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KJC3_005522-T1, KJC3_005522-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005522-T1
Unique NameKJC3_005522-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2969506..2970237+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005522-T1 ID=KJC3_005522-T1|Name=KJC3_005522-T1|organism=Aspergillus niger KJC3|type=mRNA|length=732bp|location=Sequence derived from alignment at ch4:2969506..2970237+ (Aspergillus niger KJC3)
ATGGCTTCTCCAAACCCCCAAACCAAAACAATCCCCCTACCTGGCCACTT
CCCCAACACCACCTCCGACGCCCAGCGCGTCTTCGATGTTCTCCAACTTG
GAGGCATCGCCATCGTCCCCACAGAAATCGGCTACGGCCTCCTAGCCTCG
TCCGTCGAGGCCATCGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCAGG
ACACGCCCATGGTCTAATCGGATCCTACGAGCTGCATCATGAACTGCACG
TTCTCGAACCCGAGAGGTTCGAAATGACGCGCGTTCTCACTCACGACCTC
GATATGGGCTTAGGCATCGTGGCTCCTTATAAAGCGGACCATCCCATTCT
GGCCAAATTTACACCGAAAACGCTAGCCAACGTGGTCAAGGATGACACGA
TAGCGATGTTTGTGGGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGCTG
AACTACGAGGCTGGACAGGTGATGGTCGGATCTAGTGCGAATCTAAGTGG
GGGAGGGCAGAAGTTCCTCGTTGAGGATATTGAGGAGGAGATTATAGAGG
TCGCGGATTTGATTGTTGATTATGGGTTGCAGAGGTATCATGTTTATGGG
AGGGCGTCGATTGTGATGGATTTTGGGGAGATGAAGGTTCTTCGTATGGG
GTCGTGCTATGAGCTTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGTGG
AGTTGCCAGAAGATCCAGTGTATAAGACTTAA
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Coding sequence (CDS) from alignment at ch4:2969506..2970237+

>KJC3_005522-T1 ID=KJC3_005522-T1|Name=KJC3_005522-T1|organism=Aspergillus niger KJC3|type=CDS|length=732bp|location=Sequence derived from alignment at ch4:2969506..2970237+ (Aspergillus niger KJC3)
ATGGCTTCTCCAAACCCCCAAACCAAAACAATCCCCCTACCTGGCCACTT
CCCCAACACCACCTCCGACGCCCAGCGCGTCTTCGATGTTCTCCAACTTG
GAGGCATCGCCATCGTCCCCACAGAAATCGGCTACGGCCTCCTAGCCTCG
TCCGTCGAGGCCATCGAGCGAGCTTTCTCCGCGAAACGACGTCGGCCAGG
ACACGCCCATGGTCTAATCGGATCCTACGAGCTGCATCATGAACTGCACG
TTCTCGAACCCGAGAGGTTCGAAATGACGCGCGTTCTCACTCACGACCTC
GATATGGGCTTAGGCATCGTGGCTCCTTATAAAGCGGACCATCCCATTCT
GGCCAAATTTACACCGAAAACGCTAGCCAACGTGGTCAAGGATGACACGA
TAGCGATGTTTGTGGGTGGGGGCTCGCTGTTACGGGAGATTTGTAGGCTG
AACTACGAGGCTGGACAGGTGATGGTCGGATCTAGTGCGAATCTAAGTGG
GGGAGGGCAGAAGTTCCTCGTTGAGGATATTGAGGAGGAGATTATAGAGG
TCGCGGATTTGATTGTTGATTATGGGTTGCAGAGGTATCATGTTTATGGG
AGGGCGTCGATTGTGATGGATTTTGGGGAGATGAAGGTTCTTCGTATGGG
GTCGTGCTATGAGCTTTTTAGGGAGAGGATGGGTAGGTTCTGGGGGGTGG
AGTTGCCAGAAGATCCAGTGTATAAGACTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003725double-stranded RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005522KJC3_005522Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005522-T1.exon1KJC3_005522-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005522-T1.cdsKJC3_005522-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005522-T1KJC3_005522-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR006070
DBxrefPFAM:PF01300
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2969506..2970237 +
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