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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3313336..3315619+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005647-T1 ID=KJC3_005647-T1|Name=KJC3_005647-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2284bp|location=Sequence derived from alignment at ch4:3313336..3315619+ (Aspergillus niger KJC3)
ACCCAAACCGCAGTCTCGTGGCTGGCTCATCACCGCAGCTGTTCACGCGC
CGGTCGCTGCACATATTGTCGACTCCTCAATAGCTGTTGGTTCTCTCGGA
CTAGGACTAGAAACCATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCA
GACCAAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGACCAAGGTCA
ACATCGAGGTGATGAAGAAGTGCGTTGCAAAAGCCCCAGCTAAGTTTCTT
ATCGCGAGGTGCTGTTATCATCCGGATCTGGAACTAACATTTTGACTATT
GCAGATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGAC
GTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTGTATG
TACGACCTTTTACCTTTTGCCTTTAATGCTGATTTGCTATGTTTTACTCG
GGGTTCAGCCATTCAAGCTAACTGGTTTCACTTTGCATTATCTCAGCCCG
ATATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGATAAAGATACT
GGCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAA
CCCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTA
TCCAAGAGAAGGTGGGATGCCTCGCGGATGTCTGGGTTGTTGGTCGCATG
CTGACGCCTTCGTTATTTAGATCGAAGCGGAAAGAGCCGCCGAGGAAGCC
CGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACCT
TCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGTG
GTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACGC
AGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCTA
CGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGCC
GCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCGG
CGCCATCCTGGCAACGACCGGAACCGACGACGTCGGTCGATTAGCGGCTC
TGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCTG
ATTACGGTGATCGTGCAAGATCCATTACCCGCAGTGAATCATCACGCTCA
CGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCAG
TGCATCGCGTTCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCTT
CAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCACC
AGACGCAGAGGATCATCGCCTCACTCTTCACGAGATGATAAGAAAGAATC
CACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTGA
GTCGCAGCAGAGATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCAG
AGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGGA
CTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGGA
AGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCGC
AACACGTCCTCCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTGA
TGAAGACGAGGATGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCGA
GCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGGTGGGTGAATGATTT
CTGAGGGTCCTCTTCACACAAATTCTATGATTTCCTAAGTTCGTTCAACG
CCCAAACAAACCCTGCATTGCTCCTCTCACCGTACAGACCTAAACTAACC
ACCTGATCGCAGACTGCTGCTCCCTCCAATAACCCAGCTCGTGTACGCAT
CTCCAGCTCCGAACTACGCGAGAAGCTGCTCCGCGAGAAGATCATCGCGA
TGCGCCGGACCGCCTCGAGCGACAAGGTAGGTAGCTCTGCATCTTCAAGG
TAGTCTACATGCCCTACCATTCAGGGCGCACACACACACACACAGCTTCA
CCTACATAAACCCACATACCAAAGTCCCACTAAAAGAGCGAAGGATTGGA
GGATTCCGCAACTCAATACTTAGCGATCTATGCACACGTGGTAATGTCAC
TATAAACAATAAACAAAAAGAGAGTTTGCATCCTATGCCTGTCTCAGCAA
TATCTCCGTCAATAGTCCATCCAACCCCTGTGCC back to topCoding sequence (CDS) from alignment at ch4:3313336..3315619+ >KJC3_005647-T1 ID=KJC3_005647-T1|Name=KJC3_005647-T1|organism=Aspergillus niger KJC3|type=CDS|length=5748bp|location=Sequence derived from alignment at ch4:3313336..3315619+ (Aspergillus niger KJC3)
ATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCAGACCAAATTCCCTCC
GGAATTCAGCCGGAAGGTGGATATGACCAAGGTCAACATCGAGGTGATGA
AGAAATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGAC
GTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTCCCGA
TATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGATAAAGATACTG
GCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAAC
CCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTAT
CCAAGAGAAGATCGAAGCGGAAAGAGCCGCCGAGGAAGCCCGCAAACAGA
AGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACCTTCGACGCAGA
GAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGTGGTCGCGGTGG
TCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACGCAGCCGTGACC
GTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCTACGTGCCCTCA
GGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGCCGCTCTCGTTC
TCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCGGCGCCATCCTG
GCAACGACCGGAACCGACGACGTCGGTCGATTAGCGGCTCTGTCTCCCCG
GACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCTGATTACGGTGA
TCGTGCAAGATCCATTACCCGCAGTGAATCATCACGCTCACGTAGTCCCA
GAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCAGTGCATCGCGT
TCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCTTCAGCATCGAG
GTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCACCAGACGCAGAG
GATCATCGCCTCACTCTTCACGAGATGATAAGAAAGAATCCACCGCTGAT
ATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTGAGTCGCAGCAG
AGATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCAGAGTGTTAGCC
GCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGGACTCCCGCAGT
CGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGGAAGCGGCGTCG
GTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCGCAACACGTCCT
CCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTGATGAAGACGAG
GATGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCGAGCTCGAGCGA
CCAAGAGATGAAGGATGCCACTGAGGTGGGTGAATGAATGGCGACGAGTG
TGGATGCCAAACTGCTGAAGCAGACCAAATTCCCTCCGGAATTCAGCCGG
AAGGTGGATATGACCAAGGTCAACATCGAGGTGATGAAGAAATGGATTGC
TGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGACGTCGTTATTGAGC
TCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTCCCGATATCAAGTCCCTG
CAGATTCAGCTCACCGGATTCCTGGATAAAGATACTGGCAAGTTTTGCAA
AGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAACCCCCAGGGCGTGC
CCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTATCCAAGAGAAGATC
GAAGCGGAAAGAGCCGCCGAGGAAGCCCGCAAACAGAAGGAACAGGAGCG
CGCACGAGAACGAGAACTTGAAGACCTTCGACGCAGAGAACGGTCTGAGC
GCACAAGGGGAGGAAGAAGAGGCGGTGGTCGCGGTGGTCGAGACTTTGAT
AGGCGTCGGTCGCCTCCGCGACAACGCAGCCGTGACCGTTTTCGAGGTCC
GCCTGGCAGACGAGAGTTCGATTCCTACGTGCCCTCAGGCTCTCGTCGAG
GCCGTCGGCCATCCCGTTCGCCCAGCCGCTCTCGTTCTCGCTCCGTGTCT
TCCTCGCGCTCACCCCCACCACGTCGGCGCCATCCTGGCAACGACCGGAA
CCGACGACGTCGGTCGATTAGCGGCTCTGTCTCCCCGGACCGCGGTGATC
GCAGGAGGCCCAGGAGACGCAGCCCTGATTACGGTGATCGTGCAAGATCC
ATTACCCGCAGTGAATCATCACGCTCACGTAGTCCCAGAAGAGACCGACG
GAGACGGAGATCCGTTTCTTCCCGCAGTGCATCGCGTTCACCTGTCTACA
GGGATCGACGCAAGAGGAGAGGTTCTTCAGCATCGAGGTCCCGTTCGAGG
TCGCAAGGGTCGGATGGTAGCGGCACCAGACGCAGAGGATCATCGCCTCA
CTCTTCACGAGATGATAAGAAAGAATCCACCGCTGATATTGCAAAGGCCC
GCAAGTCCCGTGACGACCGCCGTTTGAGTCGCAGCAGAGATCGCAATGAC
ACCCGCAGACGCCGGTACTCGTCCCAGAGTGTTAGCCGCAGCCGCAGTCG
AGGTCGCTCCCGCAGCGCCAGCCAGGACTCCCGCAGTCGGAGTCGCAGCC
GCAGCCACAGCCGCATGAGAGATAGGAAGCGGCGTCGGTCCATTGAGAGA
TATGCCCCAGTTGCGCGGAGACGGCGCAACACGTCCTCCGTATCCGTCCC
CAGTGATAAACGAAAGAGGATGGCTGATGAAGACGAGGATGCCGCCAAAC
GATCACCACCGCAGGCTGAGAAGCCGAGCTCGAGCGACCAAGAGATGAAG
GATGCCACTGAGGTGGGTGAATGAATGGCGACGAGTGTGGATGCCAAACT
GCTGAAGCAGACCAAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGA
CCAAGGTCAACATCGAGGTGATGAAGAAATGGATTGCTGGGAAGATCTCC
GAGATTCTGGGAAATGAAGATGACGTCGTTATTGAGCTCTGCTTTAACCT
TTTGGAAGGGTCGCGGTTTCCCGATATCAAGTCCCTGCAGATTCAGCTCA
CCGGATTCCTGGATAAAGATACTGGCAAGTTTTGCAAAGAGCTGTGGTCG
CTATGCTTGAGTGCCCAGGAAAACCCCCAGGGCGTGCCCAAGGAGTTGCT
GGAGGCGAAGAAACTGGAGCTTATCCAAGAGAAGATCGAAGCGGAAAGAG
CCGCCGAGGAAGCCCGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGA
GAACTTGAAGACCTTCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGG
AAGAAGAGGCGGTGGTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGC
CTCCGCGACAACGCAGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGA
GAGTTCGATTCCTACGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATC
CCGTTCGCCCAGCCGCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCAC
CCCCACCACGTCGGCGCCATCCTGGCAACGACCGGAACCGACGACGTCGG
TCGATTAGCGGCTCTGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAG
GAGACGCAGCCCTGATTACGGTGATCGTGCAAGATCCATTACCCGCAGTG
AATCATCACGCTCACGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCC
GTTTCTTCCCGCAGTGCATCGCGTTCACCTGTCTACAGGGATCGACGCAA
GAGGAGAGGTTCTTCAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGG
ATGGTAGCGGCACCAGACGCAGAGGATCATCGCCTCACTCTTCACGAGAT
GATAAGAAAGAATCCACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGA
CGACCGCCGTTTGAGTCGCAGCAGAGATCGCAATGACACCCGCAGACGCC
GGTACTCGTCCCAGAGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGC
AGCGCCAGCCAGGACTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCG
CATGAGAGATAGGAAGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTG
CGCGGAGACGGCGCAACACGTCCTCCGTATCCGTCCCCAGTGATAAACGA
AAGAGGATGGCTGATGAAGACGAGGATGCCGCCAAACGATCACCACCGCA
GGCTGAGAAGCCGAGCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGG
TGGGTGAATGAATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCAGACC
AAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGACCAAGGTCAACAT
CGAGGTGATGAAGAAATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAA
ATGAAGATGACGTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCG
CGGTTTCCCGATATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGA
TAAAGATACTGGCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTG
CCCAGGAAAACCCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAA
CTGGAGCTTATCCAAGAGAAGATCGAAGCGGAAAGAGCCGCCGAGGAAGC
CCGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACC
TTCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGT
GGTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACG
CAGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCT
ACGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGC
CGCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCG
GCGCCATCCTGGCAACGACCGGAACCGACGACGTCGGTCGATTAGCGGCT
CTGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCT
GATTACGGTGATCGTGCAAGATCCATTACCCGCAGTGAATCATCACGCTC
ACGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCA
GTGCATCGCGTTCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCT
TCAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCAC
CAGACGCAGAGGATCATCGCCTCACTCTTCACGAGATGATAAGAAAGAAT
CCACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTG
AGTCGCAGCAGAGATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCA
GAGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGG
ACTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGG
AAGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCG
CAACACGTCCTCCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTG
ATGAAGACGAGGATGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCG
AGCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGGTGGGTGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005647-T1.utr5p1 | KJC3_005647-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036483 |
| DBxref | InterPro:IPR002483 |
| DBxref | PFAM:PF01480 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3313336..3315619 + |
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