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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2912818..2915489- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005500-T1 ID=KJC3_005500-T1|Name=KJC3_005500-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2672bp|location=Sequence derived from alignment at ch4:2912818..2915489- (Aspergillus niger KJC3)
CTCAGCCGTCCCAATTTACCCCTCGTGCCGCCACCCAAGGGTGGGAGGCC
ACACGAACCATAGGAAGGAGAAAGCTAATAGTACTAACTCCTCAATCCAT
AGCCCTAATTAGCTGGAGGCTAAGTTTGGCAAGCCCCGGATTAAACAGCA
TGCCAGGTTCTAGAAGTTCATAAACAGCCATCCCGTACTTTAGGTTCAGA
ATAGTCCTTGCGACCATGACCCTGTTGCTTCTCGTTGCGCTCCCATAGAA
CTCATCATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCA
GACCTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTGT
ATGTACAACCCTTTGACGTTCATAGATAACCTATCCTTCGTGGGCATTAT
CAGTAACAACAGTACAGGTTTGCGCGCTACAAGCGACTGGGATTTCGATT
CCAGGTCGAAGATTATCTCATGGTGGTTGCTGTGGTAGGTTGAGCGCATT
GCACTGTCATACATTGGGTTCTGTGTTAACATGCTCTTTTTGTGGTCACA
GGGATTCTACACGGCATTCGCAGTCACAAACATTTTTATCATCGAGGGAG
GAGGTAGCAATTTGTATGAACCTGCCAGTTTGTACAACACTTTCTCAGCC
TCCGAGATTGCTGCAAGGGTCAAAGGTTCCAAGATCGAGTTTGCTTCGGA
GAATGTATGGTTGCTTCCCAATTCTAGGCAAAATATGGTCTAACATGAAT
TTCAATACAGTGCCAGCTCTGCACCATCTATTCCCTCAAGGCTTGCATGC
TGTTGGTGCACTCCCGACTCACGTAAGTGCACTCTCTGAGTCAACGCCGA
GCTTCTGCTGACGGAAACTTCCAAGGTCGAACTTATGGCAGCACCGCCTG
GTAAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGCT
GGTGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCGC
CACCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATGT
GTCTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCAT
GTTCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTGG
TTTTCTCCATGGGTATTGTTGTGGTGCGTCCCTGCCCCGTTCGGCTTTGG
CCCCCAGACTAGTTGCTAACCTGCATCCTCTGCCCCTCAGATCGCCTGTG
CCATCATTTCCAAATACTTTACATTCCACAATATCTACGACGATAGCTAC
CAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGTGACGAACTT
GCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCCTGCGAACGA
GTCAATACACCAACAAAGGACGATACAATGAAGCCCAATACGGAACCGAC
CACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCGGTCGACTCG
CAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGGACGGAATCA
CGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGGGTGGGACAT
GTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACACAGAGTGGGC
TCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGACCGAGATTG
TCATCCAGAAAGACTGATCAGGCCATGATTGTTCTATGGATCGTCTCAAC
CGAGCCGACGAGCAGTCGCTATGACCTTGAGTTCCTCCCAGGAGTCAGTC
ACTTTTGCTCTCCTGGTCGCGGAGGCAAGACCCTTTAATCGCAAACGACA
GCCTTACGAAATCAAACCCCCCCCCCCCCGCCCCCCCCCTTCCTCGATTC
CAGGATTTGAACCCCTCCAGGCTCCAGCGATCGCGAAGAGTTCGTGCAGC
GCAATTGCCAACAACCCCGCTGTATCTGAACCACAGTGACGTCTCTCGGC
ACCACTGGGGCCCCGATCATCCAAACCACGCGGGGGCCGCATCCACGTTC
CATTGAATGTCTCCGATCACTTTGAGCAAGTGAAAGGTAGATCAGTTCCA
CCGTCACCGCTACCCGTCCAGCCACGGCCGTCGGATTTAGGTAATCAACT
ACACTACTGTGTCTACGGTCCCACCAGGGACGAGAGTACACGTAATGTAT
GGACTACCGAGCTGCCTACTCAGTCTTCACGATTCTTCCGTTGGAAAGGA
CCTTCAGGCACGGAGCTGAAGCAGGCTCACGCCCCCGTTCTCGGCCGGGG
AGGATTTTAGCGATCGGCCGGCCACGAGGTTTTCACCTGGTTGTGGTGGT
GGTCGGTGCTGCGGCTCCCCCTCATTCCATTCTCCCTCACTCCCTTTCCG
ATCAAACATCTCAAAACCGATTCGGACGAGAAGACGATCCTCATCATGTA
TAGATTTCCCTATGTTTCTTGTATATAGCTTTGATGACCCTACTTTAATC
ATACCTAATGATGTATCAACGACACAATATTCCTTATTTATTTGAGGCTG
TGCAATCAGCAATCACTTACAAGTCCCCCTGAAGGGAAATTGAAATTCAC
CATGGCTATAGCTGAAAGTCCGAAACTCTGCCAAGCCGGAGCGGGTCGTA
GTCGGGTCGGCTACAAACCCAC back to topCoding sequence (CDS) from alignment at ch4:2912818..2915489- >KJC3_005500-T1 ID=KJC3_005500-T1|Name=KJC3_005500-T1|organism=Aspergillus niger KJC3|type=CDS|length=6894bp|location=Sequence derived from alignment at ch4:2912818..2915489- (Aspergillus niger KJC3)
ATCGCCTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGA
CGATAGCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACG
TGACGAACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTC
CTGCGAACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATA
CGGAACCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGC
GGTCGACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCG
GACGGAATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGG
GGTGGGACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACA
CAGAGTGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACG
ACCGAGATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCC
TGGTAAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAG
CTGGTGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCC
GCCACCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAAT
GTGTCTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCC
ATGTTCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGT
GGTTTTCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCC
TCAAGGCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGG
CATTCGCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTG
TATGAACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGC
AAGGGTCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGC
TACAAGCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGT
TGCTGTGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGC
AGACCTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTA
TCGCCTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGAC
GATAGCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGT
GACGAACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCC
TGCGAACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATAC
GGAACCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCG
GTCGACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGG
ACGGAATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGG
GTGGGACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACAC
AGAGTGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGA
CCGAGATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCCT
GGTAAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGC
TGGTGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCG
CCACCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATG
TGTCTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCA
TGTTCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTG
GTTTTCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCCT
CAAGGCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGGC
ATTCGCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTGT
ATGAACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGCA
AGGGTCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGCT
ACAAGCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGTT
GCTGTGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCA
GACCTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTAT
CGCCTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGACG
ATAGCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGTG
ACGAACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCCT
GCGAACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATACG
GAACCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCGG
TCGACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGGA
CGGAATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGGG
TGGGACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACACA
GAGTGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGAC
CGAGATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCCTG
GTAAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGCT
GGTGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCGC
CACCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATGT
GTCTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCAT
GTTCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTGG
TTTTCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCCTC
AAGGCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGGCA
TTCGCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTGTA
TGAACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGCAA
GGGTCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGCTA
CAAGCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGTTG
CTGTGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCAG
ACCTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTATC
GCCTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGACGA
TAGCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGTGA
CGAACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCCTG
CGAACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATACGG
AACCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCGGT
CGACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGGAC
GGAATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGGGT
GGGACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACACAG
AGTGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGACC
GAGATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCCTGG
TAAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGCTG
GTGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCGCC
ACCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATGTG
TCTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCATG
TTCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTGGT
TTTCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCCTCA
AGGCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGGCAT
TCGCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTGTAT
GAACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGCAAG
GGTCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGCTAC
AAGCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGTTGC
TGTGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCAGA
CCTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTATCG
CCTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGACGAT
AGCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGTGAC
GAACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCCTGC
GAACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATACGGA
ACCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCGGTC
GACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGGACG
GAATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGGGTG
GGACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACACAGA
GTGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGACCG
AGATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCCTGGT
AAAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGCTGG
TGCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCGCCA
CCCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATGTGT
CTTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCATGT
TCATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTGGTT
TTCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCCTCAA
GGCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGGCATT
CGCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTGTATG
AACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGCAAGG
GTCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGCTACA
AGCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGTTGCT
GTGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCAGAC
CTGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACTATCGC
CTGTGCCATCATTTCCAAATACTTTACATTCCACAATATCTACGACGATA
GCTACCAATTCTGGTACCTTAGGGAGGCATCGATCGGCATGTACGTGACG
AACTTGCCATTCGTCTGGAGTCTCGCGAGATCGACACTTTCCTTCCTGCG
AACGAGTCAATACACCAACAAAGGACGATACAATGAAGCCCAATACGGAA
CCGACCACGCCTCGAATGCACGATGGAAATCGGGGGTGAATTCGCGGTCG
ACTCGCAACATGCCTACCATTTACGATACTCGAACTGGACGCGCGGACGG
AATCACGCGCACCGAAAGCGAAGAGAACATTATTGAAATGGGTGGGGTGG
GACATGTCACCAACAAATCGACCGCATCGACTGGTAGCGACAACACAGAG
TGGGCTCATGGAAATGGACAGGATGACTTCATTATCAGAAAGACGACCGA
GATTGTCATCCAGAAAGACTGAGTCGAACTTATGGCAGCACCGCCTGGTA
AAAATTATCGCTGGATACACCCTAATCGGCTGGATCACCACAGAGCTGGT
GCTGTTCCTGAATTGTCGCCCCCTGTCCGGATATTGGACGCTCCCGCCAC
CCCATAAGGAGTGCAGCACCTATTTTCGCTACGAAGTGGTGCAATGTGTC
TTCAACATCAGTTCCGATATTTTCATTCTCTGCGTCATACTTCCCATGTT
CATCCGCGCAAAAATGCCGTGGAAGACTAAGTTGCCCGTGATCGTGGTTT
TCTCCATGGGTATTGTTGTGTGCCAGCTCTGCACCATCTATTCCCTCAAG
GCTTGCATGCTGTTGGTGCACTCCCGACTCACGGATTCTACACGGCATTC
GCAGTCACAAACATTTTTATCATCGAGGGAGGAGGTAGCAATTTGTATGA
ACCTGCCAGTTTGTACAACACTTTCTCAGCCTCCGAGATTGCTGCAAGGG
TCAAAGGTTCCAAGATCGAGTTTGCTTCGGAGAATGTTTGCGCGCTACAA
GCGACTGGGATTTCGATTCCAGGTCGAAGATTATCTCATGGTGGTTGCTG
TGATGGCCAATGATGGTGGCGGCAGTCCGCATGATTTGGTCGTGCAGACC
TGGATCATGTACAGCATTGCTATTCTGCTGTTCCTGGTGAGACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005500-T1.utr3p1 | KJC3_005500-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005500-T1.utr5p1 | KJC3_005500-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2912818..2915489 - |
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