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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3299228..3300397- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005639-T1 ID=KJC3_005639-T1|Name=KJC3_005639-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1170bp|location=Sequence derived from alignment at ch4:3299228..3300397- (Aspergillus niger KJC3)
CGATAAGATCTGGCGGCGATCATCATCCAATCCATTCACTTCACACTTCT
CTTCCGCTTCTAGATAGATCGCGACAACCACCTCCACCACTGACTGCAGC
TCCCTCAATGCGCGCTCGCATCTAACCCAAACAAACCTCCCATCTCAATT
TCCACATAGCCTACACTTCCTCGCGACCGCAAGTCGTCGCCCACCACCAC
AATGGCCGAACCCGCCGCTGCAACCCCGGCCGCATCAACCGCCCCAGCAC
CAGCAACAACCACCACCAGCACAGCAGGCCCAACTTCCACCACGACCACC
AACTCCACAGCACCCAATCCCACGCCAAACAACAGCAATGCCAACAACAA
CTCCAACAACACAACATCAACCAGCACCTCCAACCCCAACCCCAACCAAT
CCGCTGACTCCTCCGCTTCGTCTACCGCGAACCGCGGCCTTCCCTACTAC
GAGAAACTCCGCCGCGAACTCCGCGATACTCTCCAGAAGAAGCGTCTAAT
GGACAAGAGCATGGTACGCCCCCACACCCTTCACCGAGACCAGAACAAAA
GGCCCAATCTAACAATTACGCATAGGCCCAACTTGAAGATCAAATCTACC
GTTTCGAACAATCCTACCTCGAAGAAACCACCGCCGGAAACATTATCAAA
GGCTTCGACAACTATATCAAGGGCTCATCCAGCGGCGCAGGGATCGGCGG
AGCAGGCATTGCACTCTCCTCAAGTATGAGTGGTGGTGGAGGTGCAGCAA
GACGAAAGGCGACGGTGTCGGACGCGGATCGTGTGTTTTCGAGGAGTTCG
GCGAGTTTTATGCGGGTATGCACCCCCTTGAAAACTTCATATCCACCCTC
CGTCTTTGTTTGGCTGTGTGGTATTCTTGGACGTGTGTAAAGCTGACGAA
CTGTGTTTTTGTGATTAGGATTCACCTGCACCTTCATCGGCTCAAACGAC
GCCGTCGCATGCCGCGACTCCGAACTCGACGTATAATGGGTCTACCGGCA
AGCCTGGGAACGGGGATGCGTCGTCTGCGGCGAATAGTGTGAAGGGGGGA
CAGGCGTCGAAGAATAAGAAGAAGTCTGCGGCGAGTAACAAGGACAAGGG
GGATGATGATGGGACAGATGGGGATAGGCCGCCTACGAAGAGGTTGAAGA
TTACTTATGGGAGGGATTGA back to topCoding sequence (CDS) from alignment at ch4:3299228..3300397- >KJC3_005639-T1 ID=KJC3_005639-T1|Name=KJC3_005639-T1|organism=Aspergillus niger KJC3|type=CDS|length=2412bp|location=Sequence derived from alignment at ch4:3299228..3300397- (Aspergillus niger KJC3)
GATTCACCTGCACCTTCATCGGCTCAAACGACGCCGTCGCATGCCGCGAC
TCCGAACTCGACGTATAATGGGTCTACCGGCAAGCCTGGGAACGGGGATG
CGTCGTCTGCGGCGAATAGTGTGAAGGGGGGACAGGCGTCGAAGAATAAG
AAGAAGTCTGCGGCGAGTAACAAGGACAAGGGGGATGATGATGGGACAGA
TGGGGATAGGCCGCCTACGAAGAGGTTGAAGATTACTTATGGGAGGGATT
GAGCCCAACTTGAAGATCAAATCTACCGTTTCGAACAATCCTACCTCGAA
GAAACCACCGCCGGAAACATTATCAAAGGCTTCGACAACTATATCAAGGG
CTCATCCAGCGGCGCAGGGATCGGCGGAGCAGGCATTGCACTCTCCTCAA
GTATGAGTGGTGGTGGAGGTGCAGCAAGACGAAAGGCGACGGTGTCGGAC
GCGGATCGTGTGTTTTCGAGGAGTTCGGCGAGTTTTATGCGGATGGCCGA
ACCCGCCGCTGCAACCCCGGCCGCATCAACCGCCCCAGCACCAGCAACAA
CCACCACCAGCACAGCAGGCCCAACTTCCACCACGACCACCAACTCCACA
GCACCCAATCCCACGCCAAACAACAGCAATGCCAACAACAACTCCAACAA
CACAACATCAACCAGCACCTCCAACCCCAACCCCAACCAATCCGCTGACT
CCTCCGCTTCGTCTACCGCGAACCGCGGCCTTCCCTACTACGAGAAACTC
CGCCGCGAACTCCGCGATACTCTCCAGAAGAAGCGTCTAATGGACAAGAG
CATGGATTCACCTGCACCTTCATCGGCTCAAACGACGCCGTCGCATGCCG
CGACTCCGAACTCGACGTATAATGGGTCTACCGGCAAGCCTGGGAACGGG
GATGCGTCGTCTGCGGCGAATAGTGTGAAGGGGGGACAGGCGTCGAAGAA
TAAGAAGAAGTCTGCGGCGAGTAACAAGGACAAGGGGGATGATGATGGGA
CAGATGGGGATAGGCCGCCTACGAAGAGGTTGAAGATTACTTATGGGAGG
GATTGAGCCCAACTTGAAGATCAAATCTACCGTTTCGAACAATCCTACCT
CGAAGAAACCACCGCCGGAAACATTATCAAAGGCTTCGACAACTATATCA
AGGGCTCATCCAGCGGCGCAGGGATCGGCGGAGCAGGCATTGCACTCTCC
TCAAGTATGAGTGGTGGTGGAGGTGCAGCAAGACGAAAGGCGACGGTGTC
GGACGCGGATCGTGTGTTTTCGAGGAGTTCGGCGAGTTTTATGCGGATGG
CCGAACCCGCCGCTGCAACCCCGGCCGCATCAACCGCCCCAGCACCAGCA
ACAACCACCACCAGCACAGCAGGCCCAACTTCCACCACGACCACCAACTC
CACAGCACCCAATCCCACGCCAAACAACAGCAATGCCAACAACAACTCCA
ACAACACAACATCAACCAGCACCTCCAACCCCAACCCCAACCAATCCGCT
GACTCCTCCGCTTCGTCTACCGCGAACCGCGGCCTTCCCTACTACGAGAA
ACTCCGCCGCGAACTCCGCGATACTCTCCAGAAGAAGCGTCTAATGGACA
AGAGCATGGATTCACCTGCACCTTCATCGGCTCAAACGACGCCGTCGCAT
GCCGCGACTCCGAACTCGACGTATAATGGGTCTACCGGCAAGCCTGGGAA
CGGGGATGCGTCGTCTGCGGCGAATAGTGTGAAGGGGGGACAGGCGTCGA
AGAATAAGAAGAAGTCTGCGGCGAGTAACAAGGACAAGGGGGATGATGAT
GGGACAGATGGGGATAGGCCGCCTACGAAGAGGTTGAAGATTACTTATGG
GAGGGATTGAGCCCAACTTGAAGATCAAATCTACCGTTTCGAACAATCCT
ACCTCGAAGAAACCACCGCCGGAAACATTATCAAAGGCTTCGACAACTAT
ATCAAGGGCTCATCCAGCGGCGCAGGGATCGGCGGAGCAGGCATTGCACT
CTCCTCAAGTATGAGTGGTGGTGGAGGTGCAGCAAGACGAAAGGCGACGG
TGTCGGACGCGGATCGTGTGTTTTCGAGGAGTTCGGCGAGTTTTATGCGG
ATGGCCGAACCCGCCGCTGCAACCCCGGCCGCATCAACCGCCCCAGCACC
AGCAACAACCACCACCAGCACAGCAGGCCCAACTTCCACCACGACCACCA
ACTCCACAGCACCCAATCCCACGCCAAACAACAGCAATGCCAACAACAAC
TCCAACAACACAACATCAACCAGCACCTCCAACCCCAACCCCAACCAATC
CGCTGACTCCTCCGCTTCGTCTACCGCGAACCGCGGCCTTCCCTACTACG
AGAAACTCCGCCGCGAACTCCGCGATACTCTCCAGAAGAAGCGTCTAATG
GACAAGAGCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000123 | histone acetyltransferase complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016573 | histone acetylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005639-T1.utr5p1 | KJC3_005639-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092658WS |
| DBxref | InterPro:IPR015418 |
| DBxref | PFAM:PF09340 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3299228..3300397 - |
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