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KJC3_005590-T1, KJC3_005590-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005590-T1
Unique NameKJC3_005590-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3161691..3164034-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005590-T1 ID=KJC3_005590-T1|Name=KJC3_005590-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2344bp|location=Sequence derived from alignment at ch4:3161691..3164034- (Aspergillus niger KJC3)
ATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCACACTGGTGG
CCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCTTGAACGCCG
CCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTATGCTACTGGT
AACGCTGTAAGTTTAACCATATAATTCGCCCCTGGGGTTGGTTTCGAGAA
GCAGTGAGAGCGGGGTATGCTAACACACCATATAACAGGCCGGACGCTCC
GGTGCCCCCGAAGGCCAGCACCTGACCAAGGTCGACCGCAGCGACGACAT
CGTCAAGCCCAAGACCGTTGGCTACCAGGTGGCCGATGCGATCAAGAAGC
GCCGAAACGAGGACGGCTACAAGATGACTCAGAAGGAACTCGCCACCAAG
TGCAACACCACCATCACTGTTGTTCAGGACTTCGAGCGCGGTACTGCTGC
TCCGGACCAGAAGGTCCTCAGTGCCATGGAGCGCGTGCTGAACGTTAAGC
TGAGGGGTACGGGCATCGGGCAGGAGAAGTTCCCTAAGAAGAAGTAAAAT
GATCGGGGGTGAGCCCGCGGCTTTTTCTTGGGGGAAATGGGGAGTGAAAA
CTGATGATTGATTGAAAATGCTTTTTTTTTCCATCACACCTTTTTACTCT
TTCAACGGCTTTTTCTTATGGTTTTATTTGGTCACGCCCCGGGTTTACTT
ACGACCTCTTTCTTTTTCTTTTTCGAGAGACTTTTTCGGATGTTACGTTA
TGAATGAGATCCCATGATTCTTTACTTCTTTATCCCCCGTTCCCCGCTGT
TTGTGGTTCTGCTGGTCGGAAGAGCGCTGGCCTGGTATTCGTTTATGTGG
GGAGTGATATGTGGTCTTCTCTGGGGAAGATGAAAAGTGAAAGAAAAGAT
CATACATATTGATAGAAATGTGCAGTTTGCGGGTATTCGTGTTCCTAGAG
TATTATTTGGTACTCGAGAGATAGAACATTGAGCTGTACGTTGAGCACGG
ATCAATTGTCTAATATAAACAAAATACTAAAACGTGATACTACAAAGTCG
CCCGAAACTGGATACCTTAATGTAGATCGACAAGTGTCAGCCAGTACTTG
GTATGTGACTAGCTTGAAATGGAATATGGCATGAGACATCAAACAAATAG
TAAATAATCCTGCTCAAAACAGACCAGAATAACCATCCTTATCGTTCTAT
GTACAAGCTACAAAGGTTGCTAAAGCCTGCCAGTCAAACTCAATTTTACT
ACCAACTAGCTATCTACCCAACTTTAAACCTGATAAACTCCCTCAAATTG
AACCCCTTTTACACTATCATCCCTTAATATGCGCTTTGAAGTTGTATTCT
GTGCCATCAGCACCTTTTGTTTTACTTCCTCTTAGCCAATGTCGGCCGCT
TGATCTTAGCTGCAGTCATTGAGAGCCTTCTACGTTTCATAGATCAGGCT
CACGCCAAAGACCAAAGCGTCTACCCCAATGAGATGATAGCAAAATTAGA
TGGCGCCTGCTCCCTGATCGAATCCTCGAGCGCTTTCGAACACCAAAAGA
AAGACCAGCAATGCCACGACTTTGAGCAAGAAGGCAAGACAATTGACCGT
CGTCAGGTAGCCACTGACGATTTACTCAACTCTCTTCTGGTATGTTACAT
GCTCCATTGATATGTATTGTCAACTGACATCACATCCTCTAGGAATTCCT
CTCGGTAAGTAGGCACTTAACGTCTTCGCCAGAGCTGAATTGTTCTGTAC
TGATCACTGCGATTCGGTTCCAGGAATTACTTTCTGTAAGTGAATACATA
AAGCCCATTACCGGTTCGATTAGAGTCTAACCATCTCTTTCAGCAAGCTT
AAAGCCCGTAGTAGGCAAGCGATCGTCCAAGATGCTTCCTGCTCTTTCGG
TACGTTTCATGTTCTATCAAGATGCATGGTGAACTGATATACCCTATACT
TTTGTTGGTAAGTACGTCTGAGGATTTGGCGGGACAATCAGTACTGATTG
TCGTGCTCATTTTTCAGAGCCTTCTGAATATGAGTGAACAGAGTATCTGA
TGTGTATCAGGTTCGGGATTTACATCTTATTTTGTGTTGAGTTTCTAGTT
TGTATTCTTGATAAGGCATCATGACTACAGGATGCCGTCTTTCGTGTATG
GAAGTATCTGGTAGCTTTCACTCCGCTGCAGCTTAGGTACTTGAACTGGT
GTGGAATGAGAGCAGTTCTAATGCTGATATGATGAATCTTGACCTCAGCG
AAGCGGGCGACGTCATGGGTAGTAGTTGTTCGACCAGAAAAGCTCATTAC
AATACAGCCTTTTTCCCATATAGGATAGCGCCTGGGCATTTAGG
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Coding sequence (CDS) from alignment at ch4:3161691..3164034-

>KJC3_005590-T1 ID=KJC3_005590-T1|Name=KJC3_005590-T1|organism=Aspergillus niger KJC3|type=CDS|length=930bp|location=Sequence derived from alignment at ch4:3161691..3164034- (Aspergillus niger KJC3)
GCCGGACGCTCCGGTGCCCCCGAAGGCCAGCACCTGACCAAGGTCGACCG
CAGCGACGACATCGTCAAGCCCAAGACCGTTGGCTACCAGGTGGCCGATG
CGATCAAGAAGCGCCGAAACGAGGACGGCTACAAGATGACTCAGAAGGAA
CTCGCCACCAAGTGCAACACCACCATCACTGTTGTTCAGGACTTCGAGCG
CGGTACTGCTGCTCCGGACCAGAAGGTCCTCAGTGCCATGGAGCGCGTGC
TGAACGTTAAGCTGAGGGGTACGGGCATCGGGCAGGAGAAGTTCCCTAAG
AAGAAGTAAATGAGCGACTGGGACTCTGTTACGCGCATTGGAGCCAGGCA
CACTGGTGGCCCTGCCACCCGCGAGACCGTCGTCAAGGGTAAGAGCGCCT
TGAACGCCGCCCAGCGTAACGGTCTCGTTATCGGTACTGAGAAGAAGTAT
GCTACTGGTAACGCTGCCGGACGCTCCGGTGCCCCCGAAGGCCAGCACCT
GACCAAGGTCGACCGCAGCGACGACATCGTCAAGCCCAAGACCGTTGGCT
ACCAGGTGGCCGATGCGATCAAGAAGCGCCGAAACGAGGACGGCTACAAG
ATGACTCAGAAGGAACTCGCCACCAAGTGCAACACCACCATCACTGTTGT
TCAGGACTTCGAGCGCGGTACTGCTGCTCCGGACCAGAAGGTCCTCAGTG
CCATGGAGCGCGTGCTGAACGTTAAGCTGAGGGGTACGGGCATCGGGCAG
GAGAAGTTCCCTAAGAAGAAGTAAATGAGCGACTGGGACTCTGTTACGCG
CATTGGAGCCAGGCACACTGGTGGCCCTGCCACCCGCGAGACCGTCGTCA
AGGGTAAGAGCGCCTTGAACGCCGCCCAGCGTAACGGTCTCGTTATCGGT
ACTGAGAAGAAGTATGCTACTGGTAACGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MBF1KJC3_005590Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005590-T1KJC3_005590-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005590-T1.cdsKJC3_005590-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005590-T1.utr3p6KJC3_005590-T1.utr3p6Aspergillus niger KJC3three_prime_UTR
KJC3_005590-T1.utr3p5KJC3_005590-T1.utr3p5Aspergillus niger KJC3three_prime_UTR
KJC3_005590-T1.utr3p4KJC3_005590-T1.utr3p4Aspergillus niger KJC3three_prime_UTR
KJC3_005590-T1.utr3p3KJC3_005590-T1.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_005590-T1.utr3p2KJC3_005590-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_005590-T1.utr3p1KJC3_005590-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005590-T1.exon7KJC3_005590-T1.exon7Aspergillus niger KJC3exon
KJC3_005590-T1.exon6KJC3_005590-T1.exon6Aspergillus niger KJC3exon
KJC3_005590-T1.exon5KJC3_005590-T1.exon5Aspergillus niger KJC3exon
KJC3_005590-T1.exon4KJC3_005590-T1.exon4Aspergillus niger KJC3exon
KJC3_005590-T1.exon3KJC3_005590-T1.exon3Aspergillus niger KJC3exon
KJC3_005590-T1.exon2KJC3_005590-T1.exon2Aspergillus niger KJC3exon
KJC3_005590-T1.exon1KJC3_005590-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264MN3
DBxrefInterPro:IPR010982
DBxrefInterPro:IPR013729
DBxrefInterPro:IPR001387
DBxrefPFAM:PF08523
DBxrefPFAM:PF01381
Productmultiprotein-bridging factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3161691..3164034 -
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