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KJC3_005549-T1, KJC3_005549-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005549-T1
Unique NameKJC3_005549-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3045492..3047542-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005549-T1 ID=KJC3_005549-T1|Name=KJC3_005549-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2051bp|location=Sequence derived from alignment at ch4:3045492..3047542- (Aspergillus niger KJC3)
ATGGGTCAGAACTTGGCTTCAACTATGTCACAATCCCAGGAATTGTACCA
TAAACTAGACCCTACAGTGAAACAAATCCGTCTCGTTACTATCAGACCTG
GTGGATGGACAGATGACATACAGTGCACACTTCGACAATCATCACTAGCC
AAATCAGGGCCCTATGAAACTCTATCCTATGTCTGGGGAGATGTTACAAA
TACAAAGGATATTATAGTGAATGGAATGACCTTCAACGCCACGGTGAACC
TCGAATCAGCACTCCGTCATCTACGCCGTGACACTCCACGGACTATGTGG
ATTGATGCGATATGCATCAATCAGCTAGACCTGGAAGAGCGCGCTTCACA
AGTGGGCTTTATGCGTGATATCTATCAGGGAAGTACCTTGACCATTATAT
GGCTCGGTGATGGGGACGAACGTGCCGAGTCACTATTTGATCTCGCTCGA
AAGTTTCACGATGAAAGCTACACAGGTTCGCTTGCACAAGAGAATGTGGT
GCGCCTGAGAGTATTTATTCACAACGAAGATCGATCGCACAGCTTGGAAT
TCCTGGCCACAGACATATTGAGACGACCCTGGTGGACCAGAGCATGGGTG
CTTCAAGAGGCCGTGGTATCTGCGGAACTACTAGTGAAATGTGGAAATCA
CGAAATTGCGTGGGAGTCCTTGTGGTGGCTTACCATTACTGAATACAAGG
GCACACACCTTCGATTTCCTGTCCGAGTCTCGGCCGGGGAGCTTGAAAAA
CTGCTGAAGATCCAGATAATGAGGGATGCGACCAACAGAGGCCATGAGAT
ATCACTTACGCAACTCGTTGCTTGGAATAGACGGCAGCAGTCAACGGATC
CCAGGGACAAGATATTCAGCCTCCTCGGCTTGGTACGTGGCTTTCCGGAA
TACGCTATACATCCTGACTATTCCGCAAATAACACACTACTGGTTGTGTG
TCTTTGCCTTGTAGAGCAGTCTATCAGGAATGGTAGCCTGGACGTTATAT
CCTTAAGCCAAGGAAGTGAGAAACCCCAGTGGCCATCTTGGGTACCTGAC
TGGGATGTTTACTCGAGCGAAAGATCCAAGACTGCGAACCCCTTGGTTTG
CTTATATGCAGGTGGGGAGCAATTAGAGGCAAGAGACCTTTCGTCTAGTT
TCGCATCCGACTATGACGCATCCCGGTCACTGTCGCCTCGATTCAGATTT
CATTCCAACCCACCGGCCTTAAGCGTTGTGGGCACTTCGGTTGACACCAT
TGATTGCCTAGCGGCAACATACCAGCCCGAGAAACACGAGCAATGGGCAT
CATCGGGATCTGATCCGTGGGTGACCCTCTTAACGTCTTATTTTGAGGGC
GCATCTCATATTTCGGAACTGTCAAGCTGGAGATATGCGGCACACAAATT
TCGATATTCCGTGCCGATGAAGGGATTTGGGTCGAATATGTATACGGAAA
TGAAGGCTTATGTGTCGATGGCCATCAAAGTAATGAGAAAGGCGAGGGAG
TTGAGAGATGGCTGTGACTACGTGGGCGGGGGCTCGTTGGCCGATGCATA
CTTTCGAACACTGATGGCAGATACAATAGCCATTGGCTACAGAAAATCAG
ATCCCCTTGAGCCCCTTTATCTCGACGAACTTGTCAAAGGCGTGTCTGCA
TCACGTTATAAAACCTCTGAAGAAGCTGATACTGGCGATGTCCTTGGCGA
GCATTTCTTAGAGATGTACTGCACTTACGCGTCAATATTTGATTCGACTA
TTACCAGGGCAACCTCATACCGTCGACTGATGGTCTCTTCAAAGGGTTAC
ATAGGCCTTGTACCATCAGGGACTCAGGAAGGAGACCTCATATGTGTTCT
TTATGGTTGCTCTGTTCCTGTAATCCTACGCAAGCAAGGGGATAACTATA
TCTTCGTTGGTGAGAGTTATGTGCATGGCATCATGGACGGGGAAGCTATC
GAGCAGATGAATAAGGGATTATTGGTCGAAGAGGAGTTTACTTTAGTGTA
AGTCAATGGTATGTGTTCAATCTGCTGCAACGTCTATTAGCTGGTTAGGT
G
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Coding sequence (CDS) from alignment at ch4:3045492..3047542-

>KJC3_005549-T1 ID=KJC3_005549-T1|Name=KJC3_005549-T1|organism=Aspergillus niger KJC3|type=CDS|length=2001bp|location=Sequence derived from alignment at ch4:3045492..3047542- (Aspergillus niger KJC3)
ATGGGTCAGAACTTGGCTTCAACTATGTCACAATCCCAGGAATTGTACCA
TAAACTAGACCCTACAGTGAAACAAATCCGTCTCGTTACTATCAGACCTG
GTGGATGGACAGATGACATACAGTGCACACTTCGACAATCATCACTAGCC
AAATCAGGGCCCTATGAAACTCTATCCTATGTCTGGGGAGATGTTACAAA
TACAAAGGATATTATAGTGAATGGAATGACCTTCAACGCCACGGTGAACC
TCGAATCAGCACTCCGTCATCTACGCCGTGACACTCCACGGACTATGTGG
ATTGATGCGATATGCATCAATCAGCTAGACCTGGAAGAGCGCGCTTCACA
AGTGGGCTTTATGCGTGATATCTATCAGGGAAGTACCTTGACCATTATAT
GGCTCGGTGATGGGGACGAACGTGCCGAGTCACTATTTGATCTCGCTCGA
AAGTTTCACGATGAAAGCTACACAGGTTCGCTTGCACAAGAGAATGTGGT
GCGCCTGAGAGTATTTATTCACAACGAAGATCGATCGCACAGCTTGGAAT
TCCTGGCCACAGACATATTGAGACGACCCTGGTGGACCAGAGCATGGGTG
CTTCAAGAGGCCGTGGTATCTGCGGAACTACTAGTGAAATGTGGAAATCA
CGAAATTGCGTGGGAGTCCTTGTGGTGGCTTACCATTACTGAATACAAGG
GCACACACCTTCGATTTCCTGTCCGAGTCTCGGCCGGGGAGCTTGAAAAA
CTGCTGAAGATCCAGATAATGAGGGATGCGACCAACAGAGGCCATGAGAT
ATCACTTACGCAACTCGTTGCTTGGAATAGACGGCAGCAGTCAACGGATC
CCAGGGACAAGATATTCAGCCTCCTCGGCTTGGTACGTGGCTTTCCGGAA
TACGCTATACATCCTGACTATTCCGCAAATAACACACTACTGGTTGTGTG
TCTTTGCCTTGTAGAGCAGTCTATCAGGAATGGTAGCCTGGACGTTATAT
CCTTAAGCCAAGGAAGTGAGAAACCCCAGTGGCCATCTTGGGTACCTGAC
TGGGATGTTTACTCGAGCGAAAGATCCAAGACTGCGAACCCCTTGGTTTG
CTTATATGCAGGTGGGGAGCAATTAGAGGCAAGAGACCTTTCGTCTAGTT
TCGCATCCGACTATGACGCATCCCGGTCACTGTCGCCTCGATTCAGATTT
CATTCCAACCCACCGGCCTTAAGCGTTGTGGGCACTTCGGTTGACACCAT
TGATTGCCTAGCGGCAACATACCAGCCCGAGAAACACGAGCAATGGGCAT
CATCGGGATCTGATCCGTGGGTGACCCTCTTAACGTCTTATTTTGAGGGC
GCATCTCATATTTCGGAACTGTCAAGCTGGAGATATGCGGCACACAAATT
TCGATATTCCGTGCCGATGAAGGGATTTGGGTCGAATATGTATACGGAAA
TGAAGGCTTATGTGTCGATGGCCATCAAAGTAATGAGAAAGGCGAGGGAG
TTGAGAGATGGCTGTGACTACGTGGGCGGGGGCTCGTTGGCCGATGCATA
CTTTCGAACACTGATGGCAGATACAATAGCCATTGGCTACAGAAAATCAG
ATCCCCTTGAGCCCCTTTATCTCGACGAACTTGTCAAAGGCGTGTCTGCA
TCACGTTATAAAACCTCTGAAGAAGCTGATACTGGCGATGTCCTTGGCGA
GCATTTCTTAGAGATGTACTGCACTTACGCGTCAATATTTGATTCGACTA
TTACCAGGGCAACCTCATACCGTCGACTGATGGTCTCTTCAAAGGGTTAC
ATAGGCCTTGTACCATCAGGGACTCAGGAAGGAGACCTCATATGTGTTCT
TTATGGTTGCTCTGTTCCTGTAATCCTACGCAAGCAAGGGGATAACTATA
TCTTCGTTGGTGAGAGTTATGTGCATGGCATCATGGACGGGGAAGCTATC
GAGCAGATGAATAAGGGATTATTGGTCGAAGAGGAGTTTACTTTAGTGTA
A
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005549KJC3_005549Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005549-T1.cdsKJC3_005549-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005549-T1.utr3p1KJC3_005549-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005549-T1.exon1KJC3_005549-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005549-T1KJC3_005549-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010730
DBxrefPFAM:PF06985
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3045492..3047542 -
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