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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3064550..3066375+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005556-T1 ID=KJC3_005556-T1|Name=KJC3_005556-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1826bp|location=Sequence derived from alignment at ch4:3064550..3066375+ (Aspergillus niger KJC3)
TGACAAATTCCTCTCTTAGCTTATATACTATCGACTACGTTACTACAATC
CCTTAAGCTATATCATATTTTCCCCCCGATTGGGTTAGTTGACGCCTTCG
GGCACGTCCGAAATTAACGACTCGTCATATTCAGCCCAATTTTCATGACT
CACGCCCTTCAATTAAGGTAACCCGTCAAAGTTGTCATTTTAGAGACTGT
TGACACGGACATTTTCCATCTCTCGCGTGGTGATTTCCTTCCATTCTTCC
ATTGCATTATCAGAATTTCTCCGTCTGGCATCTCTTCCCCCCTGCCACTA
CCACTCACCATTCCTCCTGAGTACTAGTTACTTCTCCCTATTTACGGGTC
TATATCCACTTCCAGTCGATCAAACAGCCAGCCACCTGCCTGGCACACAT
GCCAGCTGCACTCCCCCCTCCCTCCACACCACTTACAAGGATGTCAACTG
CAACCCGGAATTGTGCCCAGGACGAGGCGGATCCCATCATCCATCAGGCC
TGTCGCATCGACGAAACATCACCACATTCTGAATGGACCCAGACCCAGCT
GCTTCCATTGCTCCGGTCCCATCTCCCTCACTCGCTGCCCCTGCTCCGCC
GTATCCAGCATGAGATCGCCCATCCGTCCCCCACTGCAGTTATCCTAACC
ACATTCCCGGGTCCAGCTCCTGCTCCTCCCGCCTCGTCCTCAGCCTCGCC
GCCAGTCTCACCCTCAGCCTCAGGGGAAGGCCGACTTCCTGTTCCAGAAC
TAGTCTCTAATCCTGGTCTAGTCCCAGTTCCAGGTCCCCGGGTCCCCGAC
ACTTCTCCTCCTCTGGCACCCGACACCGCGGTCCCTGCAGCTGCTTCGGA
TCCTGAATCCTTCTTCCTCCTCCTCCCCTGGATGATCGCCTACGTTGACC
TGAGCGCTGGCCGCGAGAATCAAGTCATAGTGTACTCGAGTCTCGAGCGC
ACCGCCTCTATTCCCTGCACTAGCACCTCCCCAGAACCATCATCATCATC
ATCCCCAGAAGACACTCCCGGTAGCTATAGCAATAGCAATAGTAACACAA
TCCCAATAACCACCATTTCACCCCAACACCACCCCATCCTACGCACCCAA
CTCCTGTTCCTCCTCCACCACATCAAACAACACCTCCTCCCACCCTACCT
CACCACTCTATCCCAACTCCCTTCAACCCAAACCCAACCCCAAGACCATC
AACTCCCCCCTCCTCCCCCGACCGCCTTCTTATTCGGAAACCTGCACACG
GGCCTCTTCTCCACCCTCCTTAACAGCAACACATCCTACTCTCTGGCGCA
GCCAACTTCCCCTGCGGATTTCATCCCGGGAATCAAAGTCCACCGCTTCA
GCCAACCCCCTTACGTCAAGTACCTCCTCCCTCGGGAAGTTATCTGCCAT
CAACCTCGAGACAAGGAGGAGGGGAACTTGCCGCCAGGCTTTCACTTCAG
CGATGGCTGCATCCCAAGAGAGAAACTGGGACTTGTGCGGTCGAGAACAG
TTATTCCTAGATCGGAGGAGACGTTGGCGAAGCTGAGGAGCTGTGCGGTC
TATCGCGATGGGAGTGAGGAGCCGGTTGCGTGGGCGTTCCTCGGTACGGA
TGGGACCTTGGCGACGTTGCATGTGGAAGAGGAGGTTAGGGGGTTGGGGT
TGGCTGGGGTGGTGGGGAGGGAGGTGATGAGGAGGGGCATTGAGGAGGAT
ATGAGCCTGAATGATGGGTGGATGCACTCGAATGCGGCGGAGGATAATTT
GGCCAGTAGGAGGGTTATGGAGAAGTTGGGGGGGAGGGTGGGGTGGATGG
TTTGTTGGTGTGTTTTGGAGGTGTAG back to topCoding sequence (CDS) from alignment at ch4:3064550..3066375+ >KJC3_005556-T1 ID=KJC3_005556-T1|Name=KJC3_005556-T1|organism=Aspergillus niger KJC3|type=CDS|length=1428bp|location=Sequence derived from alignment at ch4:3064550..3066375+ (Aspergillus niger KJC3)
ATGCCAGCTGCACTCCCCCCTCCCTCCACACCACTTACAAGGATGTCAAC
TGCAACCCGGAATTGTGCCCAGGACGAGGCGGATCCCATCATCCATCAGG
CCTGTCGCATCGACGAAACATCACCACATTCTGAATGGACCCAGACCCAG
CTGCTTCCATTGCTCCGGTCCCATCTCCCTCACTCGCTGCCCCTGCTCCG
CCGTATCCAGCATGAGATCGCCCATCCGTCCCCCACTGCAGTTATCCTAA
CCACATTCCCGGGTCCAGCTCCTGCTCCTCCCGCCTCGTCCTCAGCCTCG
CCGCCAGTCTCACCCTCAGCCTCAGGGGAAGGCCGACTTCCTGTTCCAGA
ACTAGTCTCTAATCCTGGTCTAGTCCCAGTTCCAGGTCCCCGGGTCCCCG
ACACTTCTCCTCCTCTGGCACCCGACACCGCGGTCCCTGCAGCTGCTTCG
GATCCTGAATCCTTCTTCCTCCTCCTCCCCTGGATGATCGCCTACGTTGA
CCTGAGCGCTGGCCGCGAGAATCAAGTCATAGTGTACTCGAGTCTCGAGC
GCACCGCCTCTATTCCCTGCACTAGCACCTCCCCAGAACCATCATCATCA
TCATCCCCAGAAGACACTCCCGGTAGCTATAGCAATAGCAATAGTAACAC
AATCCCAATAACCACCATTTCACCCCAACACCACCCCATCCTACGCACCC
AACTCCTGTTCCTCCTCCACCACATCAAACAACACCTCCTCCCACCCTAC
CTCACCACTCTATCCCAACTCCCTTCAACCCAAACCCAACCCCAAGACCA
TCAACTCCCCCCTCCTCCCCCGACCGCCTTCTTATTCGGAAACCTGCACA
CGGGCCTCTTCTCCACCCTCCTTAACAGCAACACATCCTACTCTCTGGCG
CAGCCAACTTCCCCTGCGGATTTCATCCCGGGAATCAAAGTCCACCGCTT
CAGCCAACCCCCTTACGTCAAGTACCTCCTCCCTCGGGAAGTTATCTGCC
ATCAACCTCGAGACAAGGAGGAGGGGAACTTGCCGCCAGGCTTTCACTTC
AGCGATGGCTGCATCCCAAGAGAGAAACTGGGACTTGTGCGGTCGAGAAC
AGTTATTCCTAGATCGGAGGAGACGTTGGCGAAGCTGAGGAGCTGTGCGG
TCTATCGCGATGGGAGTGAGGAGCCGGTTGCGTGGGCGTTCCTCGGTACG
GATGGGACCTTGGCGACGTTGCATGTGGAAGAGGAGGTTAGGGGGTTGGG
GTTGGCTGGGGTGGTGGGGAGGGAGGTGATGAGGAGGGGCATTGAGGAGG
ATATGAGCCTGAATGATGGGTGGATGCACTCGAATGCGGCGGAGGATAAT
TTGGCCAGTAGGAGGGTTATGGAGAAGTTGGGGGGGAGGGTGGGGTGGAT
GGTTTGTTGGTGTGTTTTGGAGGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005556-T1.utr5p1 | KJC3_005556-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016181 |
| DBxref | InterPro:IPR013653 |
| DBxref | PFAM:PF08445 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3064550..3066375 + |
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