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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3291961..3293605- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005637-T1 ID=KJC3_005637-T1|Name=KJC3_005637-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1645bp|location=Sequence derived from alignment at ch4:3291961..3293605- (Aspergillus niger KJC3)
TGCAGAGAACCTCACAGAAATTAAACTCGGTGACATCGACTTCCTAAAGG
AGGAAACAAATCCCACCACCGCCATCGGACTATCACCTAGCTTTTTCCTC
GGGGGTTGCAGGCGTGTGCCTCGATTTGTAATCCCCCATCATCAGATAAC
CCCAAAAATTCGCTGATAACTGTCAAACACAATCTCTGCCACTTTCCCCG
CCACCCAATCACAACGCCGTCAGATGACAATTGAGTCAGCCAGACGAAAC
CCAAAACGAGCATCCGATCACGGCCACTGATCACTTTTGAACCTCAAGTT
TCACTTCCTTCTATTTATTTCCCAACTATCTCCTCTCCCTTCTCCCTCCA
CCGACGAATTCGCAGGTAGACCGACACAATGGCTCCCTCGTTCGTAACCA
TCGACACAACGCCTGATTTCGACATGGCACCCGCCCCCTCCTTCCAGCCC
ATGTCGACCGGCAGCCCCTCCAAGCGCACTCTCCTCCTCGCGCCCCCCTC
CATCGCCACCCAAGAAGAGAAGCTTCGGGACCTCTTCACTGCCTTTGACC
GCTCCACAACCGATCTGCAGATGCTTGACCGCATATCTGCCGGCTTCGTC
TCCCTGCCCGCCAACACCTACGATCACATTCTTGTCCTAACCGATACCGA
TGGCACGCGGCGGTCGGAGGCCCTCCACCTGCTCACGCGGGATGTCTACA
CCGCGTTGGTTCCCTGCATGAAGGCCGGAGCGAAGCTACAGACTCAGGAT
AACTTTTTCGGAGAGGCTGAGGAGCGCGAGGCGGTCCTGGCGGGTCTGAT
CAAGACCGATGCCGGATTTGAGAAGATGGATCAACCCAAGTCGTTCGCAA
TTCCTCTGCGACGCAATGGGAAGAAGAAGGATGCTGCGAAGACAGAGACA
TTTGCTCCTGCTCCTGCTCCTGCCCCGCCCGTGCAGCCTGTCACCGTGGG
CATGATTAATAATGACGACGATTACGAGAACGATGATGATCTGATTGACG
AGGATACACTGCTGTCGGATGAGGATCTGAAGAGACCTATTCAACGTGAG
TTTCATTCCAAAATTTTTTCTAGAAAAAAATTGTCATGAAATCGGAGCCA
TGCTAACAATGCATGCATACACAGCTCCCGAATGCCAGCCCAAGCCCGGC
CGCCGGCGTCGCGCCTGCAAGGACTGCACGTGCGGACTCGCAGCACGACT
CGAGGCAGAGGAGCAAGCAGAGCGAGAGAAGGCAGACAAGGCTCTGAACG
TGATGAAGCTGGAGACGGAGGACTTGAACGAGCTGGACTTTACCGTGCAA
GGCAAGACAGGCTCGTGTGGAAACTGCGCCCTGGGTGATGCCTTCCGGTG
CGCGGGCTGTCCGTTCATCGGACTGCCGGCATTCAAGCCGGGCCAGGAGG
TGCAGATCCTGGAAAATGTTGCGCAGTTGTGAAAGTTTTCTTTTCAGTTA
TTGGTCAGGTCGGGTCTCTATCTTTTCGGTTCCTTGTGGGTTGGATCGGT
TGGTTTGCTTGGACAGGCGATGGTTGGGCGCAGGATAAAATAGAATACCT
TATCTTAGTTTAGCCTTTTTATTTATCATGACCTAGCTCTATGGAGTACA
TAGGGTTGCATTTAGGAATATCAATGACCTACTAATCGTTCGTTC back to topCoding sequence (CDS) from alignment at ch4:3291961..3293605- >KJC3_005637-T1 ID=KJC3_005637-T1|Name=KJC3_005637-T1|organism=Aspergillus niger KJC3|type=CDS|length=1950bp|location=Sequence derived from alignment at ch4:3291961..3293605- (Aspergillus niger KJC3)
CTCCCGAATGCCAGCCCAAGCCCGGCCGCCGGCGTCGCGCCTGCAAGGAC
TGCACGTGCGGACTCGCAGCACGACTCGAGGCAGAGGAGCAAGCAGAGCG
AGAGAAGGCAGACAAGGCTCTGAACGTGATGAAGCTGGAGACGGAGGACT
TGAACGAGCTGGACTTTACCGTGCAAGGCAAGACAGGCTCGTGTGGAAAC
TGCGCCCTGGGTGATGCCTTCCGGTGCGCGGGCTGTCCGTTCATCGGACT
GCCGGCATTCAAGCCGGGCCAGGAGGTGCAGATCCTGGAAAATGTTGCGC
AGTTGTGAATGGCTCCCTCGTTCGTAACCATCGACACAACGCCTGATTTC
GACATGGCACCCGCCCCCTCCTTCCAGCCCATGTCGACCGGCAGCCCCTC
CAAGCGCACTCTCCTCCTCGCGCCCCCCTCCATCGCCACCCAAGAAGAGA
AGCTTCGGGACCTCTTCACTGCCTTTGACCGCTCCACAACCGATCTGCAG
ATGCTTGACCGCATATCTGCCGGCTTCGTCTCCCTGCCCGCCAACACCTA
CGATCACATTCTTGTCCTAACCGATACCGATGGCACGCGGCGGTCGGAGG
CCCTCCACCTGCTCACGCGGGATGTCTACACCGCGTTGGTTCCCTGCATG
AAGGCCGGAGCGAAGCTACAGACTCAGGATAACTTTTTCGGAGAGGCTGA
GGAGCGCGAGGCGGTCCTGGCGGGTCTGATCAAGACCGATGCCGGATTTG
AGAAGATGGATCAACCCAAGTCGTTCGCAATTCCTCTGCGACGCAATGGG
AAGAAGAAGGATGCTGCGAAGACAGAGACATTTGCTCCTGCTCCTGCTCC
TGCCCCGCCCGTGCAGCCTGTCACCGTGGGCATGATTAATAATGACGACG
ATTACGAGAACGATGATGATCTGATTGACGAGGATACACTGCTGTCGGAT
GAGGATCTGAAGAGACCTATTCAACCTCCCGAATGCCAGCCCAAGCCCGG
CCGCCGGCGTCGCGCCTGCAAGGACTGCACGTGCGGACTCGCAGCACGAC
TCGAGGCAGAGGAGCAAGCAGAGCGAGAGAAGGCAGACAAGGCTCTGAAC
GTGATGAAGCTGGAGACGGAGGACTTGAACGAGCTGGACTTTACCGTGCA
AGGCAAGACAGGCTCGTGTGGAAACTGCGCCCTGGGTGATGCCTTCCGGT
GCGCGGGCTGTCCGTTCATCGGACTGCCGGCATTCAAGCCGGGCCAGGAG
GTGCAGATCCTGGAAAATGTTGCGCAGTTGTGAATGGCTCCCTCGTTCGT
AACCATCGACACAACGCCTGATTTCGACATGGCACCCGCCCCCTCCTTCC
AGCCCATGTCGACCGGCAGCCCCTCCAAGCGCACTCTCCTCCTCGCGCCC
CCCTCCATCGCCACCCAAGAAGAGAAGCTTCGGGACCTCTTCACTGCCTT
TGACCGCTCCACAACCGATCTGCAGATGCTTGACCGCATATCTGCCGGCT
TCGTCTCCCTGCCCGCCAACACCTACGATCACATTCTTGTCCTAACCGAT
ACCGATGGCACGCGGCGGTCGGAGGCCCTCCACCTGCTCACGCGGGATGT
CTACACCGCGTTGGTTCCCTGCATGAAGGCCGGAGCGAAGCTACAGACTC
AGGATAACTTTTTCGGAGAGGCTGAGGAGCGCGAGGCGGTCCTGGCGGGT
CTGATCAAGACCGATGCCGGATTTGAGAAGATGGATCAACCCAAGTCGTT
CGCAATTCCTCTGCGACGCAATGGGAAGAAGAAGGATGCTGCGAAGACAG
AGACATTTGCTCCTGCTCCTGCTCCTGCCCCGCCCGTGCAGCCTGTCACC
GTGGGCATGATTAATAATGACGACGATTACGAGAACGATGATGATCTGAT
TGACGAGGATACACTGCTGTCGGATGAGGATCTGAAGAGACCTATTCAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051536 | iron-sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005637-T1.utr3p1 | KJC3_005637-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005637-T1.utr5p1 | KJC3_005637-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265040 |
| DBxref | InterPro:IPR007785 |
| DBxref | InterPro:IPR031838 |
| DBxref | PFAM:PF16803 |
| DBxref | PFAM:PF05093 |
| Product | electron carrier |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3291961..3293605 - |
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