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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2990008..2993390- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005532-T1 ID=KJC3_005532-T1|Name=KJC3_005532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3383bp|location=Sequence derived from alignment at ch4:2990008..2993390- (Aspergillus niger KJC3)
CCTTAGCCTCCCTGACAGTTTGAACATCATGTCTCGTCGACAATATTATC
CAATCACTGATGACCATGTCGATGATCCCAAGGGCTAAACAGGCACTAAT
GCCCTGCGCTGTCCGATCGGCCCTTTGCTCCTCGGGCTTGCGGTGGCTGG
GCCCGAGGAGGCTGGGAGACATCACCGGCCGTATAACCAACCACCCCAAT
CGTGATACCAGCCCAATTCAACAGCGTCCCTTACCTTTTTGTTTGCTGCA
CTTGCCTCTTATTACCTCGTGGGCAGGTTCAGGGTCTGCATCTGAGGGAA
TGTTCATCGGACACATCCACAATCCGCACTGCAAGTGAGCTGTTCACCGC
ATACATTCCTCGGGTGATTTTCGGCCGCCATGCTCGCTCCGGGCTCTGGG
AATGTGAGTCTCAGAACTGTCAGTTGTAAGTTGACTCTGCATAACCTTGG
CACCCAGCCAAGGAAAAGCATGATGCGTCTTCGAATTCAGGCTGACCGAT
GACTGATCCCCTCACAGCTAATCGACCACAATTAATGCACACCCAGTCTC
AACAGTCCATCGCCGCCTCCGACGACTACTACTCTTTCTCAAGTCCATCC
TCAAGTGCAAGATCCCGAGCCAGTGGCAGTCGACTCACCGTGGCGCGGTA
TGCGACACCGAACTCTCATCCTCCGTCCCGAACACCGTCTCCTAGCATCT
CTCGGACGCATCTAGCCTCGCAGCCGGCTGGTGCACGATCGGAACATTCC
TTAAACGTTCCGAGTGAGAACAGGAATTTTGTTACACCCCCTTCTCAGAC
AATACGTGCAGTCGAAGAGGAAGATCCTGAGCCCAGCCCCATGTCAGATA
CCACGAGTCGCCGGGAACTCAGTGACAGCTATTCTGGGCGGCCGCCTACT
CCTGGGGTGGATGACTCGCCATACATTCATTTTGCCATCAGCCAGCTTAC
GCGTGATGAGGAAGTTGCTGGGCCCAGACGGCGAAGCTCGCTCGCCAGTA
ATGACAGTCCTCTCGAGCCACTGCTTTGGGATGAAGGATTGGGCTGCTTC
ATTCGCTCGCCTGGACAACCGGCAACCCCGCCAGCACGGCAACCGCAACA
ATCATCCGACTCTATCGGGAGGGCGCCCCAAAACTCGGTAGATCCAGAAT
CGTTCGTCGCGGTGGAACCTCCGCATGACAGCCTGCTGTACCCACCGTTG
GACTATGTGCCTATAGTATTACGGTCATGGGCTCTGGCTGCCATAATTAT
CTGTTGCCTGCTCATGATTGCTGGACTGAGCTTCTGCAATGTATGGTCGC
GGCGGCATGACGGGCTTTGGGACTATACGGGACTAGGGGGATCCCACTAC
TTTGTGATGCAATTCCTACCGCAAATCTTGGGCATGGTCATTACTATCTG
GACCTTCGTGATCCAAGCGGCAGTGTATAGAATAATGCCGTTTGCCATCA
TGGCTTCAGAGCGGCCGCTCGGCCACGTCCTTCAGAGCCTGCCTATCCTA
TCACGGAACTTCCTGATACCGGACTTCTCCTACTTTCGGCATGGCGAGGG
CATAGTCGGTTTCTCTTTGTTCACCATGTGGTTGTCAAACCTGATCACAC
TACCACTGCTAAGTTGCCTCTTCCAGGCTAAGTGGTACTTGATCGATGGA
CAAGGGACGTGGCGGTGGGCCTCGGTTTCGGCGGTTGGGTGGACCCTGGT
GGCCATCTATGCGTTGTTGACCATTGGCCTGCTCCTGCTCATGTTTCGTT
TTGTACGCACATGGTCGGGGTTGATGTGGGACCCTGTGAGTCTCGCCGAC
CTGATTTCAATCATCCAGCGATCGAACATCTTGCACGACTTTGAACAATC
GGAGACTCTGCCGAATGTCGGCGAATCGCTCGATCCGCGATTCCTCCGAT
TGGGCTACTGGAAACTATCAAACCGTGCGGATATATTCTATGGAATTGGC
GAGGTGGATGCACCGGTTCGGACGCCGTCATTACACCGAAAGGAGAAGAA
CCTTCAGATGCAGTCACATGGCCTGTCAAGGGTATCATTCGACATTGAGC
AGCATGGTCTCGCAGAGAAGGAAGAGTACTATCAGCATCTATACTCACCC
GCTATCCGCTATCGTTGGATCCCATGGTTTCTTCGCGACGGCTTTGTCGT
TCTATGGACGGTAATCATTTGCGCCTTGTTTATTGCATTCGTGTTGGTCA
GCTTCATCCACGGTGCGATCAAAGACGGATTCCCCCCGCGTTTGCCAACA
CTGCCATCTACTGGTGCATTTTCCTCTTCCAACTTTTGCTATAGCTTCAT
TCCTGCTTTCATTGGGAATGTCCTCTTCCTAGCATGGCAGCCGATCGACG
TCTATTTCCGTGCGTTGCAGCCTTTTGCAGCTCTAGCTTCCCCGACCGGT
GCTCGAGCAGAGCAGAGCCTTTTGTTGTCATACCCGTCCTGCTTTCCCTT
CCAGGTGACGCTAGTGGCGGTTTTGAACAAGCATTACAAAGTGGCCTGGG
TTTCATTCATGAGTACGGTGTCTGCGGCGATTCCTATCCTGGCCGGAGGG
ATGTTCATTGCCTTGTACCATCCGTCTGACGGGACGATCCTGATCTCTGC
TCTGATGCCTGCGTTCTATGCTATTGTGGCCTTCTGTGCACTATACATGG
TGTCTTTCCTGTGCATTTGGCCCCGTCGCTGCCGCCGCCTGCCACATGAC
ATTAGCACTTTGGCTGATCAGATGAGCTTCCTATACCAAAGCCCACTGCT
CGCCGATAAAATCCTGCGCGAGCCTCGGAGCAAGGCGGATCTGGTCACTC
GATTGGTCGTCGCGCCTCCTGGAGATCGGGAGCATTCTATGTACGGCTTT
GGCATCTATGTTGGTCGAGATGGCAAGGAGCATCTAGGAATTGATCGTTT
CGACCGTCCTGGCCGGGCGGATATGTTGATTACTACCGGATATTTACGAT
AGGATGCAGCTTGAGCATCCCAAAAAAAAGTCCTTGTACGATGACTGGGT
GGTTGTCTGCTGCTTGGATTGCATATATGCGGTTTTAGCCGCAGAGCTTG
ATATTTTGCGATGAATTATGCGTTATGAACAGCGATGAAAATTACGACAG
AGCTGTATACCCTTCAACTTTTGCATCAGATGACGCCTATTAATGATAAT
GTGGTATAGCGATGGACTTATGATTTGATGATGTTTCATGATTGATGTTG
TCTCTTTTTGTTCGTTCGGGACTTGTGAACTTTACGATGGAATTTATGTA
CTTGATATCCTCAACAGCTTTGGCGGGCGATGTGCCTGTTTACATGATTG
AAATGACTTTCACATTAACATGACTTTTCACTTCTATATGCTTGTGTCTG
ATTGTGTAGCCTTCAATGTATCACTATGCTAAC back to topCoding sequence (CDS) from alignment at ch4:2990008..2993390- >KJC3_005532-T1 ID=KJC3_005532-T1|Name=KJC3_005532-T1|organism=Aspergillus niger KJC3|type=CDS|length=4962bp|location=Sequence derived from alignment at ch4:2990008..2993390- (Aspergillus niger KJC3)
CTAATCGACCACAATTAATGCACACCCAGTCTCAACAGTCCATCGCCGCC
TCCGACGACTACTACTCTTTCTCAAGTCCATCCTCAAGTGCAAGATCCCG
AGCCAGTGGCAGTCGACTCACCGTGGCGCGGTATGCGACACCGAACTCTC
ATCCTCCGTCCCGAACACCGTCTCCTAGCATCTCTCGGACGCATCTAGCC
TCGCAGCCGGCTGGTGCACGATCGGAACATTCCTTAAACGTTCCGAGTGA
GAACAGGAATTTTGTTACACCCCCTTCTCAGACAATACGTGCAGTCGAAG
AGGAAGATCCTGAGCCCAGCCCCATGTCAGATACCACGAGTCGCCGGGAA
CTCAGTGACAGCTATTCTGGGCGGCCGCCTACTCCTGGGGTGGATGACTC
GCCATACATTCATTTTGCCATCAGCCAGCTTACGCGTGATGAGGAAGTTG
CTGGGCCCAGACGGCGAAGCTCGCTCGCCAGTAATGACAGTCCTCTCGAG
CCACTGCTTTGGGATGAAGGATTGGGCTGCTTCATTCGCTCGCCTGGACA
ACCGGCAACCCCGCCAGCACGGCAACCGCAACAATCATCCGACTCTATCG
GGAGGGCGCCCCAAAACTCGGTAGATCCAGAATCGTTCGTCGCGGTGGAA
CCTCCGCATGACAGCCTGCTGTACCCACCGTTGGACTATGTGCCTATAGT
ATTACGGTCATGGGCTCTGGCTGCCATAATTATCTGTTGCCTGCTCATGA
TTGCTGGACTGAGCTTCTGCAATGTATGGTCGCGGCGGCATGACGGGCTT
TGGGACTATACGGGACTAGGGGGATCCCACTACTTTGTGATGCAATTCCT
ACCGCAAATCTTGGGCATGGTCATTACTATCTGGACCTTCGTGATCCAAG
CGGCAGTGTATAGAATAATGCCGTTTGCCATCATGGCTTCAGAGCGGCCG
CTCGGCCACGTCCTTCAGAGCCTGCCTATCCTATCACGGAACTTCCTGAT
ACCGGACTTCTCCTACTTTCGGCATGGCGAGGGCATAGTCGGTTTCTCTT
TGTTCACCATGTGGTTGTCAAACCTGATCACACTACCACTGCTAAGTTGC
CTCTTCCAGGCTAAGTGGTACTTGATCGATGGACAAGGGACGTGGCGGTG
GGCCTCGGTTTCGGCGGTTGGGTGGACCCTGGTGGCCATCTATGCGTTGT
TGACCATTGGCCTGCTCCTGCTCATGTTTCGTTTTGTACGCACATGGTCG
GGGTTGATGTGGGACCCTGTGAGTCTCGCCGACCTGATTTCAATCATCCA
GCGATCGAACATCTTGCACGACTTTGAACAATCGGAGACTCTGCCGAATG
TCGGCGAATCGCTCGATCCGCGATTCCTCCGATTGGGCTACTGGAAACTA
TCAAACCGTGCGGATATATTCTATGGAATTGGCGAGGTGGATGCACCGGT
TCGGACGCCGTCATTACACCGAAAGGAGAAGAACCTTCAGATGCAGTCAC
ATGGCCTGTCAAGGGTATCATTCGACATTGAGCAGCATGGTCTCGCAGAG
AAGGAAGAGTACTATCAGCATCTATACTCACCCGCTATCCGCTATCGTTG
GATCCCATGGTTTCTTCGCGACGGCTTTGTCGTTCTATGGACGGTAATCA
TTTGCGCCTTGTTTATTGCATTCGTGTTGGTCAGCTTCATCCACGGTGCG
ATCAAAGACGGATTCCCCCCGCGTTTGCCAACACTGCCATCTACTGGTGC
ATTTTCCTCTTCCAACTTTTGCTATAGCTTCATTCCTGCTTTCATTGGGA
ATGTCCTCTTCCTAGCATGGCAGCCGATCGACGTCTATTTCCGTGCGTTG
CAGCCTTTTGCAGCTCTAGCTTCCCCGACCGGTGCTCGAGCAGAGCAGAG
CCTTTTGTTGTCATACCCGTCCTGCTTTCCCTTCCAGGTGACGCTAGTGG
CGGTTTTGAACAAGCATTACAAAGTGGCCTGGGTTTCATTCATGAGTACG
GTGTCTGCGGCGATTCCTATCCTGGCCGGAGGGATGTTCATTGCCTTGTA
CCATCCGTCTGACGGGACGATCCTGATCTCTGCTCTGATGCCTGCGTTCT
ATGCTATTGTGGCCTTCTGTGCACTATACATGGTGTCTTTCCTGTGCATT
TGGCCCCGTCGCTGCCGCCGCCTGCCACATGACATTAGCACTTTGGCTGA
TCAGATGAGCTTCCTATACCAAAGCCCACTGCTCGCCGATAAAATCCTGC
GCGAGCCTCGGAGCAAGGCGGATCTGGTCACTCGATTGGTCGTCGCGCCT
CCTGGAGATCGGGAGCATTCTATGTACGGCTTTGGCATCTATGTTGGTCG
AGATGGCAAGGAGCATCTAGGAATTGATCGTTTCGACCGTCCTGGCCGGG
CGGATATGTTGATTACTACCGGATATTTACGATAGATGCTCGCTCCGGGC
TCTGGGAATGTGAGTCTCAGAACTGTCAGTTCTAATCGACCACAATTAAT
GCACACCCAGTCTCAACAGTCCATCGCCGCCTCCGACGACTACTACTCTT
TCTCAAGTCCATCCTCAAGTGCAAGATCCCGAGCCAGTGGCAGTCGACTC
ACCGTGGCGCGGTATGCGACACCGAACTCTCATCCTCCGTCCCGAACACC
GTCTCCTAGCATCTCTCGGACGCATCTAGCCTCGCAGCCGGCTGGTGCAC
GATCGGAACATTCCTTAAACGTTCCGAGTGAGAACAGGAATTTTGTTACA
CCCCCTTCTCAGACAATACGTGCAGTCGAAGAGGAAGATCCTGAGCCCAG
CCCCATGTCAGATACCACGAGTCGCCGGGAACTCAGTGACAGCTATTCTG
GGCGGCCGCCTACTCCTGGGGTGGATGACTCGCCATACATTCATTTTGCC
ATCAGCCAGCTTACGCGTGATGAGGAAGTTGCTGGGCCCAGACGGCGAAG
CTCGCTCGCCAGTAATGACAGTCCTCTCGAGCCACTGCTTTGGGATGAAG
GATTGGGCTGCTTCATTCGCTCGCCTGGACAACCGGCAACCCCGCCAGCA
CGGCAACCGCAACAATCATCCGACTCTATCGGGAGGGCGCCCCAAAACTC
GGTAGATCCAGAATCGTTCGTCGCGGTGGAACCTCCGCATGACAGCCTGC
TGTACCCACCGTTGGACTATGTGCCTATAGTATTACGGTCATGGGCTCTG
GCTGCCATAATTATCTGTTGCCTGCTCATGATTGCTGGACTGAGCTTCTG
CAATGTATGGTCGCGGCGGCATGACGGGCTTTGGGACTATACGGGACTAG
GGGGATCCCACTACTTTGTGATGCAATTCCTACCGCAAATCTTGGGCATG
GTCATTACTATCTGGACCTTCGTGATCCAAGCGGCAGTGTATAGAATAAT
GCCGTTTGCCATCATGGCTTCAGAGCGGCCGCTCGGCCACGTCCTTCAGA
GCCTGCCTATCCTATCACGGAACTTCCTGATACCGGACTTCTCCTACTTT
CGGCATGGCGAGGGCATAGTCGGTTTCTCTTTGTTCACCATGTGGTTGTC
AAACCTGATCACACTACCACTGCTAAGTTGCCTCTTCCAGGCTAAGTGGT
ACTTGATCGATGGACAAGGGACGTGGCGGTGGGCCTCGGTTTCGGCGGTT
GGGTGGACCCTGGTGGCCATCTATGCGTTGTTGACCATTGGCCTGCTCCT
GCTCATGTTTCGTTTTGTACGCACATGGTCGGGGTTGATGTGGGACCCTG
TGAGTCTCGCCGACCTGATTTCAATCATCCAGCGATCGAACATCTTGCAC
GACTTTGAACAATCGGAGACTCTGCCGAATGTCGGCGAATCGCTCGATCC
GCGATTCCTCCGATTGGGCTACTGGAAACTATCAAACCGTGCGGATATAT
TCTATGGAATTGGCGAGGTGGATGCACCGGTTCGGACGCCGTCATTACAC
CGAAAGGAGAAGAACCTTCAGATGCAGTCACATGGCCTGTCAAGGGTATC
ATTCGACATTGAGCAGCATGGTCTCGCAGAGAAGGAAGAGTACTATCAGC
ATCTATACTCACCCGCTATCCGCTATCGTTGGATCCCATGGTTTCTTCGC
GACGGCTTTGTCGTTCTATGGACGGTAATCATTTGCGCCTTGTTTATTGC
ATTCGTGTTGGTCAGCTTCATCCACGGTGCGATCAAAGACGGATTCCCCC
CGCGTTTGCCAACACTGCCATCTACTGGTGCATTTTCCTCTTCCAACTTT
TGCTATAGCTTCATTCCTGCTTTCATTGGGAATGTCCTCTTCCTAGCATG
GCAGCCGATCGACGTCTATTTCCGTGCGTTGCAGCCTTTTGCAGCTCTAG
CTTCCCCGACCGGTGCTCGAGCAGAGCAGAGCCTTTTGTTGTCATACCCG
TCCTGCTTTCCCTTCCAGGTGACGCTAGTGGCGGTTTTGAACAAGCATTA
CAAAGTGGCCTGGGTTTCATTCATGAGTACGGTGTCTGCGGCGATTCCTA
TCCTGGCCGGAGGGATGTTCATTGCCTTGTACCATCCGTCTGACGGGACG
ATCCTGATCTCTGCTCTGATGCCTGCGTTCTATGCTATTGTGGCCTTCTG
TGCACTATACATGGTGTCTTTCCTGTGCATTTGGCCCCGTCGCTGCCGCC
GCCTGCCACATGACATTAGCACTTTGGCTGATCAGATGAGCTTCCTATAC
CAAAGCCCACTGCTCGCCGATAAAATCCTGCGCGAGCCTCGGAGCAAGGC
GGATCTGGTCACTCGATTGGTCGTCGCGCCTCCTGGAGATCGGGAGCATT
CTATGTACGGCTTTGGCATCTATGTTGGTCGAGATGGCAAGGAGCATCTA
GGAATTGATCGTTTCGACCGTCCTGGCCGGGCGGATATGTTGATTACTAC
CGGATATTTACGATAGATGCTCGCTCCGGGCTCTGGGAATGTGAGTCTCA
GAACTGTCAGTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005532-T1.utr3p1 | KJC3_005532-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005532-T1.utr5p1 | KJC3_005532-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021840 |
| DBxref | PFAM:PF11915 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2990008..2993390 - |
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