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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3277885..3280345+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005633-T1 ID=KJC3_005633-T1|Name=KJC3_005633-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2461bp|location=Sequence derived from alignment at ch4:3277885..3280345+ (Aspergillus niger KJC3)
CGGAGAACCTCAACCTTCCAACTTGCTCTCACCTACCTGCATCTCTTTCC
ATCTGCTCCCCGACTTCTAGGGTCATGCGCTCTGAGCGTTGAAGCACACT
GGCTACGCTTTATCGTCCAAAAACTCAGTCCTCCGAACTCCATCCTTGGG
TTTGAATACAGTATCACTCGCCGCATTTGTTTGTAAGTCACCCACGGATT
CGTCCGCCATGCCTTAGATTGATAAGGAATCCGCATCCGTTTTGAATTAC
TTGCTCTGTTTTCCTTATCCCAACACTCGCCCTTTGATCTACCCTACCTT
GATCTGCCCGAGTGCAGCACCGGTCCTTCTTAGTCCAAGCTTGGCTATTT
ACCTACTCTAAACAACATGGGGATGCTGACTATAGGACGCTTCCTCAGCC
GGCCTTATCCACACTCCCGTGACGGCCCCACGATATTTTCCTTCCAGCAA
AGGCTCATCATGGAAGACGGTGGCTCCTATGATGCGAGAAAGCCAGAGTC
CGTGGCTAGCAGTAGCTCGCCTGCTTTGCAACCCACCACGGTCTACGATC
TCTCTGAAACGGAAGAGACGCTAAACTCGCCTGATACCTTCTACTCGCCG
CCTGCCTCGCCGGGCCGTCTGTCGCGCAACCCATCCTTCTCGTACCATGA
TGACTGGGAGACATTTCCGCCTCTCGACCAACTGACGGTGTTCGACCTGC
TTGATAACCTCTCGCTGTCACAGAGGCTGGAAAGGCTGCAGCGGGCACTC
AACGCGCAAAAGGACAAAGTCAAGAGACAACGCGAGAAGCTCAAGTCCAC
TTCGATCAACGCGAAGGAACGTGTTGTGGGCGAATGGAAGAGACGGATTC
CAACAGCCGATGAACAGCTAGACAAGTACCGCCGTCGCATGAAAGATGGC
GTAGAACGACTGGGCAAACAATGGAACGCTACCGCAACCGTCACACTGCG
TGAGAAAATCTCCTTCATCGCTGGTGTCATGAACATCCTTGTGAGCGGCT
ACCTTCTTGGAGGGTTCCCGGAATACTTCTACATTTGGTTCAGCGTGCAG
TTGGCCTACTTCATGCCTATCAGATACTACCGGTATCACAAAAAGGGCTA
TCATTATTTTTTGGCTGATCTCTGCTACTTTGTGAATGTGCTCTGTATGC
TTAGCCTCTGGGTTTTCCCGGGGTCGAAGAGGCTGTTTATCAGCACCTTC
TGCCTAGTATTCGGCAACAACGCCGTTGCAATTGCCATGTGGCGCAATTC
GATGGTTTTCCACAGTATGGACAAGGTGGTCAGGTAAGTTTCATTATTAT
GATGCCATTCTGAATAACCATTGACTTGAGGGTAGTCTCTTTATCCACAT
CATGCCACCCGTTTCCTTGCATTGTCTTGTCCATATGACGTCAGCGGAGA
CGCTGCGAGAACGATTCCCGGCAGTCTACGAGATCAAGTTCAGCGAACCG
GGTTCGCCCAATCACTTCAACCTCCTGGAGATGATGGGTTGGGCAACCGT
CCCTTACCTAATTTGGCAGTTGACGTATCACTGCTTTATCACTGTTCGTC
GTGCCGAGAAAATTGCTGCAGGACGTCCGACCAGCTTCACTTGGCTCCGC
AAGTCTTATGCCAAGACCTGGATCGGCAAGGTCGTTTTGAGCCTGCCCGA
ATCGCTCCAAGCTCCGGCTTTTATGATGATTCAGTATTTGTACGCGATAT
TGACCATGATTCCCTGCCCTCTGTGGTTTTGGTCTCGGTGGGCGAGCGGT
ATTTTCCTCACCGGTCTTTTCATTCTCAGCGTTCACAATGGCGCGACATA
CTATATTGACGTCTTCGGCAAGCGCTTCCAGAAGGAATTGGAAGAGCTGA
AGAGGGACGTCGCTCGCTGGCAATCGTCCCCAGAAGGAGTCGCGAGCCCG
ACGCTTCTGTCTTCTGACAATACTGCGACAGTCGGGGCCAAGGGCCTTGA
GGAATCGGCTAGTGGCGGATCCGACAAAGTCGGCGTTGACCAGATCCCTC
TTCTTGATGCCCAGTCGACTGGTGTAGAGAGCGGCCATGCCGCCGACAAC
TCTGGGGTCCGGGAAAGGTCTTGAGACGATCGTTACATGAAGCGCCTTAC
ACAATGCTCCCTTTGGTTCGTTCAGGAGTCTTGATTCTTGCCTATAGCTT
TGACTTGTGGATCCGACCAGATCGGAACCCATTCTCGTTGATACCCAGCT
TCCATCTGTTATCATTCCTTACTTTCTGGCCTGTCCTGTGCTGCATTTTC
TGCTTTTTAATTTCTGACACCGTATGGTTGGATACTTAGACTTGCGTGAT
GATTGATATGGCCTGTAATTACGATATGCTCTTTACATGAGAATTAATGA
CATGAAGATGTGGATAGTTAACTAGTGGGTTAGTTGGGGAAATGAACTGA
GTCACAATGGGGGTGAAATCGGGAGTCAGAAGCTTCCAGTAGCGAAGCCG
GCCGGACTCGC back to topCoding sequence (CDS) from alignment at ch4:3277885..3280345+ >KJC3_005633-T1 ID=KJC3_005633-T1|Name=KJC3_005633-T1|organism=Aspergillus niger KJC3|type=CDS|length=3312bp|location=Sequence derived from alignment at ch4:3277885..3280345+ (Aspergillus niger KJC3)
ATGGGGATGCTGACTATAGGACGCTTCCTCAGCCGGCCTTATCCACACTC
CCGTGACGGCCCCACGATATTTTCCTTCCAGCAAAGGCTCATCATGGAAG
ACGGTGGCTCCTATGATGCGAGAAAGCCAGAGTCCGTGGCTAGCAGTAGC
TCGCCTGCTTTGCAACCCACCACGGTCTACGATCTCTCTGAAACGGAAGA
GACGCTAAACTCGCCTGATACCTTCTACTCGCCGCCTGCCTCGCCGGGCC
GTCTGTCGCGCAACCCATCCTTCTCGTACCATGATGACTGGGAGACATTT
CCGCCTCTCGACCAACTGACGGTGTTCGACCTGCTTGATAACCTCTCGCT
GTCACAGAGGCTGGAAAGGCTGCAGCGGGCACTCAACGCGCAAAAGGACA
AAGTCAAGAGACAACGCGAGAAGCTCAAGTCCACTTCGATCAACGCGAAG
GAACGTGTTGTGGGCGAATGGAAGAGACGGATTCCAACAGCCGATGAACA
GCTAGACAAGTACCGCCGTCGCATGAAAGATGGCGTAGAACGACTGGGCA
AACAATGGAACGCTACCGCAACCGTCACACTGCGTGAGAAAATCTCCTTC
ATCGCTGGTGTCATGAACATCCTTGTGAGCGGCTACCTTCTTGGAGGGTT
CCCGGAATACTTCTACATTTGGTTCAGCGTGCAGTTGGCCTACTTCATGC
CTATCAGATACTACCGGTATCACAAAAAGGGCTATCATTATTTTTTGGCT
GATCTCTGCTACTTTGTGAATGTGCTCTGTATGCTTAGCCTCTGGGTTTT
CCCGGGGTCGAAGAGGCTGTTTATCAGCACCTTCTGCCTAGTATTCGGCA
ACAACGCCGTTGCAATTGCCATGTGGCGCAATTCGATGGTTTTCCACAGT
ATGGACAAGGTGGTCAGTCTCTTTATCCACATCATGCCACCCGTTTCCTT
GCATTGTCTTGTCCATATGACGTCAGCGGAGACGCTGCGAGAACGATTCC
CGGCAGTCTACGAGATCAAGTTCAGCGAACCGGGTTCGCCCAATCACTTC
AACCTCCTGGAGATGATGGGTTGGGCAACCGTCCCTTACCTAATTTGGCA
GTTGACGTATCACTGCTTTATCACTGTTCGTCGTGCCGAGAAAATTGCTG
CAGGACGTCCGACCAGCTTCACTTGGCTCCGCAAGTCTTATGCCAAGACC
TGGATCGGCAAGGTCGTTTTGAGCCTGCCCGAATCGCTCCAAGCTCCGGC
TTTTATGATGATTCAGTATTTGTACGCGATATTGACCATGATTCCCTGCC
CTCTGTGGTTTTGGTCTCGGTGGGCGAGCGGTATTTTCCTCACCGGTCTT
TTCATTCTCAGCGTTCACAATGGCGCGACATACTATATTGACGTCTTCGG
CAAGCGCTTCCAGAAGGAATTGGAAGAGCTGAAGAGGGACGTCGCTCGCT
GGCAATCGTCCCCAGAAGGAGTCGCGAGCCCGACGCTTCTGTCTTCTGAC
AATACTGCGACAGTCGGGGCCAAGGGCCTTGAGGAATCGGCTAGTGGCGG
ATCCGACAAAGTCGGCGTTGACCAGATCCCTCTTCTTGATGCCCAGTCGA
CTGGTGTAGAGAGCGGCCATGCCGCCGACAACTCTGGGGTCCGGGAAAGG
TCTTGAATGGGGATGCTGACTATAGGACGCTTCCTCAGCCGGCCTTATCC
ACACTCCCGTGACGGCCCCACGATATTTTCCTTCCAGCAAAGGCTCATCA
TGGAAGACGGTGGCTCCTATGATGCGAGAAAGCCAGAGTCCGTGGCTAGC
AGTAGCTCGCCTGCTTTGCAACCCACCACGGTCTACGATCTCTCTGAAAC
GGAAGAGACGCTAAACTCGCCTGATACCTTCTACTCGCCGCCTGCCTCGC
CGGGCCGTCTGTCGCGCAACCCATCCTTCTCGTACCATGATGACTGGGAG
ACATTTCCGCCTCTCGACCAACTGACGGTGTTCGACCTGCTTGATAACCT
CTCGCTGTCACAGAGGCTGGAAAGGCTGCAGCGGGCACTCAACGCGCAAA
AGGACAAAGTCAAGAGACAACGCGAGAAGCTCAAGTCCACTTCGATCAAC
GCGAAGGAACGTGTTGTGGGCGAATGGAAGAGACGGATTCCAACAGCCGA
TGAACAGCTAGACAAGTACCGCCGTCGCATGAAAGATGGCGTAGAACGAC
TGGGCAAACAATGGAACGCTACCGCAACCGTCACACTGCGTGAGAAAATC
TCCTTCATCGCTGGTGTCATGAACATCCTTGTGAGCGGCTACCTTCTTGG
AGGGTTCCCGGAATACTTCTACATTTGGTTCAGCGTGCAGTTGGCCTACT
TCATGCCTATCAGATACTACCGGTATCACAAAAAGGGCTATCATTATTTT
TTGGCTGATCTCTGCTACTTTGTGAATGTGCTCTGTATGCTTAGCCTCTG
GGTTTTCCCGGGGTCGAAGAGGCTGTTTATCAGCACCTTCTGCCTAGTAT
TCGGCAACAACGCCGTTGCAATTGCCATGTGGCGCAATTCGATGGTTTTC
CACAGTATGGACAAGGTGGTCAGTCTCTTTATCCACATCATGCCACCCGT
TTCCTTGCATTGTCTTGTCCATATGACGTCAGCGGAGACGCTGCGAGAAC
GATTCCCGGCAGTCTACGAGATCAAGTTCAGCGAACCGGGTTCGCCCAAT
CACTTCAACCTCCTGGAGATGATGGGTTGGGCAACCGTCCCTTACCTAAT
TTGGCAGTTGACGTATCACTGCTTTATCACTGTTCGTCGTGCCGAGAAAA
TTGCTGCAGGACGTCCGACCAGCTTCACTTGGCTCCGCAAGTCTTATGCC
AAGACCTGGATCGGCAAGGTCGTTTTGAGCCTGCCCGAATCGCTCCAAGC
TCCGGCTTTTATGATGATTCAGTATTTGTACGCGATATTGACCATGATTC
CCTGCCCTCTGTGGTTTTGGTCTCGGTGGGCGAGCGGTATTTTCCTCACC
GGTCTTTTCATTCTCAGCGTTCACAATGGCGCGACATACTATATTGACGT
CTTCGGCAAGCGCTTCCAGAAGGAATTGGAAGAGCTGAAGAGGGACGTCG
CTCGCTGGCAATCGTCCCCAGAAGGAGTCGCGAGCCCGACGCTTCTGTCT
TCTGACAATACTGCGACAGTCGGGGCCAAGGGCCTTGAGGAATCGGCTAG
TGGCGGATCCGACAAAGTCGGCGTTGACCAGATCCCTCTTCTTGATGCCC
AGTCGACTGGTGTAGAGAGCGGCCATGCCGCCGACAACTCTGGGGTCCGG
GAAAGGTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005633-T1.utr5p1 | KJC3_005633-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005633-T1.utr3p1 | KJC3_005633-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263JCT |
| DBxref | InterPro:IPR021261 |
| DBxref | PFAM:PF10998 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3277885..3280345 + |
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