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KJC3_005525-T1, KJC3_005525-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005525-T1
Unique NameKJC3_005525-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2974532..2975437+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005525-T1 ID=KJC3_005525-T1|Name=KJC3_005525-T1|organism=Aspergillus niger KJC3|type=mRNA|length=906bp|location=Sequence derived from alignment at ch4:2974532..2975437+ (Aspergillus niger KJC3)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGGTGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGTAGGTTCCTCCGATAATTGAGTTCA
GTGATCGAAACTAAATCTACAGGCTATCAACCCCGCGAGAGATTTCGGTC
CCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTTTACCGCGGCC
AACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAGGTTGTGTCGT
CGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCGCA
TCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGCTG
CACTAA
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Coding sequence (CDS) from alignment at ch4:2974532..2975437+

>KJC3_005525-T1 ID=KJC3_005525-T1|Name=KJC3_005525-T1|organism=Aspergillus niger KJC3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch4:2974532..2975437+ (Aspergillus niger KJC3)
ATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCATATGTCGC
CGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGGTGTCGTCG
CTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTATCGATCAAC
ATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCCGACCCCGG
TCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGTCCGTCCCA
CTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTCAATTTCTT
GGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGCTCCGCCAT
CAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAATCCTGAGCC
CTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTGCTGCATTC
TTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGGTCTGCAGT
TCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGCCGTCAGAT
TCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTATTGGAGCT
GCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGAGATTTCGG
TCCCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTTTACCGCGG
CCAACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAGGTTGTGTC
GTCGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGACGGGTCGCG
CATCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGCTCTGCGGC
TGCACTAAATGTTTCTCAACACTGGCCTCTCGCGAAAATTCCTCAAACCA
TATGTCGCCGAGTTCCTCGGAACGGCACTCCTGATCGTCATCGGCGATGG
TGTCGTCGCTCAGTGTCTCCTTTCCGACTACCAGTACGGCACCTGGCTAT
CGATCAACATCGCCTGGGCTGCAGCTGTCTGCATCTCAGGCTACCTTTCC
GACCCCGGTCCAACCATCAACCCAGCTGTGACTATCTGCATGGCTCTTGT
CCGTCCCACTCCCGGACAATGGCGTAAACTTCCCGGCAAGCTCTTTGCTC
AATTTCTTGGTGGATTTGTTGGTGCTGCCATTGTGTATATCAACTACCGC
TCCGCCATCAAAGACTGGGATCCCGAGTTTACCATTCCTGGCGGCTCAAT
CCTGAGCCCTCGTGGACACCATTCTGCCGGTATCTTCTCAACTTATCCTG
CTGCATTCTTCGAATCGAACTGGGAGGCCGCATTCTCGGAGTTGCTCGGG
TCTGCAGTTCTGATGTTTGGCATCTTGAGCATCTCGGATCCGGTCAATGC
CGTCAGATTCCATTCGCCTCAGGTGACGGTATTCTTCTTGCTCACTGCTA
TTGGAGCTGCGTTGGGCTGGCAGACTGGCTATGCTATCAACCCCGCGAGA
GATTTCGGTCCCAGACTGTTCTCTGCTTTCATCTATGGTAGGGAGGTTTT
TACCGCGGCCAACTATTACTTCGTTGTGCCCATTTTTGCCCCCATTGTAG
GTTGTGTCGTCGGAGCCGCCACTTACGACACATTCCTCTATGAGGGAGAC
GGGTCGCGCATCACCGATGCTTTGGACAATGTCGAGGATCGCGACGGTGC
TCTGCGGCTGCACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005525KJC3_005525Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005525-T1KJC3_005525-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005525-T1.exon1KJC3_005525-T1.exon1Aspergillus niger KJC3exon
KJC3_005525-T1.exon2KJC3_005525-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005525-T1.cdsKJC3_005525-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2974532..2975437 +
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