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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3391598..3392884+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005667-T1 ID=KJC3_005667-T1|Name=KJC3_005667-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1287bp|location=Sequence derived from alignment at ch4:3391598..3392884+ (Aspergillus niger KJC3)
ATGGAGAGCCCTCGACAGTCCGATGCAAGCACTCCTGTGGAGCCTTGCTC
CCCTGGTTGCGTTGACACGCCGGCGACGCAATCTTCCGTGTTGTTTGATG
GCAACCTTGAAGAGTTGCTGCGCAACTTTCCCCTCGATCAGTACATCCTC
GTCACAGGGGGTCTCGGGTTCATCGGCAGTCACACAACATTGGAGCTACT
CAAAGCCGGCTATAATGTAATTGTGATCGACAATCTCAGCAACTCTTTCC
AGAGCGTCTTCGACCGCATCAGACAACTGGCCGCAAAGTACCATGACCAG
GAGGGGACATGCATGCCGTCATTGCAGCTCCACGCCCATGATTTCCGGGA
TATTGCTGCTCTTAGAGGCCTTCTTGAGCAGTATCAGATCCAATCCAGAT
GGGGAACTCCCAAGTCCAGAATTGGTGGCGTCATCCACTTTGCTGCTTAT
AAGGCTGTGGAAGAGAGTATCAGGAACCCCTTGAAGTATTACGCGAACAA
TGTTAGTGGTCTTATCGACTTTGCCACAACTTTGGGAGAATTTGGAATTA
AAACATTCATTTTCTCCTCCTCCGCCACGGTGTACGGAACCTTGGCAACT
TCGGGTCTTCCCTTAAAGGAAGAACTCTGTGTCCATAAAGAAGAGGTCTA
CAGTGACCAAGACGGTCTGGAACAGACCGTTAAACCTGGCTGCACGGGTA
TTACGAACCCGTATGGGCGCACCAAATGGATCTGCGAAGCCATATTAGCG
GACCTTGCGGCTTCTGATCCAGAATGGACCATTGTAGCCCTACGCTATTT
CAACCCTATAGGATGTGACGAATCTGGCCTTTTGGGAGAGGATCCCAGGC
AGACGCCCACGAACCTTCTCCCGGTTGTGGTAAAAGTCATGACCGGACAA
TATAAGGAGCTGCAGATGTTTGGCACGGACTGGGACACTGAGGATGGCAC
TGCAGTTCGCGATTTCATCCATGTCACCGATCTTGCTAGGGGACATATTG
CTGCGCTCAACGCCGCCAACGGTGGAAAGCTGGTTGAGAACTTCCGTACC
TTCAACCTGGGCACCGGACGGGGTCACTCTGTGATGGAGGTGGTCAACAC
AATGGAAGCAGTGTCTTCCAAACCTATTCCCAGAAAAGCTGCAGGTCGTC
GCGCTGGAGATGTTGGCTCTTGCGTCGCTGTCGCCACAAGATCCCAGGAC
GAGCTCGAATGGAAGACCGAAAAATCTCTGAAGGATGCTTGCGTGAGCCT
ATGCAATTTCCTCAATGTCAGCGGCCTGTCCTCTTAG back to topCoding sequence (CDS) from alignment at ch4:3391598..3392884+ >KJC3_005667-T1 ID=KJC3_005667-T1|Name=KJC3_005667-T1|organism=Aspergillus niger KJC3|type=CDS|length=1287bp|location=Sequence derived from alignment at ch4:3391598..3392884+ (Aspergillus niger KJC3)
ATGGAGAGCCCTCGACAGTCCGATGCAAGCACTCCTGTGGAGCCTTGCTC
CCCTGGTTGCGTTGACACGCCGGCGACGCAATCTTCCGTGTTGTTTGATG
GCAACCTTGAAGAGTTGCTGCGCAACTTTCCCCTCGATCAGTACATCCTC
GTCACAGGGGGTCTCGGGTTCATCGGCAGTCACACAACATTGGAGCTACT
CAAAGCCGGCTATAATGTAATTGTGATCGACAATCTCAGCAACTCTTTCC
AGAGCGTCTTCGACCGCATCAGACAACTGGCCGCAAAGTACCATGACCAG
GAGGGGACATGCATGCCGTCATTGCAGCTCCACGCCCATGATTTCCGGGA
TATTGCTGCTCTTAGAGGCCTTCTTGAGCAGTATCAGATCCAATCCAGAT
GGGGAACTCCCAAGTCCAGAATTGGTGGCGTCATCCACTTTGCTGCTTAT
AAGGCTGTGGAAGAGAGTATCAGGAACCCCTTGAAGTATTACGCGAACAA
TGTTAGTGGTCTTATCGACTTTGCCACAACTTTGGGAGAATTTGGAATTA
AAACATTCATTTTCTCCTCCTCCGCCACGGTGTACGGAACCTTGGCAACT
TCGGGTCTTCCCTTAAAGGAAGAACTCTGTGTCCATAAAGAAGAGGTCTA
CAGTGACCAAGACGGTCTGGAACAGACCGTTAAACCTGGCTGCACGGGTA
TTACGAACCCGTATGGGCGCACCAAATGGATCTGCGAAGCCATATTAGCG
GACCTTGCGGCTTCTGATCCAGAATGGACCATTGTAGCCCTACGCTATTT
CAACCCTATAGGATGTGACGAATCTGGCCTTTTGGGAGAGGATCCCAGGC
AGACGCCCACGAACCTTCTCCCGGTTGTGGTAAAAGTCATGACCGGACAA
TATAAGGAGCTGCAGATGTTTGGCACGGACTGGGACACTGAGGATGGCAC
TGCAGTTCGCGATTTCATCCATGTCACCGATCTTGCTAGGGGACATATTG
CTGCGCTCAACGCCGCCAACGGTGGAAAGCTGGTTGAGAACTTCCGTACC
TTCAACCTGGGCACCGGACGGGGTCACTCTGTGATGGAGGTGGTCAACAC
AATGGAAGCAGTGTCTTCCAAACCTATTCCCAGAAAAGCTGCAGGTCGTC
GCGCTGGAGATGTTGGCTCTTGCGTCGCTGTCGCCACAAGATCCCAGGAC
GAGCTCGAATGGAAGACCGAAAAATCTCTGAAGGATGCTTGCGTGAGCCT
ATGCAATTTCCTCAATGTCAGCGGCCTGTCCTCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006012 | galactose metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003978 | UDP-glucose 4-epimerase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR005886 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF07993 |
| DBxref | PFAM:PF16363 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3391598..3392884 + |
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