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KJC3_005537-T1, KJC3_005537-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005537-T1
Unique NameKJC3_005537-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3010748..3012014+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005537-T1 ID=KJC3_005537-T1|Name=KJC3_005537-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1267bp|location=Sequence derived from alignment at ch4:3010748..3012014+ (Aspergillus niger KJC3)
TATATCGAACACTCCTTTCTATCAACCGGCGCGCAACTCGTATCCTAACT
TTCGTTAAAAGCTCATCGCAACAACCATGGCGCCTTACTATATGGTCCTC
GACCAACGGGCCGTCGATCACCATATAATGAAGCGCGATCTCAGCGTTAC
GCACGCCCAGGCAGTAACATTAGGCGTGATGGCAGCGTATGTGGTTGTTA
TCGCGCTGCTTTGGAATTTACCGTATGTGCGGTGGTCGTTGTGGCCGTTT
AAGGTAATAACCAACCCCCTCACCCATTCTCTTCCTACCCCAGAATCATG
AATGCTAACAAAGAATAGATGCTCGTCATCGCCTTCCACGAATTCGGCCA
CGCCATAACAGCCTGCTGCACCGGCGGGCGTGTGAAATCCATCTCGCTTG
ACCCGCACGAAGGCGGCGTCACGCACATGCAGGGAGGAATGAGCGCCGTG
ACATTACCTGCTGGATACCTCGGGTCGTCGATTATCGGCTCGCTGTTGAT
TTTCGCGGGGTTCGATATCGTCGCGAGTAAAGTCGCTAGTATTGTTCTGG
GGGTGTGCTTTTTGCTCACGCTTTGGTGGGCACGGAGGGATTGGTTGACT
ATTATTACTATTTTGCTGGCGGTGGGGTTGCTGGTCGCTTGTTGGTTTAT
TGCGCATGGGGAGGCGTTGAAGTGGGTTGTGGTATGTTCCCTTTCTTCTT
TTTGTTTTGTTCATTGTATGAGGACGGTGTGCTGACATGCGGGATATAGC
TGTTTATTGGGGTTATGTCTGCACTTTATAGTGTCTGGGATATTGTGAGT
TCTCTTATATCTTTCCTTGTCATCTTTGATGTGGTATGATGGCGGTGATG
TGCTAACTGCAAGTATAGTGTGACGACCTTATCCTTCGCAAAGTCAACAC
CTCCGATGCTAGCCAGTTCGCTAAGAGATACGGAGGATCCTCGCAGTGCT
GGGGTGTTATCTGGTCGTTTATTTCCCTTGCGTTCATTGCGATCGCTATC
ATTGCTGCGATTGCTGCGTTCCGTGAGTCGTTCAGCGAGCAGGAGAAGGA
TTCGCAGCATTTCATCCCGACTCGGTGATCGACTGATTAGCTTGATTTAC
GTTTTCTAATGAGGTATGAAACGTGCAGTCATGATGGGTGATTGGCCTGA
GGTTGAGGATTGGGGTTTTTCGGTTAATGTGATACCACTTTGTTTTTGTT
TTGATCGTCTGCTGGCAGATAAAATGTATTAAGATTGAAGTAACTCCGGA
CCAATGCTAGGATTGTT
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Coding sequence (CDS) from alignment at ch4:3010748..3012014+

>KJC3_005537-T1 ID=KJC3_005537-T1|Name=KJC3_005537-T1|organism=Aspergillus niger KJC3|type=CDS|length=3180bp|location=Sequence derived from alignment at ch4:3010748..3012014+ (Aspergillus niger KJC3)
ATGGCGCCTTACTATATGGTCCTCGACCAACGGGCCGTCGATCACCATAT
AATGAAGCGCGATCTCAGCGTTACGCACGCCCAGGCAGTAACATTAGGCG
TGATGGCAGCGTATGTGGTTGTTATCGCGCTGCTTTGGAATTTACCGTAT
GTGCGGTGGTCGTTGTGGCCGTTTAAGATGCTCGTCATCGCCTTCCACGA
ATTCGGCCACGCCATAACAGCCTGCTGCACCGGCGGGCGTGTGAAATCCA
TCTCGCTTGACCCGCACGAAGGCGGCGTCACGCACATGCAGGGAGGAATG
AGCGCCGTGACATTACCTGCTGGATACCTCGGGTCGTCGATTATCGGCTC
GCTGTTGATTTTCGCGGGGTTCGATATCGTCGCGAGTAAAGTCGCTAGTA
TTGTTCTGGGGGTGTGCTTTTTGCTCACGCTTTGGTGGGCACGGAGGGAT
TGGTTGACTATTATTACTATTTTGCTGGCGGTGGGGTTGCTGGTCGCTTG
TTGGTTTATTGCGCATGGGGAGGCGTTGAAGTGGGTTGTGCTGTTTATTG
GGGTTATGTCTGCACTTTATAGTGTCTGGGATATTTGTGACGACCTTATC
CTTCGCAAAGTCAACACCTCCGATGCTAGCCAGTTCGCTAAGAGATACGG
AGGATCCTCGCAGTGCTGGGGTGTTATCTGGTCGTTTATTTCCCTTGCGT
TCATTGCGATCGCTATCATTGCTGCGATTGCTGCGTTCCGTGAGTCGTTC
AGCGAGCAGGAGAAGGATTCGCAGCATTTCATCCCGACTCGGTGAATGGC
GCCTTACTATATGGTCCTCGACCAACGGGCCGTCGATCACCATATAATGA
AGCGCGATCTCAGCGTTACGCACGCCCAGGCAGTAACATTAGGCGTGATG
GCAGCGTATGTGGTTGTTATCGCGCTGCTTTGGAATTTACCGTATGTGCG
GTGGTCGTTGTGGCCGTTTAAGATGCTCGTCATCGCCTTCCACGAATTCG
GCCACGCCATAACAGCCTGCTGCACCGGCGGGCGTGTGAAATCCATCTCG
CTTGACCCGCACGAAGGCGGCGTCACGCACATGCAGGGAGGAATGAGCGC
CGTGACATTACCTGCTGGATACCTCGGGTCGTCGATTATCGGCTCGCTGT
TGATTTTCGCGGGGTTCGATATCGTCGCGAGTAAAGTCGCTAGTATTGTT
CTGGGGGTGTGCTTTTTGCTCACGCTTTGGTGGGCACGGAGGGATTGGTT
GACTATTATTACTATTTTGCTGGCGGTGGGGTTGCTGGTCGCTTGTTGGT
TTATTGCGCATGGGGAGGCGTTGAAGTGGGTTGTGCTGTTTATTGGGGTT
ATGTCTGCACTTTATAGTGTCTGGGATATTTGTGACGACCTTATCCTTCG
CAAAGTCAACACCTCCGATGCTAGCCAGTTCGCTAAGAGATACGGAGGAT
CCTCGCAGTGCTGGGGTGTTATCTGGTCGTTTATTTCCCTTGCGTTCATT
GCGATCGCTATCATTGCTGCGATTGCTGCGTTCCGTGAGTCGTTCAGCGA
GCAGGAGAAGGATTCGCAGCATTTCATCCCGACTCGGTGAATGGCGCCTT
ACTATATGGTCCTCGACCAACGGGCCGTCGATCACCATATAATGAAGCGC
GATCTCAGCGTTACGCACGCCCAGGCAGTAACATTAGGCGTGATGGCAGC
GTATGTGGTTGTTATCGCGCTGCTTTGGAATTTACCGTATGTGCGGTGGT
CGTTGTGGCCGTTTAAGATGCTCGTCATCGCCTTCCACGAATTCGGCCAC
GCCATAACAGCCTGCTGCACCGGCGGGCGTGTGAAATCCATCTCGCTTGA
CCCGCACGAAGGCGGCGTCACGCACATGCAGGGAGGAATGAGCGCCGTGA
CATTACCTGCTGGATACCTCGGGTCGTCGATTATCGGCTCGCTGTTGATT
TTCGCGGGGTTCGATATCGTCGCGAGTAAAGTCGCTAGTATTGTTCTGGG
GGTGTGCTTTTTGCTCACGCTTTGGTGGGCACGGAGGGATTGGTTGACTA
TTATTACTATTTTGCTGGCGGTGGGGTTGCTGGTCGCTTGTTGGTTTATT
GCGCATGGGGAGGCGTTGAAGTGGGTTGTGCTGTTTATTGGGGTTATGTC
TGCACTTTATAGTGTCTGGGATATTTGTGACGACCTTATCCTTCGCAAAG
TCAACACCTCCGATGCTAGCCAGTTCGCTAAGAGATACGGAGGATCCTCG
CAGTGCTGGGGTGTTATCTGGTCGTTTATTTCCCTTGCGTTCATTGCGAT
CGCTATCATTGCTGCGATTGCTGCGTTCCGTGAGTCGTTCAGCGAGCAGG
AGAAGGATTCGCAGCATTTCATCCCGACTCGGTGAATGGCGCCTTACTAT
ATGGTCCTCGACCAACGGGCCGTCGATCACCATATAATGAAGCGCGATCT
CAGCGTTACGCACGCCCAGGCAGTAACATTAGGCGTGATGGCAGCGTATG
TGGTTGTTATCGCGCTGCTTTGGAATTTACCGTATGTGCGGTGGTCGTTG
TGGCCGTTTAAGATGCTCGTCATCGCCTTCCACGAATTCGGCCACGCCAT
AACAGCCTGCTGCACCGGCGGGCGTGTGAAATCCATCTCGCTTGACCCGC
ACGAAGGCGGCGTCACGCACATGCAGGGAGGAATGAGCGCCGTGACATTA
CCTGCTGGATACCTCGGGTCGTCGATTATCGGCTCGCTGTTGATTTTCGC
GGGGTTCGATATCGTCGCGAGTAAAGTCGCTAGTATTGTTCTGGGGGTGT
GCTTTTTGCTCACGCTTTGGTGGGCACGGAGGGATTGGTTGACTATTATT
ACTATTTTGCTGGCGGTGGGGTTGCTGGTCGCTTGTTGGTTTATTGCGCA
TGGGGAGGCGTTGAAGTGGGTTGTGCTGTTTATTGGGGTTATGTCTGCAC
TTTATAGTGTCTGGGATATTTGTGACGACCTTATCCTTCGCAAAGTCAAC
ACCTCCGATGCTAGCCAGTTCGCTAAGAGATACGGAGGATCCTCGCAGTG
CTGGGGTGTTATCTGGTCGTTTATTTCCCTTGCGTTCATTGCGATCGCTA
TCATTGCTGCGATTGCTGCGTTCCGTGAGTCGTTCAGCGAGCAGGAGAAG
GATTCGCAGCATTTCATCCCGACTCGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005537KJC3_005537Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005537-T1KJC3_005537-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005537-T1.utr5p1KJC3_005537-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005537-T1.exon1KJC3_005537-T1.exon1Aspergillus niger KJC3exon
KJC3_005537-T1.exon2KJC3_005537-T1.exon2Aspergillus niger KJC3exon
KJC3_005537-T1.exon3KJC3_005537-T1.exon3Aspergillus niger KJC3exon
KJC3_005537-T1.exon4KJC3_005537-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005537-T1.cdsKJC3_005537-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005537-T1.utr3p1KJC3_005537-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF13398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3010748..3012014 +
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