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KJC3_005547-T1, KJC3_005547-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005547-T1
Unique NameKJC3_005547-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3037312..3039300-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005547-T1 ID=KJC3_005547-T1|Name=KJC3_005547-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1989bp|location=Sequence derived from alignment at ch4:3037312..3039300- (Aspergillus niger KJC3)
CTACGGTGGTCGATGCTGGTCTCGGTTGATTGATATGGCCCTTTTGTAAT
CCTCCCACTTTACCTTCAATCTGTGCCTCTCCGCTCTCTTTCTATCCTAA
GCTGTACCGCCACCACTCAACGGACACGTCTTCAGTTGCCTCCTTATCGA
TTAGATCGACTCCGTGGAATCTCACGTTGCGCATTCGTTCTGCATTCGGC
TATACCCCTGTACATCTTCGCCTGCATTGCGACCGACTACCAACTTCTCG
TTCTTTCGCCTAATTCCTATTGATCCTAAATCTACCTTCACAATGACCGG
CCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAG
CCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTT
TTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGG
TGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAG
GCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGTGTGAGTGA
CTTTTGGACGGTCAGATGAATGGCGCTAATATTATTCGCAGTGGCCAAGC
GAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTT
GTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCA
AGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGCGGACC
AGGAAGGAGAGCATAATGACAATGTACGTGCGACCAATATAAAGACCGGA
ATGAAGCTAATGGGTTTAGGTGGTTGTCATGCTACAAGGAAAATTGGCAG
ATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATC
CAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAA
GACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACTTTACAACA
CATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACT
CTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGA
TCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGCCTATATCC
AAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTG
GGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACAT
GATCCAGCGGATAGATGCCAACACGGAAGACGTGGTGGATAACGTGCAGG
GAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGA
TGGCTCATCGCCAAGATGTTTGGCGTTCTAATGGTAAGCTCATCCCGTAA
CTTGGTGGTCGAATGGCAGCTAACTTGTGCAGATCTTCTTCCTACTCTGG
GTGTTGATATCGGGATAGACACACCCATTCTTTTCTATTATACTGTATTA
ATACTGGTTCATGTTCGTCCTGCTGTGCTGAACGAATAATGCAACCGTTT
CGTCGCTTAGCCTTGCATTCTTTGTCTCCTACCTTGTTTGGCCGTGGCTA
GATCTGATGATCGATCTTCTACTATTTACTTTATGTGCTTCGGATGGCCT
GATGTGAATACGGTCCATGATTGACTAGATCAATTTATTCATTCCATTGT
TTATTCTTCTTGTCGTGTCGACATCATTCATTGGCTGCTGAGTCTATTCA
ATAAGTTTTGGATAGATGAAGCAGATGGATGACATCCAGTGCATTCCTAT
GCTATCATTCCCCTAAGAACAACTATTCACGTATCCCATAGTATATATAA
GCTTCTTTCTTTCCTTCTCTTCTCTTCTTCTTCCTGAAATAATTTCTTTA
AACTCACAAAATAAGCCCACCCTATCTATACTAGATAAAAGTTCAAAAGA
TCCCAGATAAAATGCTAGCTTCCGACTTTTTGGATGGCC
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Coding sequence (CDS) from alignment at ch4:3037312..3039300-

>KJC3_005547-T1 ID=KJC3_005547-T1|Name=KJC3_005547-T1|organism=Aspergillus niger KJC3|type=CDS|length=4128bp|location=Sequence derived from alignment at ch4:3037312..3039300- (Aspergillus niger KJC3)
ATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAGGTGGTTGTCATGCT
ACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAG
TGCGCACAAAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTC
TCCTCAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGA
TTCCCCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCG
CTTCCGATCTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGC
CCCTCCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGAC
GAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAAC
GCACCATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTC
AGCGAGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGACGT
GGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGC
GGGTATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATG
TGGCCAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAG
TTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGC
CTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGA
AGGCGGACCAGGAAGGAGAGCATAATGACAATATGACCGGCCCGTCCATC
CAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCG
CATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATG
CGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGGTGGCAAACGA
CGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGC
GACGACTGCGAAGCTGCAGAGACTGGCCGAGTATCTTCTTCCTACTCTGG
GTGTTGATATCGGGATAGGTGGTTGTCATGCTACAAGGAAAATTGGCAGA
TGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCGCACAAAGAACATCC
AGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCTCAGTATCCTCAAAG
ACACATTCTGCCCTCGATACGCAGCGCTCCGATTCCCCACTTTACAACAC
ATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTCCGATCTACTGACTC
TGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCTCCATGCACTCAGAT
CAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGCAACGCCTATATCCA
AGGGCGTGGTGAGGCAATTGATGCGATTGAACGCACCATCAGCGAGCTGG
GTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCGAGCAGTCCGACATG
ATCCAGCGGATAGATGCCAACACGGAAGACGTGGTGGATAACGTGCAGGG
AGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGTATCCGGGAACCGAT
GGCTCATCGCCAAGATGTTTGGCGTTCTAATGTGGCCAAGCGAAAGACAC
TCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGACGTTTGTGATCAAA
CAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCGTTGCAAGCGCTTAC
TCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGCGGACCAGGAAGGAG
AGCATAATGACAATATGACCGGCCCGTCCATCCAAGATCGTACCGGCGAG
TTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATGGCCGCCAACAAAGC
CAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCAGCGGAAACAAGCAA
ACGGTTCCGCAGACGGGCAGGGTGGCAAACGACGATCGGAGTTTGCCCGG
AGAGCTGTGGAAATTGGACGAGGCATCACGGCGACGACTGCGAAGCTGCA
GAGACTGGCCGAGTATCTTCTTCCTACTCTGGGTGTTGATATCGGGATAG
GTGGTTGTCATGCTACAAGGAAAATTGGCAGATGTGGGAGCCAACTTCAA
AGACGTCCTTGAAGTGCGCACAAAGAACATCCAGGCCTCGCGATCCAGAA
CCGAGAACTTTGTCTCCTCAGTATCCTCAAAGACACATTCTGCCCTCGAT
ACGCAGCGCTCCGATTCCCCACTTTACAACACATCTGGACGGCGGACGCC
CCAGCCGGGCGGCGCTTCCGATCTACTGACTCTGGAACCCTCGAACCCGT
CTCCACTCGGCCGCCCCTCCATGCACTCAGATCAGCAACTACTGGTCATG
GAGGAAGCCCAGACGAGCAACGCCTATATCCAAGGGCGTGGTGAGGCAAT
TGATGCGATTGAACGCACCATCAGCGAGCTGGGTGGTATCTTCGGCCAGC
TTGCGCAGATGGTCAGCGAGCAGTCCGACATGATCCAGCGGATAGATGCC
AACACGGAAGACGTGGTGGATAACGTGCAGGGAGCGCATCGCGAGTTACT
GAAGTACTGGACGCGGGTATCCGGGAACCGATGGCTCATCGCCAAGATGT
TTGGCGTTCTAATGTGGCCAAGCGAAAGACACTCTTTGACGACAGACCGG
TTGAGATTTCCGAGTTGACGTTTGTGATCAAACAAGATCTCGCCTCGTTG
AATCAGCAAATCGCCTCGTTGCAAGCGCTTACTCTTTCACAACATCCTAA
GAGCAATCGGTCGAAGGCGGACCAGGAAGGAGAGCATAATGACAATATGA
CCGGCCCGTCCATCCAAGATCGTACCGGCGAGTTCCACGCCATTCTGGGT
CAAGCCCAGAAGCGCATGGCCGCCAACAAAGCCAGTTCACAGCGCCAGGC
TCTTTTGACAGATGCGCAGCGGAAACAAGCAAACGGTTCCGCAGACGGGC
AGGGTGGCAAACGACGATCGGAGTTTGCCCGGAGAGCTGTGGAAATTGGA
CGAGGCATCACGGCGACGACTGCGAAGCTGCAGAGACTGGCCGAGTATCT
TCTTCCTACTCTGGGTGTTGATATCGGGATAGGTGGTTGTCATGCTACAA
GGAAAATTGGCAGATGTGGGAGCCAACTTCAAAGACGTCCTTGAAGTGCG
CACAAAGAACATCCAGGCCTCGCGATCCAGAACCGAGAACTTTGTCTCCT
CAGTATCCTCAAAGACACATTCTGCCCTCGATACGCAGCGCTCCGATTCC
CCACTTTACAACACATCTGGACGGCGGACGCCCCAGCCGGGCGGCGCTTC
CGATCTACTGACTCTGGAACCCTCGAACCCGTCTCCACTCGGCCGCCCCT
CCATGCACTCAGATCAGCAACTACTGGTCATGGAGGAAGCCCAGACGAGC
AACGCCTATATCCAAGGGCGTGGTGAGGCAATTGATGCGATTGAACGCAC
CATCAGCGAGCTGGGTGGTATCTTCGGCCAGCTTGCGCAGATGGTCAGCG
AGCAGTCCGACATGATCCAGCGGATAGATGCCAACACGGAAGACGTGGTG
GATAACGTGCAGGGAGCGCATCGCGAGTTACTGAAGTACTGGACGCGGGT
ATCCGGGAACCGATGGCTCATCGCCAAGATGTTTGGCGTTCTAATGTGGC
CAAGCGAAAGACACTCTTTGACGACAGACCGGTTGAGATTTCCGAGTTGA
CGTTTGTGATCAAACAAGATCTCGCCTCGTTGAATCAGCAAATCGCCTCG
TTGCAAGCGCTTACTCTTTCACAACATCCTAAGAGCAATCGGTCGAAGGC
GGACCAGGAAGGAGAGCATAATGACAATATGACCGGCCCGTCCATCCAAG
ATCGTACCGGCGAGTTCCACGCCATTCTGGGTCAAGCCCAGAAGCGCATG
GCCGCCAACAAAGCCAGTTCACAGCGCCAGGCTCTTTTGACAGATGCGCA
GCGGAAACAAGCAAACGGTTCCGCAGACGGGCAGGGTGGCAAACGACGAT
CGGAGTTTGCCCGGAGAGCTGTGGAAATTGGACGAGGCATCACGGCGACG
ACTGCGAAGCTGCAGAGACTGGCCGAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005547KJC3_005547Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005547-T1KJC3_005547-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005547-T1.cdsKJC3_005547-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005547-T1.utr3p1KJC3_005547-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005547-T1.exon4KJC3_005547-T1.exon4Aspergillus niger KJC3exon
KJC3_005547-T1.exon3KJC3_005547-T1.exon3Aspergillus niger KJC3exon
KJC3_005547-T1.exon2KJC3_005547-T1.exon2Aspergillus niger KJC3exon
KJC3_005547-T1.exon1KJC3_005547-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005547-T1.utr5p1KJC3_005547-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263J3H
DBxrefInterPro:IPR010989
DBxrefInterPro:IPR021538
DBxrefInterPro:IPR000727
DBxrefPFAM:PF11416
DBxrefPFAM:PF05739
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3037312..3039300 -
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