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KJC3_005597-T1, KJC3_005597-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005597-T1
Unique NameKJC3_005597-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3177616..3179147-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005597-T1 ID=KJC3_005597-T1|Name=KJC3_005597-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1532bp|location=Sequence derived from alignment at ch4:3177616..3179147- (Aspergillus niger KJC3)
CTAGGCTAGCTGCGGGAAACCGTTAGTTTTTTGTGATTTCCCAGCCCGAG
GGAATGGTTACCCTTCAAGACATGCATGCGGCAGATAGTTAGTTAGATAG
TTAGATGGGTGTTGATAAGGGTACTTCTTGATGTGTGGTTGCACACACAT
ATCCCCTTTCCATTCTTCTATCTTGTCCCCTCTTCGTTCTTGGTCTTGGG
GCTAGTGCCTATCACCGTTAGTTTCTATTTCCATCCATGGTGTTGAGGAA
GGTGGTACTGCTGCTGGTGGTTTCTTTTTTGTTTCGTTTGCAGATCGGGG
ACTGGAGTGCGTGGCGTGGATGGGCAGACAGGCAAGATGGCTGTGTTTGA
GGGGTATGTGATATCTACAATTAGTACGGTGAGGGGTATGGATGGATGGA
TGCGTGGATGTGTCTAGTTCACTCGCAATCTTTCAGTTGCATTAGCGCAG
AACTTGAGCGTTGCCTTTGCCTCACCTTACCTTGCAGTAGGTTGATCCGT
GCTGTTGGGTCTTTTTGTCTGGTTTGGTCTGTGGGGGTCTAGAAGAGAGT
GAGTAGATGACGCATGTGCGTGAAATCGAGTGAATGGAGGGAGGTATGCG
CTAGAAGGGGGTGTGCTATATAAGAGTGTTTGCTAACCGCTTGTATGGAC
ATTCAGTATTTCATCAACAGCGATATTCTCTTCAGTATATCTACTGTATT
CCATTCCACAATCACGTCTACACACATTCGATCAGCCAGCTATATTGAAC
AACCAGCCATCATCATGTCTACCCATCGATTGACTGAGCACAACCTCTTC
ATCCATGACCAAACCATCGATATCAAGCAGGTACGTCTATACCTCATCAT
CTTATGAAATAACGCTTCTAACAAGAATTCAGGACCCCAAACGGACCTCC
AACCGAATGCAGGACCATGGAAAGAATCAAAACCAGAACCAGAAGCAAAT
ACCTTCCTGGCTCATAACTCTCATATCATCCGAACACATGCACAAGCTCA
ACTCTCAGTTGGCTCTCAACCTCTCCAAACTTCCTTCAACCACCACCAGC
AATAACACCTCCAATACCACAAAAGACACGGACATAGACATCGACGCAGA
CATCCAGCACATCACAAACGTTCTCTCATCTCTTCCACCTCACGACCCTA
TCTTCTCCAGATTCAAGTTGCTGGAAGATATCCTCAGTACACAAGCACAC
AGCCGCCAGGAGAACCTTAGCTCAAACCCAATCCCTCTAGAGCGCTTCCT
CACGCCCGGATACAGTGATCCGTACTACATTGTGGAAAGGGCGTTAGAGG
AGCTGGGCATCCCGTTTGGGAATCTGGAGAGTGGTGAGATGCGAAGAAAC
ATGGCGAGGGAGAACGTTGATGCTGTGAGGGAGGCTACGATGGGGATGGA
GGCGAATAGTGTGTGTGAGGGGAGGGTAGGTAGGACTATCTAGTTGGTTG
GTCGGTCTTGACTGGGTCAGACGAAGTGTTTCTTTCATTTGTTCAATGAC
TGAGGGGGATATGGTTGCTTGAATGAGTTAGG
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Coding sequence (CDS) from alignment at ch4:3177616..3179147-

>KJC3_005597-T1 ID=KJC3_005597-T1|Name=KJC3_005597-T1|organism=Aspergillus niger KJC3|type=CDS|length=2232bp|location=Sequence derived from alignment at ch4:3177616..3179147- (Aspergillus niger KJC3)
GACCCCAAACGGACCTCCAACCGAATGCAGGACCATGGAAAGAATCAAAA
CCAGAACCAGAAGCAAATACCTTCCTGGCTCATAACTCTCATATCATCCG
AACACATGCACAAGCTCAACTCTCAGTTGGCTCTCAACCTCTCCAAACTT
CCTTCAACCACCACCAGCAATAACACCTCCAATACCACAAAAGACACGGA
CATAGACATCGACGCAGACATCCAGCACATCACAAACGTTCTCTCATCTC
TTCCACCTCACGACCCTATCTTCTCCAGATTCAAGTTGCTGGAAGATATC
CTCAGTACACAAGCACACAGCCGCCAGGAGAACCTTAGCTCAAACCCAAT
CCCTCTAGAGCGCTTCCTCACGCCCGGATACAGTGATCCGTACTACATTG
TGGAAAGGGCGTTAGAGGAGCTGGGCATCCCGTTTGGGAATCTGGAGAGT
GGTGAGATGCGAAGAAACATGGCGAGGGAGAACGTTGATGCTGTGAGGGA
GGCTACGATGGGGATGGAGGCGAATAGTGTGTGTGAGGGGAGGGTAGGTA
GGACTATCTAGTATTTCATCAACAGCGATATTCTCTTCAGTATATCTACT
GTATTCCATTCCACAATCACGTCTACACACATTCGATCAGCCAGCTATAT
TGAACAACCAGCCATCATCATGTCTACCCATCGATTGACTGAGCACAACC
TCTTCATCCATGACCAAACCATCGATATCAAGCAGATGACGCATGACCCC
AAACGGACCTCCAACCGAATGCAGGACCATGGAAAGAATCAAAACCAGAA
CCAGAAGCAAATACCTTCCTGGCTCATAACTCTCATATCATCCGAACACA
TGCACAAGCTCAACTCTCAGTTGGCTCTCAACCTCTCCAAACTTCCTTCA
ACCACCACCAGCAATAACACCTCCAATACCACAAAAGACACGGACATAGA
CATCGACGCAGACATCCAGCACATCACAAACGTTCTCTCATCTCTTCCAC
CTCACGACCCTATCTTCTCCAGATTCAAGTTGCTGGAAGATATCCTCAGT
ACACAAGCACACAGCCGCCAGGAGAACCTTAGCTCAAACCCAATCCCTCT
AGAGCGCTTCCTCACGCCCGGATACAGTGATCCGTACTACATTGTGGAAA
GGGCGTTAGAGGAGCTGGGCATCCCGTTTGGGAATCTGGAGAGTGGTGAG
ATGCGAAGAAACATGGCGAGGGAGAACGTTGATGCTGTGAGGGAGGCTAC
GATGGGGATGGAGGCGAATAGTGTGTGTGAGGGGAGGGTAGGTAGGACTA
TCTAGTATTTCATCAACAGCGATATTCTCTTCAGTATATCTACTGTATTC
CATTCCACAATCACGTCTACACACATTCGATCAGCCAGCTATATTGAACA
ACCAGCCATCATCATGTCTACCCATCGATTGACTGAGCACAACCTCTTCA
TCCATGACCAAACCATCGATATCAAGCAGATGACGCATGACCCCAAACGG
ACCTCCAACCGAATGCAGGACCATGGAAAGAATCAAAACCAGAACCAGAA
GCAAATACCTTCCTGGCTCATAACTCTCATATCATCCGAACACATGCACA
AGCTCAACTCTCAGTTGGCTCTCAACCTCTCCAAACTTCCTTCAACCACC
ACCAGCAATAACACCTCCAATACCACAAAAGACACGGACATAGACATCGA
CGCAGACATCCAGCACATCACAAACGTTCTCTCATCTCTTCCACCTCACG
ACCCTATCTTCTCCAGATTCAAGTTGCTGGAAGATATCCTCAGTACACAA
GCACACAGCCGCCAGGAGAACCTTAGCTCAAACCCAATCCCTCTAGAGCG
CTTCCTCACGCCCGGATACAGTGATCCGTACTACATTGTGGAAAGGGCGT
TAGAGGAGCTGGGCATCCCGTTTGGGAATCTGGAGAGTGGTGAGATGCGA
AGAAACATGGCGAGGGAGAACGTTGATGCTGTGAGGGAGGCTACGATGGG
GATGGAGGCGAATAGTGTGTGTGAGGGGAGGGTAGGTAGGACTATCTAGT
ATTTCATCAACAGCGATATTCTCTTCAGTATATCTACTGTATTCCATTCC
ACAATCACGTCTACACACATTCGATCAGCCAGCTATATTGAACAACCAGC
CATCATCATGTCTACCCATCGATTGACTGAGCACAACCTCTTCATCCATG
ACCAAACCATCGATATCAAGCAGATGACGCAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005597KJC3_005597Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005597-T1KJC3_005597-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005597-T1.cdsKJC3_005597-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005597-T1.utr3p1KJC3_005597-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005597-T1.exon3KJC3_005597-T1.exon3Aspergillus niger KJC3exon
KJC3_005597-T1.exon2KJC3_005597-T1.exon2Aspergillus niger KJC3exon
KJC3_005597-T1.exon1KJC3_005597-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005597-T1.utr5p1KJC3_005597-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3177616..3179147 -
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