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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3280461..3282775+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005634-T1 ID=KJC3_005634-T1|Name=KJC3_005634-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2315bp|location=Sequence derived from alignment at ch4:3280461..3282775+ (Aspergillus niger KJC3)
TACTTTTGTAATTTCCGATTCCTTTTTTATCTTTCTCCTCAGTGTGTCCC
ATTCAAAGTCACGTCCCGCATTTGGTTCCGTATTGTTGTGCATCCGTCTG
CATTCGCTCGATCTTCCGAGCATCTCGATCCCCTAGGTTTCCGCAATGTC
CGTTACAATGAGGTCAGCTAGCCTTGTGCGCGGCAATGCAGTATTGCGGC
CTAATATGCTCGGTAAGTTGACCTGGAATCACTCGTCTATCTGAGTCCCC
AGAAGGCTTCGACTTCAACTGCTCGATCGCTAACCCGATATTCGCATGCA
GCCCGGCAACGACTTTCCGGTGCCTTGGCTGCGTCTACGGCCGCAAACCT
CCGATTCAACGGCAGAGGTCTGCCATCCCAACTGTCGGCAATCGCCATTC
TAGTCCCTCAGCAGCGCGGATATGCCACTGATCCATCGACCTCTTCCTCC
TCTTCCTCAAATTCGTTCCCCCCTCCGGGCTTCAACGCAGAACAGGCCAA
GAAGCCCCTCCCCCCGGACACCGTGCAGCCCTCCAAGGATGTCCAGAAGG
TCACACCCAATTCTGGGCAGTCCATTTCGTCTCAAATTGCTGCGCAGAAC
AATGGAAAGTCGGCAGAGCTGACGACGGCAAAGTCCGCGGATCTTGATGG
CAAGAAGGAGGAAAAGAAGGAGACGAAGAAACTGACAATCGGACAAAAGA
TCAAGAAGGAAGCTCAGCACTACTGGGATGGTACCAAGCTTCTTGCTACG
GAAGTCAGAATCAGTTCCAGGCTGGCATTGAAGATGGCTGCAGGCTATGA
ACTCAGTCGCAGAGAGCACCGTCAGGTTAGTAAAGTCCGCATGGGATACG
CTTAATTGATCTTCGCTAATGATGTCTATGTGTGTAGCTCCAAAGAACCG
TCAAGGATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCATCCCC
TTCGCGGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAACATGCT
GCCTAGCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTGAGTC
TGAGCTCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACACTGAGG
GAGTCTGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAGTTTGC
CGAATTCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCCTGACG
ACGTGATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCGACAAC
CTGTCCCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTCAACTC
TTTCGGAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCATGCGCC
AGATTAAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGTCTCTG
TCTGTTCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGCACGCA
CGGTGTGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCTGGACC
TGCGTCTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCAACGCA
TACGTCTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAGATCGA
GGCTCTCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCACGAGA
TCGAGCTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGCAGCGT
CTGGAGGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAACGAGCA
GAACAGCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACATCGAGG
ATATCGATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGACGCAA
GCGGGTGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGGAGGC
ACAACAGTCTACCCAGGCTAAGGAAGAGAAGAAATAATCGCAACCTTCCT
TCTCTTTTTTCTTCGACAGGGCGTTTATACCGCGTTGATGAACCGTGACA
TAGATCTCTTTTCCCCTCTTGATCCCTACGCCTATACTCTCTACTTTCTC
TCCCTTTCTTTTTCTTCCCATGTGTTAGTGTGTATACGATAGACTCTGTT
CGCTTGTTTGTTTATTTATTCGTTTCATTCTTGTTTGTTTTCTGGGATCC
GTGGTTGGACACCATCGAGGTTGGATCTCTTATATCCTTTTAAACCAGTC
TTCTTTGTGACGTACCGATACTGAAATAGATACTTAGTCGACTTGGACGG
TTGATCTGGACAAAAATATGACATGGATATTAATTGATATTACCTTAATC
TTACCAAATATTCCT back to topCoding sequence (CDS) from alignment at ch4:3280461..3282775+ >KJC3_005634-T1 ID=KJC3_005634-T1|Name=KJC3_005634-T1|organism=Aspergillus niger KJC3|type=CDS|length=4923bp|location=Sequence derived from alignment at ch4:3280461..3282775+ (Aspergillus niger KJC3)
ATGTCCGTTACAATGAGGTCAGCTAGCCTTGTGCGCGGCAATGCAGTATT
GCGGCCTAATATGCTCGCCCGGCAACGACTTTCCGGTGCCTTGGCTGCGT
CTACGGCCGCAAACCTCCGATTCAACGGCAGAGGTCTGCCATCCCAACTG
TCGGCAATCGCCATTCTAGTCCCTCAGCAGCGCGGATATGCCACTGATCC
ATCGACCTCTTCCTCCTCTTCCTCAAATTCGTTCCCCCCTCCGGGCTTCA
ACGCAGAACAGGCCAAGAAGCCCCTCCCCCCGGACACCGTGCAGCCCTCC
AAGGATGTCCAGAAGGTCACACCCAATTCTGGGCAGTCCATTTCGTCTCA
AATTGCTGCGCAGAACAATGGAAAGTCGGCAGAGCTGACGACGGCAAAGT
CCGCGGATCTTGATGGCAAGAAGGAGGAAAAGAAGGAGACGAAGAAACTG
ACAATCGGACAAAAGATCAAGAAGGAAGCTCAGCACTACTGGGATGGTAC
CAAGCTTCTTGCTACGGAAGTCAGAATCAGTTCCAGGCTGGCATTGAAGA
TGGCTGCAGGCTATGAACTCAGTCGCAGAGAGCACCGTCAGCTCCAAAGA
ACCGTCAAGGATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCAT
CCCCTTCGCGGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAACA
TGCTGCCTAGCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTG
AGTCTGAGCTCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACACT
GAGGGAGTCTGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAGT
TTGCCGAATTCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCCT
GACGACGTGATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCGA
CAACCTGTCCCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTCA
ACTCTTTCGGAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCATG
CGCCAGATTAAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGTC
TCTGTCTGTTCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGCA
CGCACGGTGTGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCTG
GACCTGCGTCTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCAA
CGCATACGTCTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAGA
TCGAGGCTCTCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCAC
GAGATCGAGCTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGCA
GCGTCTGGAGGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAACG
AGCAGAACAGCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACATC
GAGGATATCGATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGAC
GCAAGCGGGTGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGG
AGGCACAACAGTCTACCCAGGCTAAGGAAGAGAAGAAATAAATGTCCGTT
ACAATGAGGTCAGCTAGCCTTGTGCGCGGCAATGCAGTATTGCGGCCTAA
TATGCTCGCCCGGCAACGACTTTCCGGTGCCTTGGCTGCGTCTACGGCCG
CAAACCTCCGATTCAACGGCAGAGGTCTGCCATCCCAACTGTCGGCAATC
GCCATTCTAGTCCCTCAGCAGCGCGGATATGCCACTGATCCATCGACCTC
TTCCTCCTCTTCCTCAAATTCGTTCCCCCCTCCGGGCTTCAACGCAGAAC
AGGCCAAGAAGCCCCTCCCCCCGGACACCGTGCAGCCCTCCAAGGATGTC
CAGAAGGTCACACCCAATTCTGGGCAGTCCATTTCGTCTCAAATTGCTGC
GCAGAACAATGGAAAGTCGGCAGAGCTGACGACGGCAAAGTCCGCGGATC
TTGATGGCAAGAAGGAGGAAAAGAAGGAGACGAAGAAACTGACAATCGGA
CAAAAGATCAAGAAGGAAGCTCAGCACTACTGGGATGGTACCAAGCTTCT
TGCTACGGAAGTCAGAATCAGTTCCAGGCTGGCATTGAAGATGGCTGCAG
GCTATGAACTCAGTCGCAGAGAGCACCGTCAGCTCCAAAGAACCGTCAAG
GATTTGGGTCGCCTTGTTCCTTTCTCCATGTTCGTTATCATCCCCTTCGC
GGAACTGCTGCTTCCCATTGCCCTGAAGCTGTTCCCGAACATGCTGCCTA
GCACCTACGAGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTGAGTCTGAGC
TCGACGCGTAAGGAGGTTTCGGGTTTCCTGAAGAACACACTGAGGGAGTC
TGGTCTCCCGGTCACTGCTGCGACCGTGAAGAACGAAGAGTTTGCCGAAT
TCTTCAAGAAGATCCGCACCACGGGAGAATCGCCCACTCCTGACGACGTG
ATCAAGGTGTGCAAGATCTTCAAGGATGACCTGACGCTCGACAACCTGTC
CCGGCCCCAGCTGGTGGGTATCTGCAAGTACATGAACCTCAACTCTTTCG
GAACGGACGCCATGCTTCGGTACAACATCCGCCACCGCATGCGCCAGATT
AAGCGCGACGACCGCGCCATTTTCCACGAGGGTGTGGAGTCTCTGTCTGT
TCCTGAACTGCAGATGGCATGTGCCTCCCGTGGTATCCGCACGCACGGTG
TGTCTCCTGCTCGCCTGCGCGAGGACATGTCGATGTGGCTGGACCTGCGT
CTCAAGCAGGGCGTCCCCTCGACCCTTCTTGTGCTGAGCAACGCATACGT
CTACGCCCAGGGTGGCAAGGAAGCCGAGATGTCGTCCCAGATCGAGGCTC
TCCAGTCCGTCTTGTCTAGCATTCCTGAGGAGCTCTTCCACGAGATCGAG
CTCGAGGTTCACAACGCCGAAGGTGCCGCCACCAACAAGCAGCGTCTGGA
GGTCATCAAGGAGCAGCAAGAGCTGATCGAGGAGGAGAACGAGCAGAACA
GCGAGAACGAGGAGAAGGGCGTCTCTGCCCCCAAGGACATCGAGGATATC
GATGACAAGGATGACGTCAAGTACGAAGCCAAGTACAAGACGCAAGCGGG
TGAGGCCAACGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGGAGGCACAAC
AGTCTACCCAGGCTAAGGAAGAGAAGAAATAAATGTCCGTTACAATGAGG
TCAGCTAGCCTTGTGCGCGGCAATGCAGTATTGCGGCCTAATATGCTCGC
CCGGCAACGACTTTCCGGTGCCTTGGCTGCGTCTACGGCCGCAAACCTCC
GATTCAACGGCAGAGGTCTGCCATCCCAACTGTCGGCAATCGCCATTCTA
GTCCCTCAGCAGCGCGGATATGCCACTGATCCATCGACCTCTTCCTCCTC
TTCCTCAAATTCGTTCCCCCCTCCGGGCTTCAACGCAGAACAGGCCAAGA
AGCCCCTCCCCCCGGACACCGTGCAGCCCTCCAAGGATGTCCAGAAGGTC
ACACCCAATTCTGGGCAGTCCATTTCGTCTCAAATTGCTGCGCAGAACAA
TGGAAAGTCGGCAGAGCTGACGACGGCAAAGTCCGCGGATCTTGATGGCA
AGAAGGAGGAAAAGAAGGAGACGAAGAAACTGACAATCGGACAAAAGATC
AAGAAGGAAGCTCAGCACTACTGGGATGGTACCAAGCTTCTTGCTACGGA
AGTCAGAATCAGTTCCAGGCTGGCATTGAAGATGGCTGCAGGCTATGAAC
TCAGTCGCAGAGAGCACCGTCAGCTCCAAAGAACCGTCAAGGATTTGGGT
CGCCTTGTTCCTTTCTCCATGTTCGTTATCATCCCCTTCGCGGAACTGCT
GCTTCCCATTGCCCTGAAGCTGTTCCCGAACATGCTGCCTAGCACCTACG
AGGGCCAGAAGGCGCGCGAGAAGAAGGCGCTGAGTCTGAGCTCGACGCGT
AAGGAGGTTTCGGGTTTCCTGAAGAACACACTGAGGGAGTCTGGTCTCCC
GGTCACTGCTGCGACCGTGAAGAACGAAGAGTTTGCCGAATTCTTCAAGA
AGATCCGCACCACGGGAGAATCGCCCACTCCTGACGACGTGATCAAGGTG
TGCAAGATCTTCAAGGATGACCTGACGCTCGACAACCTGTCCCGGCCCCA
GCTGGTGGGTATCTGCAAGTACATGAACCTCAACTCTTTCGGAACGGACG
CCATGCTTCGGTACAACATCCGCCACCGCATGCGCCAGATTAAGCGCGAC
GACCGCGCCATTTTCCACGAGGGTGTGGAGTCTCTGTCTGTTCCTGAACT
GCAGATGGCATGTGCCTCCCGTGGTATCCGCACGCACGGTGTGTCTCCTG
CTCGCCTGCGCGAGGACATGTCGATGTGGCTGGACCTGCGTCTCAAGCAG
GGCGTCCCCTCGACCCTTCTTGTGCTGAGCAACGCATACGTCTACGCCCA
GGGTGGCAAGGAAGCCGAGATGTCGTCCCAGATCGAGGCTCTCCAGTCCG
TCTTGTCTAGCATTCCTGAGGAGCTCTTCCACGAGATCGAGCTCGAGGTT
CACAACGCCGAAGGTGCCGCCACCAACAAGCAGCGTCTGGAGGTCATCAA
GGAGCAGCAAGAGCTGATCGAGGAGGAGAACGAGCAGAACAGCGAGAACG
AGGAGAAGGGCGTCTCTGCCCCCAAGGACATCGAGGATATCGATGACAAG
GATGACGTCAAGTACGAAGCCAAGTACAAGACGCAAGCGGGTGAGGCCAA
CGAAGCCGTCCAGGAGGGCGAGAAAGCTGAGGAGGCACAACAGTCTACCC
AGGCTAAGGAAGAGAAGAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043022 | ribosome binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005634-T1.utr5p1 | KJC3_005634-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005634-T1.utr3p1 | KJC3_005634-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033122 |
| DBxref | InterPro:IPR011685 |
| DBxref | PFAM:PF07766 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3280461..3282775 + |
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