAGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGA
TGGGGTGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCG
CAACCAGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCG
ATGGTGTTGATGCGGTTCGCCATGTACGTTGATGACGGTACAACCGACGA
CTTCTGCCAAGCAGGTTGTCTATCTGATTACGGAACATGCAAAGGCATCT
CGATTACGGATTCATGGCGGCGCGCGCAAGAAAACGCTAAATTGGATGAT
GTCATGGGTGGAGAGTACTACTTCGATGACCAGGTCAATGTGTTCTGGAC
GTGGGATACCGCAGACATGATTGCACGCAAGTTCACCGATATCGTCGATA
AGCTGGGACTAGGAGGTGTTATGGCGTGGAGTTTGGGAGAGGATACGCTG
GCATGGGAGCATTTGGGAGCCATGCAGGAGGGTGTTGCTGCCAGGTAGAC
ATAGATTGGGAATACCCCGGCGGTAATGGCCAAGACTACAAGACAACACC
GAACAGTGCCAAAGTGTCTGAAATAACCACCTACCCTTTATTCCTGCAAG
CGCTGCGGAGCGCCCTCGGCCCCAACAAACTCCTCTCTATTGCGGTCCCT
GGCAAGAAAGAAGACATGATCGCCTTCACCAACACCACAGGCCCGCAGAT
CTGGCCCTCAGTCGATATGGTGAACATCATGTCGTACGATCTCATGAACC
GCCGGAATAATGTCACTATGCACCATACATCTGTCGTGGATTCATTTAAT
ACAGTGCAGGCGTATCGGGATATTGGCCTCCCTGGTAATAAGACAAACTT
GGGAATGGCGTATTATGCCAAGTGGTTTGAGACAGATCCCAGCGATGAGC
AGGAGTGTGAGGACCAGCCGATTGGGTGCAAGGTTGTCGTAATGGAGAAC
GCGGATGGAAGCGATAACGGGAAAAGTGGGAGTTTGACTTTTGAAAAGAG
TGTTATGAGTGCGCCTCCAGCTAATCTGAAGACGAGTACGGATGGCACGT
GTGGATTTGACAAGGGGATGAAGTGTCCCGCTGGAAGTTGCTGCAGTCAG
TACGGAAACTGGTACCACACAAGTGGCCTCCCCGGCGCCAACCAAACCCA
AGGCATCACGCATGCTATCATGGCTTTCGCCCAGTCTACGCTCTTCAATT
CTGACTCTCCCCCACAATTTACTCCCTTCGAGTCTGTCTCCACCATGCGC
AGTCGCTTCAGCCCGGGGACTAAGCTCATGATCGCCATCGGCGGATGGGG
TGATACCTCAGGGTTCTCGACGGCCGCGAAAGATGAGACTTCTCGCAACC
AGTATGCGAAGAATGTAGCGGCTATGGTGAATCAGGTTGGTTTCGATGGT
GTTGATGCGGTTCGCCATGTACGTTGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005489KJC3_005489Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005489-T2KJC3_005489-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005489-T2.cdsKJC3_005489-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005489-T2.utr3p1KJC3_005489-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005489-T2.exon5KJC3_005489-T2.exon5Aspergillus niger KJC3exon
KJC3_005489-T2.exon4KJC3_005489-T2.exon4Aspergillus niger KJC3exon
KJC3_005489-T2.exon3KJC3_005489-T2.exon3Aspergillus niger KJC3exon
KJC3_005489-T2.exon2KJC3_005489-T2.exon2Aspergillus niger KJC3exon
KJC3_005489-T2.exon1KJC3_005489-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005489-T2.utr5p2KJC3_005489-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005489-T2.utr5p1KJC3_005489-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR018371
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR036861
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefInterPro:IPR001002
DBxrefPFAM:PF00704
DBxrefPFAM:PF00187
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2883114..2884938 -
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