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KJC3_005650-T1, KJC3_005650-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005650-T1
Unique NameKJC3_005650-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3329512..3331016-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005650-T1 ID=KJC3_005650-T1|Name=KJC3_005650-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1505bp|location=Sequence derived from alignment at ch4:3329512..3331016- (Aspergillus niger KJC3)
GCATCGAACTTTTTTGTCTTGTCCTTCCACTTCGGGCTTCCGCCGTTGTT
TGATATCAATTTGTTTTTGACTCGCTTCTTCGCGGTTGATTCATCATGGT
ATGTTGAGATGCGTTTGGAATCTATGGTATTCGGATTGCTAACTGATTGT
TCCGTGTGCAGCCTCAGAACGAGTTCGTCTCCCCCACCCACGCCCCAAAG
CTGGGCCCCGACCCGAGCTGTTTTTCCACCGCCGGGGAATCGATATGTCG
AAGCCACGAACAAAGTATGCTGACGAGGGATTAGGTATATCGAACGCTGG
CAGAAGCAGCACGGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAAGCG
CCAGGCCCGTGAATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGCGCG
GCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATCCAG
ATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTCCGC
TCCCGATGAGCCATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATCGGT
CCCAGGCCACCAACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAGCGG
AATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGGTAT
CAGTGAGGAGGAGATGTTCAAGGTCGTCAACACCGGAAAGAAGACCCACA
AGAAGTCCTGGAAGCGCATGATCACCAAGCCTACTTTCGTTGGTAGTGAC
TTCACCAGACGCCCTGTCAAGTACGAACGGTTCATTCGTCCTATGGGTCT
GCGTTACAAGAAGGCCAACGTTACGCAGTATGATTTATCACCTTTCCCCT
CATTCTGTCTGGTATGGGAGTCGATTAACTGACGTAATGGCTTTTTCTCT
TTCCAGCCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTCA
AGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTTGACCAAG
GGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCACCACCAG
CGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAACCCTGACA
TGGACGGCACGGTCAAGTGAGTTATCTCTTTACACTTCATACAATCTCCC
ATAATACTAACATTGTATAATCACAGCGCTGTCCTCCTTGTCTAAACACC
TTCTCTCATCCATGATTATGAATCCCGCCCTATTCCTTCATATCATCATA
CCATATCCCTCCCTATCTCAAAATATGCCCTGGTTGCGTTGGTTTGTGTT
CGTCTTCACATAGACTATATCAGTGGGTGTGGCGTTAGCGGCGCGCGAAG
TATCCGTCTTGTTTCCCAATTTTCATATTCATTTGCCGAAAGGTTTCCTG
TCTGTTTCTCATGTGACTTGACTCGACATTGGCTTGCTGAGGCCAGCGAG
CGTACCATTTAAGCGCTAAATAAATGAAGCTTGATTTGGTTCGAGTGGTA
ATTAG
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Coding sequence (CDS) from alignment at ch4:3329512..3331016-

>KJC3_005650-T1 ID=KJC3_005650-T1|Name=KJC3_005650-T1|organism=Aspergillus niger KJC3|type=CDS|length=3930bp|location=Sequence derived from alignment at ch4:3329512..3331016- (Aspergillus niger KJC3)
CGCTGTCCTCCTTGTCTAACCCCGAACTGGGTGTCACCGTCCAGCTTCCC
ATCCTTTCCGTCAAGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGG
TGTCTTGACCAAGGGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTC
TCGTCACCACCAGCGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACC
AACAACCCTGACATGGACGGCACGGTCAAGTATATCGAACGCTGGCAGAA
GCAGCACGGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAAGCGCCAGG
CCCGTGAATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGCGCGGCCTG
AGGGCCAAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATCCAGATGCG
TAAGCGCATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTCCGCTCCCG
ATGAGCCATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATCGGTCCCAG
GCCACCAACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAGCGGAATGA
GAAGGCGGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGGTATCAGTG
AGGAGGAGATGTTCAAGGTCGTCAACACCGGAAAGAAGACCCACAAGAAG
TCCTGGAAGCGCATGATCACCAAGCCTACTTTCGTTGGTAGTGACTTCAC
CAGACGCCCTGTCAAGTACGAACGGTTCATTCGTCCTATGGGTCTGCGTT
ACAAGAAGGCCAACGTTACGCACCTCAGAACGAATGCGCTGTCCTCCTTG
TCTAACCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTCAA
GAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTTGACCAAGG
GTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCACCACCAGC
GGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAACCCTGACAT
GGACGGCACGGTCAAGTATATCGAACGCTGGCAGAAGCAGCACGGTAAGC
GGCTCGATCACGATGAGCGTGTCCGCAAGCGCCAGGCCCGTGAATCGCAC
AAGCAGTCCAAGGATGCGCAGAACCTGCGCGGCCTGAGGGCCAAGCTGTA
CCAGCAGCAGCGCCATAAGGAGAAGATCCAGATGCGTAAGCGCATCAAGG
AGCAGGAAGAGAAGAACGTCAAGTCTTCCGCTCCCGATGAGCCATCCAAG
ACTCCTCTGCCCCAGTATCTGCTTGATCGGTCCCAGGCCACCAACGCCAA
GGCCCTGTCCAGCGCCATCAAGGATAAGCGGAATGAGAAGGCGGCTAAGT
TTGCTGTGCCTCTGCCTAAGGTCAAGGGTATCAGTGAGGAGGAGATGTTC
AAGGTCGTCAACACCGGAAAGAAGACCCACAAGAAGTCCTGGAAGCGCAT
GATCACCAAGCCTACTTTCGTTGGTAGTGACTTCACCAGACGCCCTGTCA
AGTACGAACGGTTCATTCGTCCTATGGGTCTGCGTTACAAGAAGGCCAAC
GTTACGCACCTCAGAACGAATGCGCTGTCCTCCTTGTCTAACCCCGAACT
GGGTGTCACCGTCCAGCTTCCCATCCTTTCCGTCAAGAAGAACCCCCAGA
ACCCTCTGTATACCCAACTGGGTGTCTTGACCAAGGGTACCATCATTGAA
GTGAACGTTTCCGAACTGGGTCTCGTCACCACCAGCGGCAAGGTCGTCTG
GGGTAAATGGGCGCAGATCACCAACAACCCTGACATGGACGGCACGGTCA
AGTATATCGAACGCTGGCAGAAGCAGCACGGTAAGCGGCTCGATCACGAT
GAGCGTGTCCGCAAGCGCCAGGCCCGTGAATCGCACAAGCAGTCCAAGGA
TGCGCAGAACCTGCGCGGCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCC
ATAAGGAGAAGATCCAGATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAG
AACGTCAAGTCTTCCGCTCCCGATGAGCCATCCAAGACTCCTCTGCCCCA
GTATCTGCTTGATCGGTCCCAGGCCACCAACGCCAAGGCCCTGTCCAGCG
CCATCAAGGATAAGCGGAATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTG
CCTAAGGTCAAGGGTATCAGTGAGGAGGAGATGTTCAAGGTCGTCAACAC
CGGAAAGAAGACCCACAAGAAGTCCTGGAAGCGCATGATCACCAAGCCTA
CTTTCGTTGGTAGTGACTTCACCAGACGCCCTGTCAAGTACGAACGGTTC
ATTCGTCCTATGGGTCTGCGTTACAAGAAGGCCAACGTTACGCACCTCAG
AACGAATGCGCTGTCCTCCTTGTCTAACCCCGAACTGGGTGTCACCGTCC
AGCTTCCCATCCTTTCCGTCAAGAAGAACCCCCAGAACCCTCTGTATACC
CAACTGGGTGTCTTGACCAAGGGTACCATCATTGAAGTGAACGTTTCCGA
ACTGGGTCTCGTCACCACCAGCGGCAAGGTCGTCTGGGGTAAATGGGCGC
AGATCACCAACAACCCTGACATGGACGGCACGGTCAAGTATATCGAACGC
TGGCAGAAGCAGCACGGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAA
GCGCCAGGCCCGTGAATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGC
GCGGCCTGAGGGCCAAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATC
CAGATGCGTAAGCGCATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTC
CGCTCCCGATGAGCCATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATC
GGTCCCAGGCCACCAACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAG
CGGAATGAGAAGGCGGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGG
TATCAGTGAGGAGGAGATGTTCAAGGTCGTCAACACCGGAAAGAAGACCC
ACAAGAAGTCCTGGAAGCGCATGATCACCAAGCCTACTTTCGTTGGTAGT
GACTTCACCAGACGCCCTGTCAAGTACGAACGGTTCATTCGTCCTATGGG
TCTGCGTTACAAGAAGGCCAACGTTACGCACCTCAGAACGAATGCGCTGT
CCTCCTTGTCTAACCCCGAACTGGGTGTCACCGTCCAGCTTCCCATCCTT
TCCGTCAAGAAGAACCCCCAGAACCCTCTGTATACCCAACTGGGTGTCTT
GACCAAGGGTACCATCATTGAAGTGAACGTTTCCGAACTGGGTCTCGTCA
CCACCAGCGGCAAGGTCGTCTGGGGTAAATGGGCGCAGATCACCAACAAC
CCTGACATGGACGGCACGGTCAAGTATATCGAACGCTGGCAGAAGCAGCA
CGGTAAGCGGCTCGATCACGATGAGCGTGTCCGCAAGCGCCAGGCCCGTG
AATCGCACAAGCAGTCCAAGGATGCGCAGAACCTGCGCGGCCTGAGGGCC
AAGCTGTACCAGCAGCAGCGCCATAAGGAGAAGATCCAGATGCGTAAGCG
CATCAAGGAGCAGGAAGAGAAGAACGTCAAGTCTTCCGCTCCCGATGAGC
CATCCAAGACTCCTCTGCCCCAGTATCTGCTTGATCGGTCCCAGGCCACC
AACGCCAAGGCCCTGTCCAGCGCCATCAAGGATAAGCGGAATGAGAAGGC
GGCTAAGTTTGCTGTGCCTCTGCCTAAGGTCAAGGGTATCAGTGAGGAGG
AGATGTTCAAGGTCGTCAACACCGGAAAGAAGACCCACAAGAAGTCCTGG
AAGCGCATGATCACCAAGCCTACTTTCGTTGGTAGTGACTTCACCAGACG
CCCTGTCAAGTACGAACGGTTCATTCGTCCTATGGGTCTGCGTTACAAGA
AGGCCAACGTTACGCACCTCAGAACGAATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NSA2KJC3_005650Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005650-T1KJC3_005650-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005650-T1.cdsKJC3_005650-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005650-T1.utr3p1KJC3_005650-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005650-T1.exon5KJC3_005650-T1.exon5Aspergillus niger KJC3exon
KJC3_005650-T1.exon4KJC3_005650-T1.exon4Aspergillus niger KJC3exon
KJC3_005650-T1.exon3KJC3_005650-T1.exon3Aspergillus niger KJC3exon
KJC3_005650-T1.exon2KJC3_005650-T1.exon2Aspergillus niger KJC3exon
KJC3_005650-T1.exon1KJC3_005650-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005650-T1.utr5p1KJC3_005650-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263ZBF
DBxrefInterPro:IPR039411
DBxrefInterPro:IPR022309
DBxrefPFAM:PF01201
ProductRibosome bioproteinsis protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3329512..3331016 -
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