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KJC3_005541-T1, KJC3_005541-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005541-T1
Unique NameKJC3_005541-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3017336..3018506-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005541-T1 ID=KJC3_005541-T1|Name=KJC3_005541-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1171bp|location=Sequence derived from alignment at ch4:3017336..3018506- (Aspergillus niger KJC3)
ATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATACCGG
CCTCCCACAGAACAACTGGAGTACACCTGGTCGAGCCGCATACGACTTCC
GGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATCGTC
AACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAACTA
TTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCCTTA
CTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTCACC
ACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATTCTGAACAT
GGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTGTCA
TCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCACTTT
GTTTTCAAGAAAGATATCTGTGAGTGATATGACGTGTTGATTTACTTGTG
CTAATACTGCGTGCATAGATGACTGCCCCACTCGCGTTATAAGCCTCGAG
AATACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATATCTC
AATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGATGGAG
CAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAGTGAGTTT
TGTGCCTGCTTTGACAGCGTTTCACTGTGCTTCACCAAGGGTCTGGGAGC
ACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGGGCAA
GGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGATCATT
TCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCAAGCT
GAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAACGTC
TAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGATGAAC
CTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAAAAGA
GCTAGGGCTCAAGGTGCACGAGAAAGAGCGCTTAGAAGGACGATTGGTAG
TGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGCGATG
AGGGCTGCATTGAGTTGTTGA
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Coding sequence (CDS) from alignment at ch4:3017336..3018506-

>KJC3_005541-T1 ID=KJC3_005541-T1|Name=KJC3_005541-T1|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch4:3017336..3018506- (Aspergillus niger KJC3)
ATGACTGCCCCACTCGCGTTATAAGCCTCGAGAATACCCTCTTCGGAACG
ATTATGCCCCTTGACGAAATCCGAGATATCTCAATGTGGGCTAAGACCCA
AGACCCACCGGTTCACATGCATCTCGATGGAGCAAGACTTTGGGAGGCCG
TCGCTGCAGGTGCAGGTGCTCTTAGTGAGTTTTGTGCCTGCTTTGACAGC
GTTTCACTGTGCTTCACCAAGGGTCTGGGAGCACCCATCGGATCTGTGAT
TGTAGGAAACACAGAATTCATCACAAGGGCAAGGTGGATGCGTAAGCTGC
TCGGTGGTGGACTGCGCCAAACAGGGATCATTTCGGCGCCGATGTGCGTT
GCACTCGAGGAAGTGTTCTTAGGGGGCAAGCTGAAACGGTGTCAAGAGAG
AGCGAAATATATCTCTACAATGTGGGAACGTCTAGGTGGGTCTTTGCTAA
GACCCACAGAGACAAACATGATGTGGATGAACCTGAACGATGGAAATGTC
GACAAGAAAGCATTCCAAAAAGTAGCAAAAGAGCTAGGGCTCAAGGTGCA
CGAGAAAGAGCGCTTAGAAGGACGATTGGTAGTGCATTATCAGATATCTG
ATGACGCTATCAAGAAGTTGGAAATTGCGATGAGGGCTGCATTGAGTTGT
TGAATGACTATTGTCCGTCAGACCGAACACCCAGTGGAGGTCCATGATAC
CGGCCTCCCACAGAACAACTGGAGTACACCTGGTCGAGCCGCATACGACT
TCCGGTCTGATTTCGTTACCTCCCCGAATATGAGCATGCTCGAATCCATC
GTCAACACAACACTTCTCGACGATGAGATGATGGAGGATCCAACCACTAA
CTATTTCCAGGAGTGGATGGCTCAGTTGACAGGCCATGAAAGGGCGCTCC
TTACTTATTCGGGAACTATGAGCAACCAGGTGGCACTCCGGACGGCTCTC
ACCACCCCACCATACTCCATCCTTGCAGACCATCGCAGCCATATTCTGAA
CATGGAGGCAGGTGGGGCAGCGACTGTTTGTGGCGCTCTAATTCACGGTG
TCATCCCAGCAAATGGCCATCATTTGACGCTGGAAGACATCAAGAAGCAC
TTTGTTTTCAAGAAAGATATCTATGACTGCCCCACTCGCGTTATAAGCCT
CGAGAATACCCTCTTCGGAACGATTATGCCCCTTGACGAAATCCGAGATA
TCTCAATGTGGGCTAAGACCCAAGACCCACCGGTTCACATGCATCTCGAT
GGAGCAAGACTTTGGGAGGCCGTCGCTGCAGGTGCAGGTGCTCTTAGTGA
GTTTTGTGCCTGCTTTGACAGCGTTTCACTGTGCTTCACCAAGGGTCTGG
GAGCACCCATCGGATCTGTGATTGTAGGAAACACAGAATTCATCACAAGG
GCAAGGTGGATGCGTAAGCTGCTCGGTGGTGGACTGCGCCAAACAGGGAT
CATTTCGGCGCCGATGTGCGTTGCACTCGAGGAAGTGTTCTTAGGGGGCA
AGCTGAAACGGTGTCAAGAGAGAGCGAAATATATCTCTACAATGTGGGAA
CGTCTAGGTGGGTCTTTGCTAAGACCCACAGAGACAAACATGATGTGGAT
GAACCTGAACGATGGAAATGTCGACAAGAAAGCATTCCAAAAAGTAGCAA
AAGAGCTAGGGCTCAAGGTGCACGAGAAAGAGCGCTTAGAAGGACGATTG
GTAGTGCATTATCAGATATCTGATGACGCTATCAAGAAGTTGGAAATTGC
GATGAGGGCTGCATTGAGTTGTTGAATGACTATTGTCCGTCAGACCGAAC
ACCCAGTGGAGGTCCATGATACCGGCCTCCCACAGAACAACTGGAGTACA
CCTGGTCGAGCCGCATACGACTTCCGGTCTGATTTCGTTACCTCCCCGAA
TATGAGCATGCTCGAATCCATCGTCAACACAACACTTCTCGACGATGAGA
TGATGGAGGATCCAACCACTAACTATTTCCAGGAGTGGATGGCTCAGTTG
ACAGGCCATGAAAGGGCGCTCCTTACTTATTCGGGAACTATGAGCAACCA
GGTGGCACTCCGGACGGCTCTCACCACCCCACCATACTCCATCCTTGCAG
ACCATCGCAGCCATATTCTGAACATGGAGGCAGGTGGGGCAGCGACTGTT
TGTGGCGCTCTAATTCACGGTGTCATCCCAGCAAATGGCCATCATTTGAC
GCTGGAAGACATCAAGAAGCACTTTGTTTTCAAGAAAGATATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005541KJC3_005541Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005541-T1KJC3_005541-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005541-T1.cdsKJC3_005541-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005541-T1.exon2KJC3_005541-T1.exon2Aspergillus niger KJC3exon
KJC3_005541-T1.exon1KJC3_005541-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR001597
DBxrefInterPro:IPR023603
DBxrefPFAM:PF01212
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3017336..3018506 -
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