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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3139269..3141444+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005581-T1 ID=KJC3_005581-T1|Name=KJC3_005581-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2176bp|location=Sequence derived from alignment at ch4:3139269..3141444+ (Aspergillus niger KJC3)
TTCACTTCCATTCTTCTCATTCGGCCCGCTCAACCATGACGCCGTCCGCC
AGGGTCCTCTTCCTTGAATACCAGAAAGGCTGATCGCTTTGCATCTTTTG
GTCTCGTCCGCAGACCTGGTGCTGTACAATGGCTCCACGAGCCTCAGCTC
TCTCCCGGTTTCCGCTCGCGAAGTCGATCGCCAAGTGCTTCCCCGGCCAC
CTCAAGCGGAGAACCAACAGGAAACCGGAGATTGTCAGTGAGGAGCTATG
TAGTGAGTGAGGCTGTGATGTTGTTTCATCTATTTTTCTAACACGCCTTT
GTTTCCGCAGATCATGCTCTGCAGCGCCTGTCACCGTACCTCCTCCGCAA
TCGGCCGTTGGACATCCTCGACCTCTGGCCTGGAGCTGGCCTCTGGTCAT
CCAAGATCAACAACCTTCTCCAACCGCGACGCCATGTCCTCGTTGAACCC
GAGCTGCAGAACTTCCGCCCGCTACTAGACCCGCTGGCCCAAAGCCATCC
GTCCTACAAGCTACTGTCCATGGACGTCTTCTCCATCGGCGACTGGAAAC
CTGTGCTCACGGAGCATTTCCCCGAACAAGGACCGGACAATGGCGATCAT
ACCGGAGTTCTGCCAAAGAACGACACCCTTCTAGTACTCGCGAACCTCCC
CGCCACGACCTCCGACAAAGACCATTTCACCGCAGGCAGATGGTGGCAGA
TGTTCATGGAGACCTGCATGCAGCAGACGGGACTACACTCCTACGGAGCT
ATCCGATTGCTGGCGTCTCTACCATCGACAGAATCACAGGCTATCATTCC
CCGCTACGTGGTCGATCGCCGACGGGTTTCGCTTTGGACGGAGAATGTCG
CGCTACACACCTTTGAAGTCGCCGCTCCTCAAGACGAGAAATTCTGGGTC
AACCACAAAGGGTTCAACGTCGCCATAGACAATGCCGCGCGTGTCGCTGA
AAGGGCTGCCGAAAAGAACATCATCACACCTCCCGGAAGGGAATTTCAAC
CGCTCCTCCCAGCCCCGGAGAGCCCCGACCCCGGCCGGAAACCAGTGCCT
TACACACCGCGCATAAGAACAGCCCTCCACGACAGATTCTGCGAAGACAT
CCAAGCCCTGGACAACATGGACAAGTCCTCCCCAGGCTACGCTGAAGCGA
AGAAGAAGCGCAGTCGCGCGCAGACCCGTCTCAACCGAGACAACCGACAA
GCATACTTCCTCCAGCAAATGGTCGACCAGTCGCGCGAGATCGACGCCCA
ATACGACGCTCTATCACGAGCAGCCGCCGATCCGAACACGACCTCCGCCG
ACTTCAAGCCCATTCTCGACAGAATATCCGCCCTGCGGAGCTCCATCACC
GACGAAGGCCAAGAAAACTACCACGACCACCTCAAACAATTCCCCCACAT
CCACGACAGCCACCGCGCCTCCCTCCGCAGCAACAACAACTTCGACGACG
CTCTCCTAGCCTGGGACCGCCGTCCCTTCGAACCCCTCCTCATCCACCCG
GAAGAACTCTACCCCCAAGGCATCGACCGCAGCATAGTCTATTTCGAACC
GAACCCCAACTCCCCCGTCGTTGGAAAAATCAACGCCCTCGACCCCTCCC
AACGCGGCGACGCCTTCCGCCTCTTCGAAACCCTCTCCCTCTCCCTCGGC
CGTGGTCGCGAAGCCCTCTCCGTAGCTGAAGTCCTCCAGCTCATATTCCC
GGGCCGCTCCACCAACGACATCGTCAAAGCCATCCCCAGTCTCGCCGAAT
ATGCCGCAAAGACACCAAAACCAGACTTTGACAGTCTCCCGAAGACCATC
CACGGGGGCGAAGACCCGGTGACGAGTTTCCAGGAGAACCTGGACTACGA
CCTGAGTGACGTGCGCGTGCATATTCTCTCGACATGGACGATCTGGGATA
TTTGCATCGAGTATCAGCGCAGCGGGGTCTCGGTGTCGAGTGTGCAATTG
AATCGGTTGTTTGGGGGGACGTTGACGTCGTATAAAACGGGGGTGCATCG
CGAGATGGTGAAGAAGAGACTCCACTGATGAGAGTATCTTGAAATGGATG
TATTTGTATTTTGGTTATGAGATATGTATAACTAGTATGTACTGTACTAT
ATGATAGATGATAGACTCTCCTCAAAATGATAGAATAGATGCTAGGGATG
AAACTGTATGTGAGCCAGTAGCATGA back to topCoding sequence (CDS) from alignment at ch4:3139269..3141444+ >KJC3_005581-T1 ID=KJC3_005581-T1|Name=KJC3_005581-T1|organism=Aspergillus niger KJC3|type=CDS|length=3684bp|location=Sequence derived from alignment at ch4:3139269..3141444+ (Aspergillus niger KJC3)
ATGGCTCCACGAGCCTCAGCTCTCTCCCGGTTTCCGCTCGCGAAGTCGAT
CGCCAAGTGCTTCCCCGGCCACCTCAAGCGGAGAACCAACAGGAAACCGG
AGATTGTCAGTGAGGAGCTATGTAATCATGCTCTGCAGCGCCTGTCACCG
TACCTCCTCCGCAATCGGCCGTTGGACATCCTCGACCTCTGGCCTGGAGC
TGGCCTCTGGTCATCCAAGATCAACAACCTTCTCCAACCGCGACGCCATG
TCCTCGTTGAACCCGAGCTGCAGAACTTCCGCCCGCTACTAGACCCGCTG
GCCCAAAGCCATCCGTCCTACAAGCTACTGTCCATGGACGTCTTCTCCAT
CGGCGACTGGAAACCTGTGCTCACGGAGCATTTCCCCGAACAAGGACCGG
ACAATGGCGATCATACCGGAGTTCTGCCAAAGAACGACACCCTTCTAGTA
CTCGCGAACCTCCCCGCCACGACCTCCGACAAAGACCATTTCACCGCAGG
CAGATGGTGGCAGATGTTCATGGAGACCTGCATGCAGCAGACGGGACTAC
ACTCCTACGGAGCTATCCGATTGCTGGCGTCTCTACCATCGACAGAATCA
CAGGCTATCATTCCCCGCTACGTGGTCGATCGCCGACGGGTTTCGCTTTG
GACGGAGAATGTCGCGCTACACACCTTTGAAGTCGCCGCTCCTCAAGACG
AGAAATTCTGGGTCAACCACAAAGGGTTCAACGTCGCCATAGACAATGCC
GCGCGTGTCGCTGAAAGGGCTGCCGAAAAGAACATCATCACACCTCCCGG
AAGGGAATTTCAACCGCTCCTCCCAGCCCCGGAGAGCCCCGACCCCGGCC
GGAAACCAGTGCCTTACACACCGCGCATAAGAACAGCCCTCCACGACAGA
TTCTGCGAAGACATCCAAGCCCTGGACAACATGGACAAGTCCTCCCCAGG
CTACGCTGAAGCGAAGAAGAAGCGCAGTCGCGCGCAGACCCGTCTCAACC
GAGACAACCGACAAGCATACTTCCTCCAGCAAATGGTCGACCAGTCGCGC
GAGATCGACGCCCAATACGACGCTCTATCACGAGCAGCCGCCGATCCGAA
CACGACCTCCGCCGACTTCAAGCCCATTCTCGACAGAATATCCGCCCTGC
GGAGCTCCATCACCGACGAAGGCCAAGAAAACTACCACGACCACCTCAAA
CAATTCCCCCACATCCACGACAGCCACCGCGCCTCCCTCCGCAGCAACAA
CAACTTCGACGACGCTCTCCTAGCCTGGGACCGCCGTCCCTTCGAACCCC
TCCTCATCCACCCGGAAGAACTCTACCCCCAAGGCATCGACCGCAGCATA
GTCTATTTCGAACCGAACCCCAACTCCCCCGTCGTTGGAAAAATCAACGC
CCTCGACCCCTCCCAACGCGGCGACGCCTTCCGCCTCTTCGAAACCCTCT
CCCTCTCCCTCGGCCGTGGTCGCGAAGCCCTCTCCGTAGCTGAAGTCCTC
CAGCTCATATTCCCGGGCCGCTCCACCAACGACATCGTCAAAGCCATCCC
CAGTCTCGCCGAATATGCCGCAAAGACACCAAAACCAGACTTTGACAGTC
TCCCGAAGACCATCCACGGGGGCGAAGACCCGGTGACGAGTTTCCAGGAG
AACCTGGACTACGACCTGAGTGACGTGCGCGTGCATATTCTCTCGACATG
GACGATCTGGGATATTTGCATCGAGTATCAGCGCAGCGGGGTCTCGGTGT
CGAGTGTGCAATTGAATCGGTTGTTTGGGGGGACGTTGACGTCGTATAAA
ACGGGGGTGCATCGCGAGATGGTGAAGAAGAGACTCCACTGAATGGCTCC
ACGAGCCTCAGCTCTCTCCCGGTTTCCGCTCGCGAAGTCGATCGCCAAGT
GCTTCCCCGGCCACCTCAAGCGGAGAACCAACAGGAAACCGGAGATTGTC
AGTGAGGAGCTATGTAATCATGCTCTGCAGCGCCTGTCACCGTACCTCCT
CCGCAATCGGCCGTTGGACATCCTCGACCTCTGGCCTGGAGCTGGCCTCT
GGTCATCCAAGATCAACAACCTTCTCCAACCGCGACGCCATGTCCTCGTT
GAACCCGAGCTGCAGAACTTCCGCCCGCTACTAGACCCGCTGGCCCAAAG
CCATCCGTCCTACAAGCTACTGTCCATGGACGTCTTCTCCATCGGCGACT
GGAAACCTGTGCTCACGGAGCATTTCCCCGAACAAGGACCGGACAATGGC
GATCATACCGGAGTTCTGCCAAAGAACGACACCCTTCTAGTACTCGCGAA
CCTCCCCGCCACGACCTCCGACAAAGACCATTTCACCGCAGGCAGATGGT
GGCAGATGTTCATGGAGACCTGCATGCAGCAGACGGGACTACACTCCTAC
GGAGCTATCCGATTGCTGGCGTCTCTACCATCGACAGAATCACAGGCTAT
CATTCCCCGCTACGTGGTCGATCGCCGACGGGTTTCGCTTTGGACGGAGA
ATGTCGCGCTACACACCTTTGAAGTCGCCGCTCCTCAAGACGAGAAATTC
TGGGTCAACCACAAAGGGTTCAACGTCGCCATAGACAATGCCGCGCGTGT
CGCTGAAAGGGCTGCCGAAAAGAACATCATCACACCTCCCGGAAGGGAAT
TTCAACCGCTCCTCCCAGCCCCGGAGAGCCCCGACCCCGGCCGGAAACCA
GTGCCTTACACACCGCGCATAAGAACAGCCCTCCACGACAGATTCTGCGA
AGACATCCAAGCCCTGGACAACATGGACAAGTCCTCCCCAGGCTACGCTG
AAGCGAAGAAGAAGCGCAGTCGCGCGCAGACCCGTCTCAACCGAGACAAC
CGACAAGCATACTTCCTCCAGCAAATGGTCGACCAGTCGCGCGAGATCGA
CGCCCAATACGACGCTCTATCACGAGCAGCCGCCGATCCGAACACGACCT
CCGCCGACTTCAAGCCCATTCTCGACAGAATATCCGCCCTGCGGAGCTCC
ATCACCGACGAAGGCCAAGAAAACTACCACGACCACCTCAAACAATTCCC
CCACATCCACGACAGCCACCGCGCCTCCCTCCGCAGCAACAACAACTTCG
ACGACGCTCTCCTAGCCTGGGACCGCCGTCCCTTCGAACCCCTCCTCATC
CACCCGGAAGAACTCTACCCCCAAGGCATCGACCGCAGCATAGTCTATTT
CGAACCGAACCCCAACTCCCCCGTCGTTGGAAAAATCAACGCCCTCGACC
CCTCCCAACGCGGCGACGCCTTCCGCCTCTTCGAAACCCTCTCCCTCTCC
CTCGGCCGTGGTCGCGAAGCCCTCTCCGTAGCTGAAGTCCTCCAGCTCAT
ATTCCCGGGCCGCTCCACCAACGACATCGTCAAAGCCATCCCCAGTCTCG
CCGAATATGCCGCAAAGACACCAAAACCAGACTTTGACAGTCTCCCGAAG
ACCATCCACGGGGGCGAAGACCCGGTGACGAGTTTCCAGGAGAACCTGGA
CTACGACCTGAGTGACGTGCGCGTGCATATTCTCTCGACATGGACGATCT
GGGATATTTGCATCGAGTATCAGCGCAGCGGGGTCTCGGTGTCGAGTGTG
CAATTGAATCGGTTGTTTGGGGGGACGTTGACGTCGTATAAAACGGGGGT
GCATCGCGAGATGGTGAAGAAGAGACTCCACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005581-T1.utr5p1 | KJC3_005581-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005581-T1.utr3p1 | KJC3_005581-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3139269..3141444 + |
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