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KJC3_005521-T1, KJC3_005521-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005521-T1
Unique NameKJC3_005521-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2966581..2968560-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005521-T1 ID=KJC3_005521-T1|Name=KJC3_005521-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1980bp|location=Sequence derived from alignment at ch4:2966581..2968560- (Aspergillus niger KJC3)
TGGACAATGACCAACGGAAGAAACTAAATGATGAACGGGCTAGCGCATTA
TTAAGCCAAGCTGTCCAGGATCGGGGCCAAGCGCGACAACATTGCAATTG
CTGGATGTGATAGGACATGGTCGAGCGCGATAATGTAACTGCGAAGGCTA
AGAGAGGGGCTCACTGATCGACCTTCCGCGAAAATTCTGTGCTTTGGTGC
ATGCCACAATCGTGATCATACAGGCTTCCCTGATAAATCGATGCCCCCAA
ATGCGTTGCCGGCGTCTAGCGCAAATCACTAGCGCCTTCTGTCCCCGTAC
TTTAAACATCTGTTGCACCCACAAACTATAACACCCATCCCACAGCCTAA
CGAAAATACCGATTAGCCATGGAGAAGAACTGTCGAAGGAGGAGATCCAG
CAAAAAGAGCACGACGGGTTGTCGAACCTGTCGGTAAGTGGACCCTCAAC
GTTCCAGATCAGTCATCATCTGATTTACTTCAGATTGCGCCATGTAAAAT
GTGATGAAACTCCAGGCATGTGCCAGCGCTGCACATCCACGGGCAGAAAG
TGTGATGGATATGACGCAGAGCGACTACCCAACCGACGAACTACTGCCAC
ATTGACCGAATTAGCACCTGATATTGCTCGTCGCTTTAGGTGGAAGTTGA
CTTCCGATGAGCAACGTTGTATCTCATTCTTTCAGAACCGAATTGGACCA
TCCATAGTCGCCTATTTTGACTGCGTTCTGTGGCAACGGCTTGTCCTCCA
ACTTAGCCAGGTTGAGCCGGCTGCCTTTCATGCGCTTGTCGCGTTTAGTG
CTGTCTATGCGGATTATGAAGCCAGAGGTATACCTGTTGATAAGGATGAT
ATGGATAATACGTTGCAACGATTTGCACTCGACCAGTGTGCGAGAGCGTA
CAGGTGGTTGAACTCACGCTCTGCTTCTCAGGATCCCGGATTCCGCGATA
TCATGCTAGTATGTTGTGTGCTATTCATCATGGTAGAATGGATGCGCGGA
GAGTATGACACTGCCACGATACACCTGAAGAATGGGCTCCGAATACTAGA
GGATGACCAGACCTTGACGGCAGCAACTGCTGCATTCAGCTCCGTCTTCG
GACAATGTCTAGGCGAATCACTTGCCTCCCTGAAAGTCCAATCAACTTAT
TTTGGCATCGAAGAGCCAACACAACCACAGTCTCCGAAGAGCTCCGACCC
TGGGACCCCAGTTCTCGATGATAAGGTTTTTCACAGCCTTCTTGATGCGC
GTCTGACGTTTGAGCCGTTGATGGGCGAGATCTTTCAATTTCATGTATTC
ACCTCCCGCCTCTCCGAGGAATACATCAGTCTCAACTACAGTCAACTTTC
CGACATACAATTCGAGCTCTCCTCCCGACTGAACCGATTCTCCATCGCAC
TTGAGTCCTTCCGCCTATCTTTCTTCCATCAACTCAGCCTCAATGCTCAA
CGAAGCCTGCACACCATGCAGTTGCACCAACAAGTACTTTCCATTGTCGT
ACATGTCTCCCTCATCGCCAACGAACACGATGCTTTAGACTTCTACAGTT
CCTCTTTCGAGCACGCACTGTCTCTTGCAGAATCTATCATCGCTAGCTTT
GCTGAACGTCCTAGTGTCTGTCTTGACATGGGCGTCATCCTCCCACTCTC
CTTCGTTGCGACAAGATGCCGTGAGCCCGATATACGTGCGCGTGCATTGG
AAGTCCTTCGCTCCTGGCCGCATCGTGAGGGCCCCTGGGAATCCTCTTTC
ATCGCCGACTGTGCTTCAAGACCATGGAACTCGGGAGATCCGTTTCTAGC
TATGCTGCCTTAAACGTATACAGTAGCCCGACTATGATGTTCCTAAAATT
CACCCAGCAGGCATGGAAAACTGTACATGCCTTTCGATCATAAAAGCTTT
TTGAACGGTTGGCCTCTTTCATGTTAACTAAATAAATCTTGATAGCCAAT
GACTGTCGGAGCTACATCCGAGGAAGACAA
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Coding sequence (CDS) from alignment at ch4:2966581..2968560-

>KJC3_005521-T1 ID=KJC3_005521-T1|Name=KJC3_005521-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch4:2966581..2968560- (Aspergillus niger KJC3)
ATTGCGCCATGTAAAATGTGATGAAACTCCAGGCATGTGCCAGCGCTGCA
CATCCACGGGCAGAAAGTGTGATGGATATGACGCAGAGCGACTACCCAAC
CGACGAACTACTGCCACATTGACCGAATTAGCACCTGATATTGCTCGTCG
CTTTAGGTGGAAGTTGACTTCCGATGAGCAACGTTGTATCTCATTCTTTC
AGAACCGAATTGGACCATCCATAGTCGCCTATTTTGACTGCGTTCTGTGG
CAACGGCTTGTCCTCCAACTTAGCCAGGTTGAGCCGGCTGCCTTTCATGC
GCTTGTCGCGTTTAGTGCTGTCTATGCGGATTATGAAGCCAGAGGTATAC
CTGTTGATAAGGATGATATGGATAATACGTTGCAACGATTTGCACTCGAC
CAGTGTGCGAGAGCGTACAGGTGGTTGAACTCACGCTCTGCTTCTCAGGA
TCCCGGATTCCGCGATATCATGCTAGTATGTTGTGTGCTATTCATCATGG
TAGAATGGATGCGCGGAGAGTATGACACTGCCACGATACACCTGAAGAAT
GGGCTCCGAATACTAGAGGATGACCAGACCTTGACGGCAGCAACTGCTGC
ATTCAGCTCCGTCTTCGGACAATGTCTAGGCGAATCACTTGCCTCCCTGA
AAGTCCAATCAACTTATTTTGGCATCGAAGAGCCAACACAACCACAGTCT
CCGAAGAGCTCCGACCCTGGGACCCCAGTTCTCGATGATAAGGTTTTTCA
CAGCCTTCTTGATGCGCGTCTGACGTTTGAGCCGTTGATGGGCGAGATCT
TTCAATTTCATGTATTCACCTCCCGCCTCTCCGAGGAATACATCAGTCTC
AACTACAGTCAACTTTCCGACATACAATTCGAGCTCTCCTCCCGACTGAA
CCGATTCTCCATCGCACTTGAGTCCTTCCGCCTATCTTTCTTCCATCAAC
TCAGCCTCAATGCTCAACGAAGCCTGCACACCATGCAGTTGCACCAACAA
GTACTTTCCATTGTCGTACATGTCTCCCTCATCGCCAACGAACACGATGC
TTTAGACTTCTACAGTTCCTCTTTCGAGCACGCACTGTCTCTTGCAGAAT
CTATCATCGCTAGCTTTGCTGAACGTCCTAGTGTCTGTCTTGACATGGGC
GTCATCCTCCCACTCTCCTTCGTTGCGACAAGATGCCGTGAGCCCGATAT
ACGTGCGCGTGCATTGGAAGTCCTTCGCTCCTGGCCGCATCGTGAGGGCC
CCTGGGAATCCTCTTTCATCGCCGACTGTGCTTCAAGACCATGGAACTCG
GGAGATCCGTTTCTAGCTATGCTGCCTTAAATGGAGAAGAACTGTCGAAG
GAGGAGATCCAGCAAAAAGAGCACGACGGGTTGTCGAACCTGTCGATTGC
GCCATGTAAAATGTGATGAAACTCCAGGCATGTGCCAGCGCTGCACATCC
ACGGGCAGAAAGTGTGATGGATATGACGCAGAGCGACTACCCAACCGACG
AACTACTGCCACATTGACCGAATTAGCACCTGATATTGCTCGTCGCTTTA
GGTGGAAGTTGACTTCCGATGAGCAACGTTGTATCTCATTCTTTCAGAAC
CGAATTGGACCATCCATAGTCGCCTATTTTGACTGCGTTCTGTGGCAACG
GCTTGTCCTCCAACTTAGCCAGGTTGAGCCGGCTGCCTTTCATGCGCTTG
TCGCGTTTAGTGCTGTCTATGCGGATTATGAAGCCAGAGGTATACCTGTT
GATAAGGATGATATGGATAATACGTTGCAACGATTTGCACTCGACCAGTG
TGCGAGAGCGTACAGGTGGTTGAACTCACGCTCTGCTTCTCAGGATCCCG
GATTCCGCGATATCATGCTAGTATGTTGTGTGCTATTCATCATGGTAGAA
TGGATGCGCGGAGAGTATGACACTGCCACGATACACCTGAAGAATGGGCT
CCGAATACTAGAGGATGACCAGACCTTGACGGCAGCAACTGCTGCATTCA
GCTCCGTCTTCGGACAATGTCTAGGCGAATCACTTGCCTCCCTGAAAGTC
CAATCAACTTATTTTGGCATCGAAGAGCCAACACAACCACAGTCTCCGAA
GAGCTCCGACCCTGGGACCCCAGTTCTCGATGATAAGGTTTTTCACAGCC
TTCTTGATGCGCGTCTGACGTTTGAGCCGTTGATGGGCGAGATCTTTCAA
TTTCATGTATTCACCTCCCGCCTCTCCGAGGAATACATCAGTCTCAACTA
CAGTCAACTTTCCGACATACAATTCGAGCTCTCCTCCCGACTGAACCGAT
TCTCCATCGCACTTGAGTCCTTCCGCCTATCTTTCTTCCATCAACTCAGC
CTCAATGCTCAACGAAGCCTGCACACCATGCAGTTGCACCAACAAGTACT
TTCCATTGTCGTACATGTCTCCCTCATCGCCAACGAACACGATGCTTTAG
ACTTCTACAGTTCCTCTTTCGAGCACGCACTGTCTCTTGCAGAATCTATC
ATCGCTAGCTTTGCTGAACGTCCTAGTGTCTGTCTTGACATGGGCGTCAT
CCTCCCACTCTCCTTCGTTGCGACAAGATGCCGTGAGCCCGATATACGTG
CGCGTGCATTGGAAGTCCTTCGCTCCTGGCCGCATCGTGAGGGCCCCTGG
GAATCCTCTTTCATCGCCGACTGTGCTTCAAGACCATGGAACTCGGGAGA
TCCGTTTCTAGCTATGCTGCCTTAAATGGAGAAGAACTGTCGAAGGAGGA
GATCCAGCAAAAAGAGCACGACGGGTTGTCGAACCTGTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005521KJC3_005521Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005521-T1KJC3_005521-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005521-T1.cdsKJC3_005521-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005521-T1.utr3p1KJC3_005521-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005521-T1.exon2KJC3_005521-T1.exon2Aspergillus niger KJC3exon
KJC3_005521-T1.exon1KJC3_005521-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005521-T1.utr5p1KJC3_005521-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2966581..2968560 -
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