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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2906793..2908918- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005498-T1 ID=KJC3_005498-T1|Name=KJC3_005498-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2126bp|location=Sequence derived from alignment at ch4:2906793..2908918- (Aspergillus niger KJC3)
CCCAACTTTCCCATTGAGGCAGGAATATATAGACAGGATAGGATGTAGTT
ATCCATTACGCGTTGATCGTGCAGTTCGACTTATAGAGCATGCGTGAGCT
ATATGCATGCGCTATTGTGACATATAAGGAGCATATTGTACGAGCAAGTT
ATACCCAGAACTTCAGTAAAAGCCTTTTACCGCCCCATCAGACAGGGTCC
AAACTCTTGGCGCAATTTAGGCCGGGTTAACGTCAGCCAACGAATGTCCA
ACAGACCTCCAACAGTCTAATAACCCTAGTACGTCAGTGCTTCAGCCTAC
AGCACACTCCGCAACAGGTAGCATATGCGTCGTCACTAGCACTGCTGAAG
CGCTTTTTTGGATAATGCAGTCTGACAATGCGAACAATGACGCGGTCAGG
TTTGCAGCCTAGACTACCTGCGAGTCGGAGTTTGATGGATATATCTGCCT
CGAAGACCGACCCAATGAGACGCATATAAGTAGGAGTTCTACTCGCAGTT
GCGATTCCATCTTCATCAACAATCTCATTCTCATCTTGACGTTCTACTGC
ATCAATATAGCAACAATGGCTGGTCCAGTCCCTAAACCAGAGTTTCTTCT
GGGCTTCCATCAGGTTTTGTCACCCACTGGTGGCATCAAAGTGTCTCCGC
TATGCCTGGGAACTATGAATTTTGGAACAACCTGGTCAGCCAATCCTCTT
GCTTACAATAAAATAACGATTTACTGACACCCAGTAGGGAACCATACATG
GGCGAATGCAGCAAGGAAGAATCCTTCGCAATCATGGACACCTTTTTCGA
TCACGGTGGAAACTTCATCGACACGTATGTTGAATTAGCATACACCAGCT
CTTTCGACGAGCGACAGGCTTATAATCTCTAGTGCCAACGTTTACCAGGA
CGGACAATCCGAACAATGGATTGGAGAATGGATGAAGAAACGTGGGAACC
GAGACCAGATGGTGTAAGTACACACCCTTTATTATCAGGTTGCTACATCT
TAGTATGCTCTATATTGACAATGACAGCATCGCAACTAAATACACGACCG
GATTCCGCCGCACACACGTATCCACTGAGCCCATCCAATCGAACTTCGTC
GGAAATTCCGTGAAGTCTATGAATCTGTCCGTCAAGAACAGTCTCGAAAA
GCTTCAAACTGACTACATTGACATTCTCTATGTGCACTGGTGGGACTTTA
CCACCAGCGTGGAGGAAGTCATGCATGGCCTGAACGCACTCGTCTTGGCC
GGGAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCTGCTTGGCTGGTAGT
TAAGGCAAATGCCTACGCGCGCGCGAACGGACTCAGGCCATTCTCTGTCT
ATCAGGGCAAGTGGAATGCTGGATTCAGAGATATAGAAACGGAGATTGTG
CCCATGTGTCGGGACCAGGGGATGGCAATCGCGCCTTTTGCAGTGCTAGG
CCAGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGCGGAGTACAAGGGCT
CTGGACGAGCGGCACTACGGGCCGAGGAAGATGACAAGGTTTCTGACTTG
TTGGAGGCTGTTGCCAAGCGGAATGGGACAACCCTTTATGCTATTGTGAG
TTTCACCCTTACCTATACCCATATTCAGCACCACGTATAGAGACAATTCA
ACTGACATATCTCTTTTAGGCACTCGCATGGGTTCGCTTCAAGGCACCTT
ACGTCTTCCCCATTATTGGCCAACGGAGCGCAGCGCATATGAAAGCCAAC
ATTGAAGCTCTGAGCCTGGATTTGTCGAAGGAGGATATGGATGAGATTGA
TAAGGCCACTAAGTTCAATCCTGCCTTCCCACTGGACTACCTCCTCGCCG
AAAATTTCAGTACCGCGTTTACTGCAGCAGATGTGCAATTGACGAAGTGG
ACCGCGCATATAGATGCTCCTACTCCTGTGATGCCGGTCAGACCGCGTAA
GGATTTGTGAATTAACTGTGGGGTTGTTGTGGGTGCTTCATCTGCTATTG
ATGCTATGAGAGGATAATAAAACCAGTGTCATTATAGAGGTTACTGGACA
GTCCATGAGCTTGATCTCAGGTGTGGATAGGCCAATAAAGTCAGATATTA
AGTTGTCTAGACAAATATCGAGTGCG back to topCoding sequence (CDS) from alignment at ch4:2906793..2908918- >KJC3_005498-T1 ID=KJC3_005498-T1|Name=KJC3_005498-T1|organism=Aspergillus niger KJC3|type=CDS|length=5730bp|location=Sequence derived from alignment at ch4:2906793..2908918- (Aspergillus niger KJC3)
GCACTCGCATGGGTTCGCTTCAAGGCACCTTACGTCTTCCCCATTATTGG
CCAACGGAGCGCAGCGCATATGAAAGCCAACATTGAAGCTCTGAGCCTGG
ATTTGTCGAAGGAGGATATGGATGAGATTGATAAGGCCACTAAGTTCAAT
CCTGCCTTCCCACTGGACTACCTCCTCGCCGAAAATTTCAGTACCGCGTT
TACTGCAGCAGATGTGCAATTGACGAAGTGGACCGCGCATATAGATGCTC
CTACTCCTGTGATGCCGGTCAGACCGCGTAAGGATTTGTGACATCGCAAC
TAAATACACGACCGGATTCCGCCGCACACACGTATCCACTGAGCCCATCC
AATCGAACTTCGTCGGAAATTCCGTGAAGTCTATGAATCTGTCCGTCAAG
AACAGTCTCGAAAAGCTTCAAACTGACTACATTGACATTCTCTATGTGCA
CTGGTGGGACTTTACCACCAGCGTGGAGGAAGTCATGCATGGCCTGAACG
CACTCGTCTTGGCCGGGAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCT
GCTTGGCTGGTAGTTAAGGCAAATGCCTACGCGCGCGCGAACGGACTCAG
GCCATTCTCTGTCTATCAGGGCAAGTGGAATGCTGGATTCAGAGATATAG
AAACGGAGATTGTGCCCATGTGTCGGGACCAGGGGATGGCAATCGCGCCT
TTTGCAGTGCTAGGCCAGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGC
GGAGTACAAGGGCTCTGGACGAGCGGCACTACGGGCCGAGGAAGATGACA
AGGTTTCTGACTTGTTGGAGGCTGTTGCCAAGCGGAATGGGACAACCCTT
TATGCTATTTGCCAACGTTTACCAGGACGGACAATCCGAACAATGGATTG
GAGAATGGATGAAGAAACGTGGGAACCGAGACCAGATGGTGGAACCATAC
ATGGGCGAATGCAGCAAGGAAGAATCCTTCGCAATCATGGACACCTTTTT
CGATCACGGTGGAAACTTCATCGACACATGGCTGGTCCAGTCCCTAAACC
AGAGTTTCTTCTGGGCTTCCATCAGGTTTTGTCACCCACTGGTGGCATCA
AAGTGTCTCCGCTATGCCTGGGAACTATGAATTTTGGAACAACCTGGCAC
TCGCATGGGTTCGCTTCAAGGCACCTTACGTCTTCCCCATTATTGGCCAA
CGGAGCGCAGCGCATATGAAAGCCAACATTGAAGCTCTGAGCCTGGATTT
GTCGAAGGAGGATATGGATGAGATTGATAAGGCCACTAAGTTCAATCCTG
CCTTCCCACTGGACTACCTCCTCGCCGAAAATTTCAGTACCGCGTTTACT
GCAGCAGATGTGCAATTGACGAAGTGGACCGCGCATATAGATGCTCCTAC
TCCTGTGATGCCGGTCAGACCGCGTAAGGATTTGTGACATCGCAACTAAA
TACACGACCGGATTCCGCCGCACACACGTATCCACTGAGCCCATCCAATC
GAACTTCGTCGGAAATTCCGTGAAGTCTATGAATCTGTCCGTCAAGAACA
GTCTCGAAAAGCTTCAAACTGACTACATTGACATTCTCTATGTGCACTGG
TGGGACTTTACCACCAGCGTGGAGGAAGTCATGCATGGCCTGAACGCACT
CGTCTTGGCCGGGAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCTGCTT
GGCTGGTAGTTAAGGCAAATGCCTACGCGCGCGCGAACGGACTCAGGCCA
TTCTCTGTCTATCAGGGCAAGTGGAATGCTGGATTCAGAGATATAGAAAC
GGAGATTGTGCCCATGTGTCGGGACCAGGGGATGGCAATCGCGCCTTTTG
CAGTGCTAGGCCAGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGCGGAG
TACAAGGGCTCTGGACGAGCGGCACTACGGGCCGAGGAAGATGACAAGGT
TTCTGACTTGTTGGAGGCTGTTGCCAAGCGGAATGGGACAACCCTTTATG
CTATTTGCCAACGTTTACCAGGACGGACAATCCGAACAATGGATTGGAGA
ATGGATGAAGAAACGTGGGAACCGAGACCAGATGGTGGAACCATACATGG
GCGAATGCAGCAAGGAAGAATCCTTCGCAATCATGGACACCTTTTTCGAT
CACGGTGGAAACTTCATCGACACATGGCTGGTCCAGTCCCTAAACCAGAG
TTTCTTCTGGGCTTCCATCAGGTTTTGTCACCCACTGGTGGCATCAAAGT
GTCTCCGCTATGCCTGGGAACTATGAATTTTGGAACAACCTGGCACTCGC
ATGGGTTCGCTTCAAGGCACCTTACGTCTTCCCCATTATTGGCCAACGGA
GCGCAGCGCATATGAAAGCCAACATTGAAGCTCTGAGCCTGGATTTGTCG
AAGGAGGATATGGATGAGATTGATAAGGCCACTAAGTTCAATCCTGCCTT
CCCACTGGACTACCTCCTCGCCGAAAATTTCAGTACCGCGTTTACTGCAG
CAGATGTGCAATTGACGAAGTGGACCGCGCATATAGATGCTCCTACTCCT
GTGATGCCGGTCAGACCGCGTAAGGATTTGTGACATCGCAACTAAATACA
CGACCGGATTCCGCCGCACACACGTATCCACTGAGCCCATCCAATCGAAC
TTCGTCGGAAATTCCGTGAAGTCTATGAATCTGTCCGTCAAGAACAGTCT
CGAAAAGCTTCAAACTGACTACATTGACATTCTCTATGTGCACTGGTGGG
ACTTTACCACCAGCGTGGAGGAAGTCATGCATGGCCTGAACGCACTCGTC
TTGGCCGGGAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCTGCTTGGCT
GGTAGTTAAGGCAAATGCCTACGCGCGCGCGAACGGACTCAGGCCATTCT
CTGTCTATCAGGGCAAGTGGAATGCTGGATTCAGAGATATAGAAACGGAG
ATTGTGCCCATGTGTCGGGACCAGGGGATGGCAATCGCGCCTTTTGCAGT
GCTAGGCCAGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGCGGAGTACA
AGGGCTCTGGACGAGCGGCACTACGGGCCGAGGAAGATGACAAGGTTTCT
GACTTGTTGGAGGCTGTTGCCAAGCGGAATGGGACAACCCTTTATGCTAT
TTGCCAACGTTTACCAGGACGGACAATCCGAACAATGGATTGGAGAATGG
ATGAAGAAACGTGGGAACCGAGACCAGATGGTGGAACCATACATGGGCGA
ATGCAGCAAGGAAGAATCCTTCGCAATCATGGACACCTTTTTCGATCACG
GTGGAAACTTCATCGACACATGGCTGGTCCAGTCCCTAAACCAGAGTTTC
TTCTGGGCTTCCATCAGGTTTTGTCACCCACTGGTGGCATCAAAGTGTCT
CCGCTATGCCTGGGAACTATGAATTTTGGAACAACCTGGCACTCGCATGG
GTTCGCTTCAAGGCACCTTACGTCTTCCCCATTATTGGCCAACGGAGCGC
AGCGCATATGAAAGCCAACATTGAAGCTCTGAGCCTGGATTTGTCGAAGG
AGGATATGGATGAGATTGATAAGGCCACTAAGTTCAATCCTGCCTTCCCA
CTGGACTACCTCCTCGCCGAAAATTTCAGTACCGCGTTTACTGCAGCAGA
TGTGCAATTGACGAAGTGGACCGCGCATATAGATGCTCCTACTCCTGTGA
TGCCGGTCAGACCGCGTAAGGATTTGTGACATCGCAACTAAATACACGAC
CGGATTCCGCCGCACACACGTATCCACTGAGCCCATCCAATCGAACTTCG
TCGGAAATTCCGTGAAGTCTATGAATCTGTCCGTCAAGAACAGTCTCGAA
AAGCTTCAAACTGACTACATTGACATTCTCTATGTGCACTGGTGGGACTT
TACCACCAGCGTGGAGGAAGTCATGCATGGCCTGAACGCACTCGTCTTGG
CCGGGAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCTGCTTGGCTGGTA
GTTAAGGCAAATGCCTACGCGCGCGCGAACGGACTCAGGCCATTCTCTGT
CTATCAGGGCAAGTGGAATGCTGGATTCAGAGATATAGAAACGGAGATTG
TGCCCATGTGTCGGGACCAGGGGATGGCAATCGCGCCTTTTGCAGTGCTA
GGCCAGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGCGGAGTACAAGGG
CTCTGGACGAGCGGCACTACGGGCCGAGGAAGATGACAAGGTTTCTGACT
TGTTGGAGGCTGTTGCCAAGCGGAATGGGACAACCCTTTATGCTATTTGC
CAACGTTTACCAGGACGGACAATCCGAACAATGGATTGGAGAATGGATGA
AGAAACGTGGGAACCGAGACCAGATGGTGGAACCATACATGGGCGAATGC
AGCAAGGAAGAATCCTTCGCAATCATGGACACCTTTTTCGATCACGGTGG
AAACTTCATCGACACATGGCTGGTCCAGTCCCTAAACCAGAGTTTCTTCT
GGGCTTCCATCAGGTTTTGTCACCCACTGGTGGCATCAAAGTGTCTCCGC
TATGCCTGGGAACTATGAATTTTGGAACAACCTGGCACTCGCATGGGTTC
GCTTCAAGGCACCTTACGTCTTCCCCATTATTGGCCAACGGAGCGCAGCG
CATATGAAAGCCAACATTGAAGCTCTGAGCCTGGATTTGTCGAAGGAGGA
TATGGATGAGATTGATAAGGCCACTAAGTTCAATCCTGCCTTCCCACTGG
ACTACCTCCTCGCCGAAAATTTCAGTACCGCGTTTACTGCAGCAGATGTG
CAATTGACGAAGTGGACCGCGCATATAGATGCTCCTACTCCTGTGATGCC
GGTCAGACCGCGTAAGGATTTGTGACATCGCAACTAAATACACGACCGGA
TTCCGCCGCACACACGTATCCACTGAGCCCATCCAATCGAACTTCGTCGG
AAATTCCGTGAAGTCTATGAATCTGTCCGTCAAGAACAGTCTCGAAAAGC
TTCAAACTGACTACATTGACATTCTCTATGTGCACTGGTGGGACTTTACC
ACCAGCGTGGAGGAAGTCATGCATGGCCTGAACGCACTCGTCTTGGCCGG
GAAGGTCCTCTATTTGGGTGTCTCTGGTACTCCTGCTTGGCTGGTAGTTA
AGGCAAATGCCTACGCGCGCGCGAACGGACTCAGGCCATTCTCTGTCTAT
CAGGGCAAGTGGAATGCTGGATTCAGAGATATAGAAACGGAGATTGTGCC
CATGTGTCGGGACCAGGGGATGGCAATCGCGCCTTTTGCAGTGCTAGGCC
AGGCGAAGTTCAGACCTGCAGAGCAGCGCAACGCGGAGTACAAGGGCTCT
GGACGAGCGGCACTACGGGCCGAGGAAGATGACAAGGTTTCTGACTTGTT
GGAGGCTGTTGCCAAGCGGAATGGGACAACCCTTTATGCTATTTGCCAAC
GTTTACCAGGACGGACAATCCGAACAATGGATTGGAGAATGGATGAAGAA
ACGTGGGAACCGAGACCAGATGGTGGAACCATACATGGGCGAATGCAGCA
AGGAAGAATCCTTCGCAATCATGGACACCTTTTTCGATCACGGTGGAAAC
TTCATCGACACATGGCTGGTCCAGTCCCTAAACCAGAGTTTCTTCTGGGC
TTCCATCAGGTTTTGTCACCCACTGGTGGCATCAAAGTGTCTCCGCTATG
CCTGGGAACTATGAATTTTGGAACAACCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005498-T1.utr3p1 | KJC3_005498-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023210 |
| DBxref | InterPro:IPR036812 |
| DBxref | PFAM:PF00248 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2906793..2908918 - |
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