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KJC3_005676-T1, KJC3_005676-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005676-T1
Unique NameKJC3_005676-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3414476..3415672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005676-T1 ID=KJC3_005676-T1|Name=KJC3_005676-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1197bp|location=Sequence derived from alignment at ch4:3414476..3415672- (Aspergillus niger KJC3)
TTCTGTATGGCCTCGACTTTTGCTTGTTTTTGACGGTTTTTTTGTTTTAC
ATTTGCCTCTTCTACGCATCCATCATGCGGGGCTCTCCTAGCTCTGGCTC
CAAGCCAGAGAAGACCATGTCTTCGCGGCTGCTGACCATGAAGGTATGTC
TGCAACATCACAATTAATTTTCTTTTTCCGTTTCAAGAATAATATACTAA
TGTCGTAGTTTATGCAACGCGCTGCTGCCACAAATGCTGCCCGTGAAACA
TCTCAGCCCGCATCCACCGACGACTCCAAGGTTTCCACTCCCCCGAAACG
ACAGAGACTGTCTACCGGCCCAGCCGAAAGCCCCGTCGGCACCCCCAAGT
CGGATCTCGAGGCGATTTCGGCTGCCCTTGCTGAGGAGGAGGAGAAACGG
AAAGAAGCCCTTGCACGTCAGGCTCAAGACTCGGGTGACACAGAATGGGT
GCTCGACTATGGTGTGGCGGAGCCAGTTGCTCAGTATGCGCCGCCGCCGT
TCATTGTCGCGGATGGCTCGCTGGATGCGGACGACGATGACATAGCGGTC
GGTGGCCGACAAGCATACGGAAACTTCAAACGAAAGAAGAAGACTGCGGT
TCGTATTCTCACATGATACACTTTAACCATTTTTCTGACATTTCTCAGAC
TGGCGAAACCGAAGCCGAGTCCGACGATGACGATGTTGATGCAATGATAA
AGAAAGAAAGCAACAAGCCACATCGCGTCAAATTGTCGCAACTTACAAGC
ATCTCCGGTGGAAGACATGCGACGATGGGCGACGATAAAAAACAGAAGAA
GCGCAAACATAAATAAAGTACACTTGGACAACCGACATATCTGGAGACAA
GTATTGTTCCGGGTCTTGCTCGCCAGAAGATGAGATTCGACATTGCCTTA
CCAATAAGCCCCGTTATCCCTCGCTTGAGCATAATTATGAGTCTGGTAGG
CCTCATATCTTCGGTCGTGGTAGCCCATCACGGGTGAATATGAAGACGGG
TGGGCATCGGTACCACTCTTAGGCGCTGTGCCATACCATTGACTTCTGCC
AGGATACTTGTCTTTTGATCTATCATAGTCGATGACTGCATTCGTTCTTG
GTTCGACTCTGTCAGCAGTAGGGCCGTACAGGTATCTGGCAGAGTGCGTT
GCTGACCTACGGACAGCAGGTTGGTCGTCTGTGTGATTGTATAAGGA
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Coding sequence (CDS) from alignment at ch4:3414476..3415672-

>KJC3_005676-T1 ID=KJC3_005676-T1|Name=KJC3_005676-T1|organism=Aspergillus niger KJC3|type=CDS|length=1881bp|location=Sequence derived from alignment at ch4:3414476..3415672- (Aspergillus niger KJC3)
ACTGGCGAAACCGAAGCCGAGTCCGACGATGACGATGTTGATGCAATGAT
AAAGAAAGAAAGCAACAAGCCACATCGCGTCAAATTGTCGCAACTTACAA
GCATCTCCGGTGGAAGACATGCGACGATGGGCGACGATAAAAAACAGAAG
AAGCGCAAACATAAATAATTTATGCAACGCGCTGCTGCCACAAATGCTGC
CCGTGAAACATCTCAGCCCGCATCCACCGACGACTCCAAGGTTTCCACTC
CCCCGAAACGACAGAGACTGTCTACCGGCCCAGCCGAAAGCCCCGTCGGC
ACCCCCAAGTCGGATCTCGAGGCGATTTCGGCTGCCCTTGCTGAGGAGGA
GGAGAAACGGAAAGAAGCCCTTGCACGTCAGGCTCAAGACTCGGGTGACA
CAGAATGGGTGCTCGACTATGGTGTGGCGGAGCCAGTTGCTCAGTATGCG
CCGCCGCCGTTCATTGTCGCGGATGGCTCGCTGGATGCGGACGACGATGA
CATAGCGGTCGGTGGCCGACAAGCATACGGAAACTTCAAACGAAAGAAGA
AGACTGCGATGCGGGGCTCTCCTAGCTCTGGCTCCAAGCCAGAGAAGACC
ATGTCTTCGCGGCTGCTGACCATGAAGACTGGCGAAACCGAAGCCGAGTC
CGACGATGACGATGTTGATGCAATGATAAAGAAAGAAAGCAACAAGCCAC
ATCGCGTCAAATTGTCGCAACTTACAAGCATCTCCGGTGGAAGACATGCG
ACGATGGGCGACGATAAAAAACAGAAGAAGCGCAAACATAAATAATTTAT
GCAACGCGCTGCTGCCACAAATGCTGCCCGTGAAACATCTCAGCCCGCAT
CCACCGACGACTCCAAGGTTTCCACTCCCCCGAAACGACAGAGACTGTCT
ACCGGCCCAGCCGAAAGCCCCGTCGGCACCCCCAAGTCGGATCTCGAGGC
GATTTCGGCTGCCCTTGCTGAGGAGGAGGAGAAACGGAAAGAAGCCCTTG
CACGTCAGGCTCAAGACTCGGGTGACACAGAATGGGTGCTCGACTATGGT
GTGGCGGAGCCAGTTGCTCAGTATGCGCCGCCGCCGTTCATTGTCGCGGA
TGGCTCGCTGGATGCGGACGACGATGACATAGCGGTCGGTGGCCGACAAG
CATACGGAAACTTCAAACGAAAGAAGAAGACTGCGATGCGGGGCTCTCCT
AGCTCTGGCTCCAAGCCAGAGAAGACCATGTCTTCGCGGCTGCTGACCAT
GAAGACTGGCGAAACCGAAGCCGAGTCCGACGATGACGATGTTGATGCAA
TGATAAAGAAAGAAAGCAACAAGCCACATCGCGTCAAATTGTCGCAACTT
ACAAGCATCTCCGGTGGAAGACATGCGACGATGGGCGACGATAAAAAACA
GAAGAAGCGCAAACATAAATAATTTATGCAACGCGCTGCTGCCACAAATG
CTGCCCGTGAAACATCTCAGCCCGCATCCACCGACGACTCCAAGGTTTCC
ACTCCCCCGAAACGACAGAGACTGTCTACCGGCCCAGCCGAAAGCCCCGT
CGGCACCCCCAAGTCGGATCTCGAGGCGATTTCGGCTGCCCTTGCTGAGG
AGGAGGAGAAACGGAAAGAAGCCCTTGCACGTCAGGCTCAAGACTCGGGT
GACACAGAATGGGTGCTCGACTATGGTGTGGCGGAGCCAGTTGCTCAGTA
TGCGCCGCCGCCGTTCATTGTCGCGGATGGCTCGCTGGATGCGGACGACG
ATGACATAGCGGTCGGTGGCCGACAAGCATACGGAAACTTCAAACGAAAG
AAGAAGACTGCGATGCGGGGCTCTCCTAGCTCTGGCTCCAAGCCAGAGAA
GACCATGTCTTCGCGGCTGCTGACCATGAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005676KJC3_005676Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005676-T1KJC3_005676-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005676-T1.cdsKJC3_005676-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005676-T1.utr3p2KJC3_005676-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_005676-T1.utr3p1KJC3_005676-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005676-T1.exon4KJC3_005676-T1.exon4Aspergillus niger KJC3exon
KJC3_005676-T1.exon3KJC3_005676-T1.exon3Aspergillus niger KJC3exon
KJC3_005676-T1.exon2KJC3_005676-T1.exon2Aspergillus niger KJC3exon
KJC3_005676-T1.exon1KJC3_005676-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005676-T1.utr5p1KJC3_005676-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3414476..3415672 -
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