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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3150330..3151854- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005586-T1 ID=KJC3_005586-T1|Name=KJC3_005586-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1525bp|location=Sequence derived from alignment at ch4:3150330..3151854- (Aspergillus niger KJC3)
AAAATATGCCGTTGCTTCCTGCATTCCCAGGCAGTAGACGTCGTCAGTTC
ACCGCAGCAGGATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTG
GCGACGGTCACGGTCGCGTTGCGACTGTATACGCGATTGAAACTGGTGAG
GAAACCGGGATGGGATGATTTGTTGATTGTGTTGTCGTTGGTAGGCAGTA
TACTTTCTGAATAGTTGATATGCAGTGCTGATATGATGTGATGTGTTGAG
CATAGGCGACTGATGTGGTGTTCTTCGCTTTCCTTGTCATAGGTACGACG
ATGCGATGCTTGCATGCTATATCTTGAATGAACGATAAAAACTAACAATG
TATACAATAGAAATCCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGC
TCCGGAGGTGGTGAGGAGGCAATTAAAGGTATACTCCCCCTCTATACTAC
CCTATTTCCATACATGATATAGTTGCTAACCATGAAATGAATTAAATCAA
GGCCCTCTGGATAACAATCCCCCTCTACAACCTGACCCTCACCCTCACCA
AGTTATCCCTAATCTTCCTCTACCGCCGCCTCTTCCCAACCCACACCTAC
CGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACCGGCCTCTG
GATGGTCCTCAGCACCTTGATCTTCTGCATCCCCATAAACGCCTTCTGGG
ATACGTCTATCCCGCATACATGTCTCCCCGAGGATGTAGTATGGTGTCTG
AACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTGCTTCCCTT
GCCCATCCTGGCGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGCGCTGT
TGGTTATTTTTGCATTAGGGTTTTTGTATGTCTCCCTTACTCTCTTATCT
TATACAACCCCAACCCACCCCCCCCCCTCCTCTTTCTTCCGTCGGTATAG
GAAAGAACTAATGATGGTAATGGTTACAGTGTCTGCGCAACAAGCATCGT
CCGTCTATCAACCATCGTCCATCTCCTCCGAGACCCAGACTTCACCTGTA
TACTCCCTCCCGTACCCTATCCTACCCTATACCTCCAATCCATACTAACA
AAATTCAACAGCAGGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAAT
CCAACGTCGCCATAATCTGCGCATGCCTACCCCCTCTGCGCCCGCTCCTC
GTGCGCATCTTCCCCAAACTAATCCCATCACGAATGCGCTCCTACCAGAG
AGACAAAGACTCCAGATCAAACAGCAATCCCAACAACAACAAAGCAGCAG
AAGCAGCCGCAGGCCAACCACCACCAACGATAAGTAAATCTCGGACTAGG
AAGTCTCTCTCGAAGAGAGGGTCGAGGAATGAGCCGGAACATATCGATTT
TGATTTCTTGAGTGTGTATGGCGCTGGTGGGAATATGTTTGCGCCGGGGA
GTACGGTTTCGACGAGTGTGTGGGGGGATGCGGGGAGTGTTAGGTCGGGG
GTTGAGAATGGGAATAAGGATGGGA back to topCoding sequence (CDS) from alignment at ch4:3150330..3151854- >KJC3_005586-T1 ID=KJC3_005586-T1|Name=KJC3_005586-T1|organism=Aspergillus niger KJC3|type=CDS|length=4830bp|location=Sequence derived from alignment at ch4:3150330..3151854- (Aspergillus niger KJC3)
TGTCTGCGCAACAAGCATCGTCCGTCTATCAACCATCGTCCATCTCCTCC
GAGACCCAGACTTCACCTGTATACTCCCTCCCGTACCCTATCCTACCCTA
TACCTCCAATCCATACTAACAAAATTCAACAGCAGGAAACGGCCTCGCCG
CAACCTGGTCCTTCGTCGAATCCAACGTCGCCATAATCTGCGCATGCCTA
CCCCCTCTGCGCCCGCTCCTCGTGCGCATCTTCCCCAAACTAATCCCATC
ACGAATGCGCTCCTACCAGAGAGACAAAGACTCCAGATCAAACAGCAATC
CCAACAACAACAAAGCAGCAGAAGCAGCCGCAGGCCAACCACCACCAACG
ATAAGTAAGCCCTCTGGATAACAATCCCCCTCTACAACCTGACCCTCACC
CTCACCAAGTTATCCCTAATCTTCCTCTACCGCCGCCTCTTCCCAACCCA
CACCTACCGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACCG
GCCTCTGGATGGTCCTCAGCACCTTGATCTTCTGCATCCCCATAAACGCC
TTCTGGGATACGTCTATCCCGCATACATGTCTCCCCGAGGATGTAGTATG
GTGTCTGAACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTGC
TTCCCTTGCCCATCCTGGCGAATTTAAATCTGCCGAAAAGGCAGAAGGCC
GCGCTGTTGGTTATTTTTGCATTAGGGTTTTTAAATCCAAAACGGCCTCG
CCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGAGGAGGCAATTAAAG
GCGACTGATGTGGTGTTCTTCGCTTTCCTTGTCATAGATGTATGCCCTGC
CCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCACGGTCGCGTTGCGA
CTGTATACGCGATTGAAACTGGTGAGGAAACCGGGATGGGATGATTTGTT
GATTGTGTTGTCGTTGTGTCTGCGCAACAAGCATCGTCCGTCTATCAACC
ATCGTCCATCTCCTCCGAGACCCAGACTTCACCTGTATACTCCCTCCCGT
ACCCTATCCTACCCTATACCTCCAATCCATACTAACAAAATTCAACAGCA
GGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAATCCAACGTCGCCAT
AATCTGCGCATGCCTACCCCCTCTGCGCCCGCTCCTCGTGCGCATCTTCC
CCAAACTAATCCCATCACGAATGCGCTCCTACCAGAGAGACAAAGACTCC
AGATCAAACAGCAATCCCAACAACAACAAAGCAGCAGAAGCAGCCGCAGG
CCAACCACCACCAACGATAAGTAAGCCCTCTGGATAACAATCCCCCTCTA
CAACCTGACCCTCACCCTCACCAAGTTATCCCTAATCTTCCTCTACCGCC
GCCTCTTCCCAACCCACACCTACCGCATCCTCCTCATCCTCACCCTCATC
TTCGTCATCATAACCGGCCTCTGGATGGTCCTCAGCACCTTGATCTTCTG
CATCCCCATAAACGCCTTCTGGGATACGTCTATCCCGCATACATGTCTCC
CCGAGGATGTAGTATGGTGTCTGAACGCCGCGTTCCAGATCACCACTGAT
CTGATACTCGTTGTGCTTCCCTTGCCCATCCTGGCGAATTTAAATCTGCC
GAAAAGGCAGAAGGCCGCGCTGTTGGTTATTTTTGCATTAGGGTTTTTAA
ATCCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGT
GAGGAGGCAATTAAAGGCGACTGATGTGGTGTTCTTCGCTTTCCTTGTCA
TAGATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGT
CACGGTCGCGTTGCGACTGTATACGCGATTGAAACTGGTGAGGAAACCGG
GATGGGATGATTTGTTGATTGTGTTGTCGTTGTGTCTGCGCAACAAGCAT
CGTCCGTCTATCAACCATCGTCCATCTCCTCCGAGACCCAGACTTCACCT
GTATACTCCCTCCCGTACCCTATCCTACCCTATACCTCCAATCCATACTA
ACAAAATTCAACAGCAGGAAACGGCCTCGCCGCAACCTGGTCCTTCGTCG
AATCCAACGTCGCCATAATCTGCGCATGCCTACCCCCTCTGCGCCCGCTC
CTCGTGCGCATCTTCCCCAAACTAATCCCATCACGAATGCGCTCCTACCA
GAGAGACAAAGACTCCAGATCAAACAGCAATCCCAACAACAACAAAGCAG
CAGAAGCAGCCGCAGGCCAACCACCACCAACGATAAGTAAGCCCTCTGGA
TAACAATCCCCCTCTACAACCTGACCCTCACCCTCACCAAGTTATCCCTA
ATCTTCCTCTACCGCCGCCTCTTCCCAACCCACACCTACCGCATCCTCCT
CATCCTCACCCTCATCTTCGTCATCATAACCGGCCTCTGGATGGTCCTCA
GCACCTTGATCTTCTGCATCCCCATAAACGCCTTCTGGGATACGTCTATC
CCGCATACATGTCTCCCCGAGGATGTAGTATGGTGTCTGAACGCCGCGTT
CCAGATCACCACTGATCTGATACTCGTTGTGCTTCCCTTGCCCATCCTGG
CGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGCGCTGTTGGTTATTTTT
GCATTAGGGTTTTTAAATCCAAAACGGCCTCGCCGAAAACGAAGCAGATC
TTGCTCCGGAGGTGGTGAGGAGGCAATTAAAGGCGACTGATGTGGTGTTC
TTCGCTTTCCTTGTCATAGATGTATGCCCTGCCCGTGGGAATCGTTTTCC
TTTGCCTGGCGACGGTCACGGTCGCGTTGCGACTGTATACGCGATTGAAA
CTGGTGAGGAAACCGGGATGGGATGATTTGTTGATTGTGTTGTCGTTGTG
TCTGCGCAACAAGCATCGTCCGTCTATCAACCATCGTCCATCTCCTCCGA
GACCCAGACTTCACCTGTATACTCCCTCCCGTACCCTATCCTACCCTATA
CCTCCAATCCATACTAACAAAATTCAACAGCAGGAAACGGCCTCGCCGCA
ACCTGGTCCTTCGTCGAATCCAACGTCGCCATAATCTGCGCATGCCTACC
CCCTCTGCGCCCGCTCCTCGTGCGCATCTTCCCCAAACTAATCCCATCAC
GAATGCGCTCCTACCAGAGAGACAAAGACTCCAGATCAAACAGCAATCCC
AACAACAACAAAGCAGCAGAAGCAGCCGCAGGCCAACCACCACCAACGAT
AAGTAAGCCCTCTGGATAACAATCCCCCTCTACAACCTGACCCTCACCCT
CACCAAGTTATCCCTAATCTTCCTCTACCGCCGCCTCTTCCCAACCCACA
CCTACCGCATCCTCCTCATCCTCACCCTCATCTTCGTCATCATAACCGGC
CTCTGGATGGTCCTCAGCACCTTGATCTTCTGCATCCCCATAAACGCCTT
CTGGGATACGTCTATCCCGCATACATGTCTCCCCGAGGATGTAGTATGGT
GTCTGAACGCCGCGTTCCAGATCACCACTGATCTGATACTCGTTGTGCTT
CCCTTGCCCATCCTGGCGAATTTAAATCTGCCGAAAAGGCAGAAGGCCGC
GCTGTTGGTTATTTTTGCATTAGGGTTTTTAAATCCAAAACGGCCTCGCC
GAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGAGGAGGCAATTAAAGGC
GACTGATGTGGTGTTCTTCGCTTTCCTTGTCATAGATGTATGCCCTGCCC
GTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCACGGTCGCGTTGCGACT
GTATACGCGATTGAAACTGGTGAGGAAACCGGGATGGGATGATTTGTTGA
TTGTGTTGTCGTTGTGTCTGCGCAACAAGCATCGTCCGTCTATCAACCAT
CGTCCATCTCCTCCGAGACCCAGACTTCACCTGTATACTCCCTCCCGTAC
CCTATCCTACCCTATACCTCCAATCCATACTAACAAAATTCAACAGCAGG
AAACGGCCTCGCCGCAACCTGGTCCTTCGTCGAATCCAACGTCGCCATAA
TCTGCGCATGCCTACCCCCTCTGCGCCCGCTCCTCGTGCGCATCTTCCCC
AAACTAATCCCATCACGAATGCGCTCCTACCAGAGAGACAAAGACTCCAG
ATCAAACAGCAATCCCAACAACAACAAAGCAGCAGAAGCAGCCGCAGGCC
AACCACCACCAACGATAAGTAAGCCCTCTGGATAACAATCCCCCTCTACA
ACCTGACCCTCACCCTCACCAAGTTATCCCTAATCTTCCTCTACCGCCGC
CTCTTCCCAACCCACACCTACCGCATCCTCCTCATCCTCACCCTCATCTT
CGTCATCATAACCGGCCTCTGGATGGTCCTCAGCACCTTGATCTTCTGCA
TCCCCATAAACGCCTTCTGGGATACGTCTATCCCGCATACATGTCTCCCC
GAGGATGTAGTATGGTGTCTGAACGCCGCGTTCCAGATCACCACTGATCT
GATACTCGTTGTGCTTCCCTTGCCCATCCTGGCGAATTTAAATCTGCCGA
AAAGGCAGAAGGCCGCGCTGTTGGTTATTTTTGCATTAGGGTTTTTAAAT
CCAAAACGGCCTCGCCGAAAACGAAGCAGATCTTGCTCCGGAGGTGGTGA
GGAGGCAATTAAAGGCGACTGATGTGGTGTTCTTCGCTTTCCTTGTCATA
GATGTATGCCCTGCCCGTGGGAATCGTTTTCCTTTGCCTGGCGACGGTCA
CGGTCGCGTTGCGACTGTATACGCGATTGAAACTGGTGAGGAAACCGGGA
TGGGATGATTTGTTGATTGTGTTGTCGTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005586-T1.utr3p1 | KJC3_005586-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005586-T1.utr5p1 | KJC3_005586-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:3150330..3151854 - |
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