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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3253948..3255171- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005627-T1 ID=KJC3_005627-T1|Name=KJC3_005627-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1224bp|location=Sequence derived from alignment at ch4:3253948..3255171- (Aspergillus niger KJC3)
GAACGTCCTGCAACGCTCAGCTCGCAGATCGCGACAATAATCCGACTCTC
TAGGGTTCACTGTGCTTTTTGTGCGGCCCCGTTAGCCTGGTGGTGGGTTC
CTGTTCGATCCCATCAAATCTCCGCCCACTCCAAGCTCCAGCGCTCGCGA
TCCCGACGATAGCCACACCTCTCGGAAAAGGCATTCACTTGTCCTATACA
AACACCAAAAGCCTCACGCATCAAACATGGCCTCCACCTTCTCTGTCTGC
CGGCTTCCGGCCGCGCTTGCCCGCCGCCAATCCCGTGTTCTCAGCACTTC
CAAGCGTGAGTTTCCCGCCAGAATACCACTTGATATCAACTTTCCCACAT
CACCATATCCCTCCCTTCCACGTCCACTCTCACCCATCAAATACCTCATG
TTCAATACAGCTAACATGGCATTCACCCTATAGGCCTGAACTCCACCTCC
GCCCCTCAAACCCAGAACCCCGCCTACCCTCTCTATCCCTCCGTCACCCA
GCTCCTCCATGAAAAAGGCATCCCGGAGTCCGAAGTGTCCAAGATCCCCG
CGTCCGGCCCTAAGGGCCGTCTCCTGAAGGGCGACGTTCTCGCCTACCTG
GGCGCCATCCCCGCCGAGTACCCTTCTGAGCAAGCAGCCCGGCTCGCCAA
GCTCGCCCACCTCGACCTGAGCAACATCAAGATCGCCGCGCCCGTCAAGC
CCGCGGAGCCCGCCCCTGCCGTGGAAGAGAAGCCCGTTGCCCGTCCCCCG
CCGACCACCTCCGTCGCCGTCTCCATCTCCCTGGCCGCCGTGCTGTCCGT
TCAGAAGAAGATTAAAGAAACCCTGGGTACCACGGTGCCGCTGTCGACGT
TCCTGGCCCGCGCTACCGACCTGGCAAACGACGACCTGCCCCGCTCTTCC
CGCGAGACTCCTTCCGCTGATGAGCTCTTCGACGAGATCCTGGGTGCTCA
ACCCATCAAGTTTACCCGGGGGGAGTACATCCCTGAGTTGAATGCTGAGG
AGGCCCGGCCGGTGCAGAAGAAGCAGAAGGTGGAGGATGATCTGATTGAT
TTCTTGGCCGGAAAGGTTTCCAAGAAGGCTGCTGCTACTGCTAAGAGCGT
TGTTGAGCCGGCGGCGAACGTGTTCAGCTTGACTGTCCCGGTTGAGGAGG
AGAAGAGGGCGAAGGTTTTCTTGGACCGCGTGAAGACCTTGTTGACTGTT
GAACCTGGCAGGCTGGTTCTATAG back to topCoding sequence (CDS) from alignment at ch4:3253948..3255171- >KJC3_005627-T1 ID=KJC3_005627-T1|Name=KJC3_005627-T1|organism=Aspergillus niger KJC3|type=CDS|length=1740bp|location=Sequence derived from alignment at ch4:3253948..3255171- (Aspergillus niger KJC3)
GCCTGAACTCCACCTCCGCCCCTCAAACCCAGAACCCCGCCTACCCTCTC
TATCCCTCCGTCACCCAGCTCCTCCATGAAAAAGGCATCCCGGAGTCCGA
AGTGTCCAAGATCCCCGCGTCCGGCCCTAAGGGCCGTCTCCTGAAGGGCG
ACGTTCTCGCCTACCTGGGCGCCATCCCCGCCGAGTACCCTTCTGAGCAA
GCAGCCCGGCTCGCCAAGCTCGCCCACCTCGACCTGAGCAACATCAAGAT
CGCCGCGCCCGTCAAGCCCGCGGAGCCCGCCCCTGCCGTGGAAGAGAAGC
CCGTTGCCCGTCCCCCGCCGACCACCTCCGTCGCCGTCTCCATCTCCCTG
GCCGCCGTGCTGTCCGTTCAGAAGAAGATTAAAGAAACCCTGGGTACCAC
GGTGCCGCTGTCGACGTTCCTGGCCCGCGCTACCGACCTGGCAAACGACG
ACCTGCCCCGCTCTTCCCGCGAGACTCCTTCCGCTGATGAGCTCTTCGAC
GAGATCCTGGGTGCTCAACCCATCAAGTTTACCCGGGGGGAGTACATCCC
TGAGTTGAATGCTGAGGAGGCCCGGCCGGTGCAGAAGAAGCAGAAGGTGG
AGGATGATCTGATTGATTTCTTGGCCGGAAAGGTTTCCAAGAAGGCTGCT
GCTACTGCTAAGAGCGTTGTTGAGCCGGCGGCGAACGTGTTCAGCTTGAC
TGTCCCGGTTGAGGAGGAGAAGAGGGCGAAGGTTTTCTTGGACCGCGTGA
AGACCTTGTTGACTGTTGAACCTGGCAGGCTGGTTCTATAGATGGCCTCC
ACCTTCTCTGTCTGCCGGCTTCCGGCCGCGCTTGCCCGCCGCCAATCCCG
TGTTCTCAGCACTTCCAAGCGCCTGAACTCCACCTCCGCCCCTCAAACCC
AGAACCCCGCCTACCCTCTCTATCCCTCCGTCACCCAGCTCCTCCATGAA
AAAGGCATCCCGGAGTCCGAAGTGTCCAAGATCCCCGCGTCCGGCCCTAA
GGGCCGTCTCCTGAAGGGCGACGTTCTCGCCTACCTGGGCGCCATCCCCG
CCGAGTACCCTTCTGAGCAAGCAGCCCGGCTCGCCAAGCTCGCCCACCTC
GACCTGAGCAACATCAAGATCGCCGCGCCCGTCAAGCCCGCGGAGCCCGC
CCCTGCCGTGGAAGAGAAGCCCGTTGCCCGTCCCCCGCCGACCACCTCCG
TCGCCGTCTCCATCTCCCTGGCCGCCGTGCTGTCCGTTCAGAAGAAGATT
AAAGAAACCCTGGGTACCACGGTGCCGCTGTCGACGTTCCTGGCCCGCGC
TACCGACCTGGCAAACGACGACCTGCCCCGCTCTTCCCGCGAGACTCCTT
CCGCTGATGAGCTCTTCGACGAGATCCTGGGTGCTCAACCCATCAAGTTT
ACCCGGGGGGAGTACATCCCTGAGTTGAATGCTGAGGAGGCCCGGCCGGT
GCAGAAGAAGCAGAAGGTGGAGGATGATCTGATTGATTTCTTGGCCGGAA
AGGTTTCCAAGAAGGCTGCTGCTACTGCTAAGAGCGTTGTTGAGCCGGCG
GCGAACGTGTTCAGCTTGACTGTCCCGGTTGAGGAGGAGAAGAGGGCGAA
GGTTTTCTTGGACCGCGTGAAGACCTTGTTGACTGTTGAACCTGGCAGGC
TGGTTCTATAGATGGCCTCCACCTTCTCTGTCTGCCGGCTTCCGGCCGCG
CTTGCCCGCCGCCAATCCCGTGTTCTCAGCACTTCCAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016746 | transferase activity, transferring acyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005627-T1.utr5p1 | KJC3_005627-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004167 |
| DBxref | InterPro:IPR036625 |
| DBxref | PFAM:PF02817 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3253948..3255171 - |
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