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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3172939..3174250+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005594-T1 ID=KJC3_005594-T1|Name=KJC3_005594-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1312bp|location=Sequence derived from alignment at ch4:3172939..3174250+ (Aspergillus niger KJC3)
ATGTCTGAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTT
TCCTCGTGGGTAACCCTTTCATGCATTATTGCCGCTCAATACTAAACAGC
TCATTATATAGCTCCACCAAATGGCGCCGGTATGGTACCACAGATAAATT
GATATCTTGCGTCTAGCTGATAATCTCTAGCATATCAACCTCCATCCCAG
ACCCCTCCGAACATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACA
GCAGCCTATATCTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCTT
CTCCACAAGGCCCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCA
GCTGAGAATGCTGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATC
GGAAGCCCAGCAAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCATA
CAGATGCGACTCTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCC
ACATCAACATATGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAG
GGTCAGTCATCGAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTGG
GGTGTCCCATCCAAGCGAGACCCGGTATGTCGCGTAGCCTTATTATACAC
TGCATGAGACTAAGTTTTGCATACGACAGGAATCATGATCGCGATGTCTC
CTTCTATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTT
GCAGGAGGCCAATTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCT
ACTCGCCCCATCTATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCC
ATACAGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGC
GTTAACATCAACTTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGG
CGAAGGTTTCATCGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGC
AGAGCTTCGGAGCGATTGTCAAGAAAGAAGTATGTTATTCTACCTCCCTT
AGCTCTGAAAATCGAGTGATGAGCCAAACTAATGTGATTGTAGCTCGCCG
ATGATGAAACGTACTACGTAAATAACGGCCATCTGGTAGCATGGAATTGC
CGCTACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTAACTGGAG
TGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACTGTGTATA
TGCAGACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAACAGCATT
GCTAAAAGCTAA back to topCoding sequence (CDS) from alignment at ch4:3172939..3174250+ >KJC3_005594-T1 ID=KJC3_005594-T1|Name=KJC3_005594-T1|organism=Aspergillus niger KJC3|type=CDS|length=5430bp|location=Sequence derived from alignment at ch4:3172939..3174250+ (Aspergillus niger KJC3)
ATGTCTGAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTT
TCCTCCTCCACCAAATGGCGCCGCATATCAACCTCCATCCCAGACCCCTC
CGAACATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACAGCAGCCT
ATATCTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCTTCTCCACA
AGGCCCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCAGCTGAGA
ATGCTGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATCGGAAGCC
CAGCAAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCATACAGATGC
GACTCTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCCACATCAA
CATATGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAGGGTCAGT
CATCGAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTGGGGTGTCC
CATCCAAGCGAGACCCGGAATCATGATCGCGATGTCTCCTTCTATGTCCC
TCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCCAA
TTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCTACTCGCCCCATC
TATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCCATACAGAGTGGA
CCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGTTAACATCAAC
TTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTCAT
CGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGGAG
CGATTGTCAAGAAAGAACTCGCCGATGATGAAACGTACTACGTAAATAAC
GGCCATCTGGTAGCATGGAATTGCCGCTACAAGATTGAACGAGTTGCTTC
GGGTGGTATTATCTCTAACTGGAGTGCAGGCGAGGGTCTTGCCTGTAGAT
TCACAGGCCCTGGCACTGTGTATATGCAGACACGCAATGTGTCCTCCTTC
GTTGCCCATTTGGGCAACAGCATTGCTAAAAGCTAAATGTCTGAACAAGT
TGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTTTCCTCCTCCACCAA
ATGGCGCCGCATATCAACCTCCATCCCAGACCCCTCCGAACATTCCTCCT
CCAAACTTCAGCTTTCCTCCGCCTCCACAGCAGCCTATATCTTCACACGA
GGACAAGGCTGATGTTTCACCAATCTCTTCTCCACAAGGCCCGCCAACCC
CGCCGATAAATGAGAAGGCTGTTTATGCAGCTGAGAATGCTGGATCATTT
TCTGCCAACTCGGCTATGTTTAGTTCATCGGAAGCCCAGCAAGCACCAAC
ACCAGGGCCAGGTCTCACACGAGCGCATACAGATGCGACTCTTGCCAGCC
GAATTGCCCCAAAACACTTCGTAGGAGCCACATCAACATATGCGGACGAT
GTAGGGACTTTCAACGGTGGCAGCTATAGGGTCAGTCATCGAGACACAAA
CACTCTCTTAACCATTCAGCTGGCGGTGGGGTGTCCCATCCAAGCGAGAC
CCGGAATCATGATCGCGATGTCTCCTTCTATGTCCCTCAGAGGTTCGCTC
TCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCCAATTGGCCCGTTCAAC
ATACACCGGCCCTGGTGAACTCCTACTCGCCCCATCTATTCTTGGAGATG
TCACTATCATCCGTCTGGACGGCCATACAGAGTGGACCGTAGGGAAGGAC
GCCTTTCTTGCTTGTACAGTGGGCGTTAACATCAACTTCAAAACTCAAGG
TCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTCATCGTGTTCAAATTCA
CCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGGAGCGATTGTCAAGAAA
GAACTCGCCGATGATGAAACGTACTACGTAAATAACGGCCATCTGGTAGC
ATGGAATTGCCGCTACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCT
CTAACTGGAGTGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGC
ACTGTGTATATGCAGACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGG
CAACAGCATTGCTAAAAGCTAAATGTCTGAACAAGTTGTTTATCCACCAC
CTCCAAGCCAAGCGCCTACTTTTCCTCCTCCACCAAATGGCGCCGCATAT
CAACCTCCATCCCAGACCCCTCCGAACATTCCTCCTCCAAACTTCAGCTT
TCCTCCGCCTCCACAGCAGCCTATATCTTCACACGAGGACAAGGCTGATG
TTTCACCAATCTCTTCTCCACAAGGCCCGCCAACCCCGCCGATAAATGAG
AAGGCTGTTTATGCAGCTGAGAATGCTGGATCATTTTCTGCCAACTCGGC
TATGTTTAGTTCATCGGAAGCCCAGCAAGCACCAACACCAGGGCCAGGTC
TCACACGAGCGCATACAGATGCGACTCTTGCCAGCCGAATTGCCCCAAAA
CACTTCGTAGGAGCCACATCAACATATGCGGACGATGTAGGGACTTTCAA
CGGTGGCAGCTATAGGGTCAGTCATCGAGACACAAACACTCTCTTAACCA
TTCAGCTGGCGGTGGGGTGTCCCATCCAAGCGAGACCCGGAATCATGATC
GCGATGTCTCCTTCTATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGGAT
GAAAGCCCTTGCAGGAGGCCAATTGGCCCGTTCAACATACACCGGCCCTG
GTGAACTCCTACTCGCCCCATCTATTCTTGGAGATGTCACTATCATCCGT
CTGGACGGCCATACAGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCTTG
TACAGTGGGCGTTAACATCAACTTCAAAACTCAAGGTCTTATGAAGGGTG
TGTTCTCCGGCGAAGGTTTCATCGTGTTCAAATTCACCGGCTCCGGGTTG
GTATGGATGCAGAGCTTCGGAGCGATTGTCAAGAAAGAACTCGCCGATGA
TGAAACGTACTACGTAAATAACGGCCATCTGGTAGCATGGAATTGCCGCT
ACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTAACTGGAGTGCA
GGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACTGTGTATATGCA
GACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAACAGCATTGCTA
AAAGCTAAATGTCTGAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCG
CCTACTTTTCCTCCTCCACCAAATGGCGCCGCATATCAACCTCCATCCCA
GACCCCTCCGAACATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCAC
AGCAGCCTATATCTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCT
TCTCCACAAGGCCCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGC
AGCTGAGAATGCTGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCAT
CGGAAGCCCAGCAAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCAT
ACAGATGCGACTCTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGC
CACATCAACATATGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATA
GGGTCAGTCATCGAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTG
GGGTGTCCCATCCAAGCGAGACCCGGAATCATGATCGCGATGTCTCCTTC
TATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGCAG
GAGGCCAATTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCTACTC
GCCCCATCTATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCCATAC
AGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGTTA
ACATCAACTTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCGAA
GGTTTCATCGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGCAGAG
CTTCGGAGCGATTGTCAAGAAAGAACTCGCCGATGATGAAACGTACTACG
TAAATAACGGCCATCTGGTAGCATGGAATTGCCGCTACAAGATTGAACGA
GTTGCTTCGGGTGGTATTATCTCTAACTGGAGTGCAGGCGAGGGTCTTGC
CTGTAGATTCACAGGCCCTGGCACTGTGTATATGCAGACACGCAATGTGT
CCTCCTTCGTTGCCCATTTGGGCAACAGCATTGCTAAAAGCTAAATGTCT
GAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTTTCCTCC
TCCACCAAATGGCGCCGCATATCAACCTCCATCCCAGACCCCTCCGAACA
TTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACAGCAGCCTATATCT
TCACACGAGGACAAGGCTGATGTTTCACCAATCTCTTCTCCACAAGGCCC
GCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCAGCTGAGAATGCTG
GATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATCGGAAGCCCAGCAA
GCACCAACACCAGGGCCAGGTCTCACACGAGCGCATACAGATGCGACTCT
TGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCCACATCAACATATG
CGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAGGGTCAGTCATCGA
GACACAAACACTCTCTTAACCATTCAGCTGGCGGTGGGGTGTCCCATCCA
AGCGAGACCCGGAATCATGATCGCGATGTCTCCTTCTATGTCCCTCAGAG
GTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCCAATTGGCC
CGTTCAACATACACCGGCCCTGGTGAACTCCTACTCGCCCCATCTATTCT
TGGAGATGTCACTATCATCCGTCTGGACGGCCATACAGAGTGGACCGTAG
GGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGTTAACATCAACTTCAAA
ACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTCATCGTGTT
CAAATTCACCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGGAGCGATTG
TCAAGAAAGAACTCGCCGATGATGAAACGTACTACGTAAATAACGGCCAT
CTGGTAGCATGGAATTGCCGCTACAAGATTGAACGAGTTGCTTCGGGTGG
TATTATCTCTAACTGGAGTGCAGGCGAGGGTCTTGCCTGTAGATTCACAG
GCCCTGGCACTGTGTATATGCAGACACGCAATGTGTCCTCCTTCGTTGCC
CATTTGGGCAACAGCATTGCTAAAAGCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016031 |
| DBxref | InterPro:IPR002838 |
| DBxref | InterPro:IPR036983 |
| DBxref | PFAM:PF01987 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3172939..3174250 + |
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