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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3185720..3186323+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005599-T1 ID=KJC3_005599-T1|Name=KJC3_005599-T1|organism=Aspergillus niger KJC3|type=mRNA|length=604bp|location=Sequence derived from alignment at ch4:3185720..3186323+ (Aspergillus niger KJC3)
ATGGCTAAGCTCTTCATCGGGTCTGTCAATTCTGTTTCCTTTTTGGCTAC
CCCGCCCCCAATATCAGACTGACCAAAATCAGCGGCCTTGCCTGGCACAC
CACTGACGAGACCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAG
AAGCCGTTGGTCATCCATGTTTCGCGGAGCAATGAAAGTTCTCCCTTATC
ATGCTCGTACTGACCGAACTCAGATCGTCGTCAAGGACCATGACACCCAC
CGCAGCCGTGGATTCGGGTTTGTCCGCTTCGCCAGTGATGTTGAGGCCGA
CGCTGCCATGAATGCCATGAACAACCAGGAGTAAGCAAGCTATCTAAATG
CTCCTCTTTCCAGACACTCACCACTTCAGATTCGACGGCCGTGTCATCCG
TGTCGACAAAGCCTCGGAGTCGAGACCGCGCATGGGTGGAGGTGGATTCC
ATGGACGCGGTGGCTACAACCGTGGCTACAACGGCGGCGGTGAGTTCTTC
TTGGTCACTGCCATCAAGGCCCTCTTGAATTATATATTGTATCATATAAC
TAACAAGAAGCAGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGA
GTAA back to topCoding sequence (CDS) from alignment at ch4:3185720..3186323+ >KJC3_005599-T1 ID=KJC3_005599-T1|Name=KJC3_005599-T1|organism=Aspergillus niger KJC3|type=CDS|length=1755bp|location=Sequence derived from alignment at ch4:3185720..3186323+ (Aspergillus niger KJC3)
ATGGCTAAGCTCTTCATCGGCGGCCTTGCCTGGCACACCACTGACGAGAC
CCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATCGTCG
TCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTGTCCGCTTC
GCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAACAACCAGGA
ATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCGC
GCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTAC
AACGGCGGCGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGTA
AATGGCTAAGCTCTTCATCGGCGGCCTTGCCTGGCACACCACTGACGAGA
CCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATCGTC
GTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTGTCCGCTT
CGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAACAACCAGG
AATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACCG
CGCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCTA
CAACGGCGGCGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAGT
AAATGGCTAAGCTCTTCATCGGCGGCCTTGCCTGGCACACCACTGACGAG
ACCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATCGT
CGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTGTCCGCT
TCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAACAACCAG
GAATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGACC
GCGCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGCT
ACAACGGCGGCGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGAG
TAAATGGCTAAGCTCTTCATCGGCGGCCTTGCCTGGCACACCACTGACGA
GACCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATCG
TCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTGTCCGC
TTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAACAACCA
GGAATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGAC
CGCGCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGGC
TACAACGGCGGCGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAGA
GTAAATGGCTAAGCTCTTCATCGGCGGCCTTGCCTGGCACACCACTGACG
AGACCCTCCGCGAGGGATTCTCGCAATACGGAACAATCGAAGAAGCCATC
GTCGTCAAGGACCATGACACCCACCGCAGCCGTGGATTCGGGTTTGTCCG
CTTCGCCAGTGATGTTGAGGCCGACGCTGCCATGAATGCCATGAACAACC
AGGAATTCGACGGCCGTGTCATCCGTGTCGACAAAGCCTCGGAGTCGAGA
CCGCGCATGGGTGGAGGTGGATTCCATGGACGCGGTGGCTACAACCGTGG
CTACAACGGCGGCGGCTGGCGTTCCCAGCAGCAGGAGCCTGAGGCTACAG
AGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3185720..3186323 + |
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