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KJC3_005576-T1, KJC3_005576-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005576-T1
Unique NameKJC3_005576-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3131658..3134046+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005576-T1 ID=KJC3_005576-T1|Name=KJC3_005576-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2389bp|location=Sequence derived from alignment at ch4:3131658..3134046+ (Aspergillus niger KJC3)
TTAGCCGTGATATGGCTCATGCAGGATTGTCCATGCTCCATTAGATAAGT
CTGATGCATGAATGAGGGATTAAACACGACTAGGACGAATGCAGCGCCTT
CGTGATAGCGCATCGAGATATCGGCCCCCGTGGCTGTCCGCGGAGCACCA
CCACGTCAAACAACTCACTAACTGACTCTGGAAGATACCCCCGACCAAAA
TGAAGTCAACATCATCCCAATAATGCATCTAACCCCAGAGCAAGTTCTCT
CCACCAACTGCAGTGCAAGTGAATCCGATCCTCCAACCCGACAGGTGGAA
CGCAATTCTCCGGCGCCTCCACATTTCTCCGGCCTCCGTCTGGGGAAGAA
GCAAGCCATGCATCACCGTATGATGCCATGATAGAATGTCAGTCTGGGGT
AACTGACATTATGCAGAAGCTTGACCATCCCCGCATCCCCGGATTGCGTT
GATCATCATATAAAATGGCCACAAAAATGAACAGGGTCAACCACCAACCA
GCCAATTCCACCTCCATCCCACACAATGCTCCTCCACGGCCTTCTGCTGG
CCCTCCAGGCCATTCTAGCCTCCTCAGCAGCCATAACCTCCCCATCTTCA
AACCATCTCTCAACGGCAGCTCGCGAGAAATGCCAAACAACCCTCCAATG
CCCCCCAGGCACCCTCATCGTCTCCAACACCCACCCCCAACTCTCCAACT
TCACCACCCTCCAAGCAGCCATCAATGCCCTCCCCAACGACAACTCCTCC
CAAACCATCCTCCTCCTCTCCGGCTCCTACAATGAACAAGTCAACATCAC
CCGCTCCGGCCCCATCACCCTCCTGGGCCAGCAGCCAGACCGCGCAGCCC
TAACCGACCCTGCCCGCAACACCGTCAACCTCACCTTCGCCGGCGCCAAC
AGCGACAGCACCGGCGACATCGACAACGTCTGGTTCAGCGTCATGGTCGT
AGCTCCGACCCTGGACGCGAGTCTCACCGGCTCCGGCACAACAGGATATC
CAGTGCCAGCGGACACCCCGTTCGGGAACACTGATTTCCGCGTGTACAAT
ATCGACTTCCGCAATACCTATGCGCCGTACTCTGCTGGTCCGGCGCATGC
CATTAGTTTTAGTCGCTCCAATGGAGGGTTTTACTACTGCGGGTTCTACT
CTTACCAGGATACTGTACTTCCCCCTCCCTCCCCCTCAACCCTATCCCCC
CCAACCACAATACTAACAAGTAAACCCAGATCTACATCGGCAAACTCGGC
TCCGCATACATGTACAAATCCATTCTCGCGGGCCAAACCGACTTCCTATA
CGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCGTCCTCCGCTCAT
GCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACAACAGTCCGGAAC
AACTACGGCGTATACATCCACGACTCGACCGTAAACGCAGCGAACACCTC
CATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCAGACCGTGGAACT
CACTGCACCGATCCATCTTCGCGAACACATACGAAGACGGGAGCATCGAG
CCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAAAAACGAGACGCT
GATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACCTCACAGGGAGGA
GAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAGGAGGAGAGGTAT
CGGGATCCGAGCAGGGTGTTTTTGTTCGAGGATGGAAGGGAGGGCAATGT
GGCGTGGATAGATTGGGATGTGGTCTCCTCTTGATAATCTCAGTCTTCTT
CCCTTGATCAGTAGTATGTACATAAAACACACAAGTCAATCAATCACCCC
TTCTGAACAAGATCATCCAGTTTCCCGGAAATGGCTAAATACGCCGCTCC
CGTATCAGCCCAAACCCTATACTCCTGTACTTTCCACTCTCCATCAGAGT
CTTCTTCTTCTCCTCCATCTTGTGCAATCGCCAATCTATACACAAATCCC
TCGTCCCAGCCCATCTCTGTGCGTTTGGCAATGAATCTCGCCCACCCTCG
TACACAAACACATCCTTTCTCCTCGTCGATCACCCAATCCTGCTCATCCT
CGAATCTCATCCCCTCGTAGCGTAGCGCAGAGCCCATCGTCTCGAAGTAG
CGTTTCACTCCGTCTTGGCCGGTGAAGTCGCGGCCTAGGAAGGGGGCGAG
TTGGGGGAGGCCGGCTTCGTGGATTAGAGGGGGTGTGGAGGGGGAGGAGG
TGAATTGGGCGAGGATCGTGGATAACGGGGGAGGGGGGGATTGGGTGAGG
GTGGTGAGGAAGGTGTGTGTTGTTTGTTTGAGGGTTCTCTTGTCTGGCGG
CATTTTGGCGGTGATAGTTGAGTGGTGTTTACTTAGTTG
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Coding sequence (CDS) from alignment at ch4:3131658..3134046+

>KJC3_005576-T1 ID=KJC3_005576-T1|Name=KJC3_005576-T1|organism=Aspergillus niger KJC3|type=CDS|length=2388bp|location=Sequence derived from alignment at ch4:3131658..3134046+ (Aspergillus niger KJC3)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTATCTACATCGG
CAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCAAACCG
ACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCGTC
CTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACAAC
AGTCCGGAACAACTACGGCGTATACATCCACGACTCGACCGTAAACGCAG
CGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCAGA
CCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACATACGAAGACGG
GAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAAAA
ACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACCTC
ACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAGGA
GGAGAGGTATCGGGATCCGAGCAGGGTGTTTTTGTTCGAGGATGGAAGGG
AGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGAATGCTC
CTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTCAGCAGC
CATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCGAGAAAT
GCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCCAACACC
CACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAATGCCCT
CCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCTCCTACA
ATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTGGGCCAG
CAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGTCAACCT
CACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACAACGTCT
GGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTCACCGGC
TCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGGGAACAC
TGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGCCGTACT
CTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGAGGGTTT
TACTACTGCGGGTTCTACTCTTACCAGGATACTATCTACATCGGCAAACT
CGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCAAACCGACTTCC
TATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGATCGTCCTCCGC
TCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAACACAACAGTCCG
GAACAACTACGGCGTATACATCCACGACTCGACCGTAAACGCAGCGAACA
CCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAGGCAGACCGTGG
AACTCACTGCACCGATCCATCTTCGCGAACACATACGAAGACGGGAGCAT
CGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAGTAAAAACGAGA
CGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCAACCTCACAGGG
AGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGCGAGGAGGAGAG
GTATCGGGATCCGAGCAGGGTGTTTTTGTTCGAGGATGGAAGGGAGGGCA
ATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005576KJC3_005576Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005576-T1.utr5p1KJC3_005576-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005576-T1.exon1KJC3_005576-T1.exon1Aspergillus niger KJC3exon
KJC3_005576-T1.exon2KJC3_005576-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005576-T1.cdsKJC3_005576-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005576-T1.utr3p1KJC3_005576-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005576-T1KJC3_005576-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:CE8
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000070
DBxrefPFAM:PF01095
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3131658..3134046 +
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