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KJC3_005681-T1, KJC3_005681-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005681-T1
Unique NameKJC3_005681-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3421208..3422891+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005681-T1 ID=KJC3_005681-T1|Name=KJC3_005681-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1684bp|location=Sequence derived from alignment at ch4:3421208..3422891+ (Aspergillus niger KJC3)
ATGGGTTTACTGAGCCGGCTTCGCAGGCGGTCCAAGAGCCATAGCCGCGC
GGGGAATGTGGCCACCTCCTACGACCACCTCTGCGTTGACTCCCACCACA
CCTCCGGCCTCGACATCACGAAGAGGCTTCCCCGACCGCTACTGGCGCGC
ATCTTCACCTATGTATGTCCGCACACCATCGATTCGAGCTATGACACCTC
AGAGGAATCGATGACAGAGGATGGCTGCATGCTCTGTGATATGCGCGACC
TGGCACATTGTGCTGTGGTCTGTAAACGGTGGTACTTAGAGGCTCGGGCT
TTGCTGTGAGTTTCTTTTGTTCATAATTCCTCTTTCCCTGCTGATCGATG
ACCCTAGATACGCTCACGTCCGCATCGACGCCGTCCACTACTGCGAGCTC
GAGGTCCAACTTGCCGCCAAACGAAAACGCCATTCCTTCTTCGACCGCAA
CGGCGAAGCTATCGATGCCCCACAAGTACGATTGCAGTTGTTCATGCAGA
CTGTCCGAGATTCGCGAGACCTGGGGCGCATGGTGCTCTCCCTACGGATG
CCATACATGACACGCGAGGCCAGCAAGGCGGAGATTGCGCGCACCATCTC
CGTGACGCCCAACATACGCTACGTTGACCTGCCGGCGGGAATATACAGCG
ACGACGCGTCGTGTCTGGCCTTGAAGCAGGAGCTTATCGGACGGTGTCCG
GATTTGCGTCGCATGACCTACCGACACGGCGCGGAGGGTAGCTTCTCGCA
GCTGCCAGAAGCCCGTCTTTGGCAGAATCTGGAGGTGCTGGAACTCTCTC
GATTGCACATTGAGCCGCGGCTTCTTCGCATGGGGCTGGGCTCGTTTCCC
AAGCTTCGCGATCTGACCCTCGACGACCTGCCGTGGCTGGACGACTCGGC
ATTTGACCTCTCCGACACCCTGCCTCCTTTCCCAGCCGTCCAGCGGCTGA
CCCTTCGCGATACCCCGAACGTCACAGCAAGCGGGCTTGCCGGCGTTCTC
TCCCTGCCTTTGAACCGTAAGGTGCTACAGTATTTGACACTGTCTGCGAC
AGGAGTGCTCTCATCCACTCTGCACCAGATCCTATCCGCTGCGCCGCAGC
TACACGCCCTGTCAGTCATTCAGGACGTGACGCGGTCCTTCCCGGCCGAC
CGGGTGCCGCCGCTGTCCTCCCGGTCGCTGCAACTCCTACACTTCGAAAT
CACCTCGCCGGCGGGGTCGTACGGTCTGCCGCCAGTAGCAGCGTCCTACT
ACACGTACCTGATCTCTTCGCTCATGTCGAACTGCCTGCCAGGACTGCGT
GACCTGTACGTCCGCGACGCCAGCTTCCCAGAGACACTGCTGCTGGCACC
ACCACCGCGACTATTCGGCGGTGGCGAGAGCGGACCGCAGTTCTTCAGCG
GAGGAATCTCACAGCCGCTGAACGTGTACAGCAAGGGGTTAGACGAGCTA
GAATGGAACTTTACGCCGTACGAGCCGCCTTCAACACGAGGGCGGCGCGA
TAGCACAACACGACCGGTGAGCTTCCACGACGCGCAGCTCAGCCGGTCGT
GGGGCGGAGACGCACGCAAGAGCGTGCTAGTGGGCAATGGGTTTGGAGGG
TTCCTGGCAGTGCCAGTGGACGACGGACGACCGAAGAGCAGCGGGGGATG
GCGACGAGAGAGCCGACAAGATTTGTGGAGGTAG
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Coding sequence (CDS) from alignment at ch4:3421208..3422891+

>KJC3_005681-T1 ID=KJC3_005681-T1|Name=KJC3_005681-T1|organism=Aspergillus niger KJC3|type=CDS|length=3264bp|location=Sequence derived from alignment at ch4:3421208..3422891+ (Aspergillus niger KJC3)
ATGGGTTTACTGAGCCGGCTTCGCAGGCGGTCCAAGAGCCATAGCCGCGC
GGGGAATGTGGCCACCTCCTACGACCACCTCTGCGTTGACTCCCACCACA
CCTCCGGCCTCGACATCACGAAGAGGCTTCCCCGACCGCTACTGGCGCGC
ATCTTCACCTATGTATGTCCGCACACCATCGATTCGAGCTATGACACCTC
AGAGGAATCGATGACAGAGGATGGCTGCATGCTCTGTGATATGCGCGACC
TGGCACATTGTGCTGTGGTCTGTAAACGGTGGTACTTAGAGGCTCGGGCT
TTGCTATACGCTCACGTCCGCATCGACGCCGTCCACTACTGCGAGCTCGA
GGTCCAACTTGCCGCCAAACGAAAACGCCATTCCTTCTTCGACCGCAACG
GCGAAGCTATCGATGCCCCACAAGTACGATTGCAGTTGTTCATGCAGACT
GTCCGAGATTCGCGAGACCTGGGGCGCATGGTGCTCTCCCTACGGATGCC
ATACATGACACGCGAGGCCAGCAAGGCGGAGATTGCGCGCACCATCTCCG
TGACGCCCAACATACGCTACGTTGACCTGCCGGCGGGAATATACAGCGAC
GACGCGTCGTGTCTGGCCTTGAAGCAGGAGCTTATCGGACGGTGTCCGGA
TTTGCGTCGCATGACCTACCGACACGGCGCGGAGGGTAGCTTCTCGCAGC
TGCCAGAAGCCCGTCTTTGGCAGAATCTGGAGGTGCTGGAACTCTCTCGA
TTGCACATTGAGCCGCGGCTTCTTCGCATGGGGCTGGGCTCGTTTCCCAA
GCTTCGCGATCTGACCCTCGACGACCTGCCGTGGCTGGACGACTCGGCAT
TTGACCTCTCCGACACCCTGCCTCCTTTCCCAGCCGTCCAGCGGCTGACC
CTTCGCGATACCCCGAACGTCACAGCAAGCGGGCTTGCCGGCGTTCTCTC
CCTGCCTTTGAACCGTAAGGTGCTACAGTATTTGACACTGTCTGCGACAG
GAGTGCTCTCATCCACTCTGCACCAGATCCTATCCGCTGCGCCGCAGCTA
CACGCCCTGTCAGTCATTCAGGACGTGACGCGGTCCTTCCCGGCCGACCG
GGTGCCGCCGCTGTCCTCCCGGTCGCTGCAACTCCTACACTTCGAAATCA
CCTCGCCGGCGGGGTCGTACGGTCTGCCGCCAGTAGCAGCGTCCTACTAC
ACGTACCTGATCTCTTCGCTCATGTCGAACTGCCTGCCAGGACTGCGTGA
CCTGTACGTCCGCGACGCCAGCTTCCCAGAGACACTGCTGCTGGCACCAC
CACCGCGACTATTCGGCGGTGGCGAGAGCGGACCGCAGTTCTTCAGCGGA
GGAATCTCACAGCCGCTGAACGTGTACAGCAAGGGGTTAGACGAGCTAGA
ATGGAACTTTACGCCGTACGAGCCGCCTTCAACACGAGGGCGGCGCGATA
GCACAACACGACCGGTGAGCTTCCACGACGCGCAGCTCAGCCGGTCGTGG
GGCGGAGACGCACGCAAGAGCGTGCTAGTGGGCAATGGGTTTGGAGGGTT
CCTGGCAGTGCCAGTGGACGACGGACGACCGAAGAGCAGCGGGGGATGGC
GACGAGAGAGCCGACAAGATTTGTGGAGGTAGATGGGTTTACTGAGCCGG
CTTCGCAGGCGGTCCAAGAGCCATAGCCGCGCGGGGAATGTGGCCACCTC
CTACGACCACCTCTGCGTTGACTCCCACCACACCTCCGGCCTCGACATCA
CGAAGAGGCTTCCCCGACCGCTACTGGCGCGCATCTTCACCTATGTATGT
CCGCACACCATCGATTCGAGCTATGACACCTCAGAGGAATCGATGACAGA
GGATGGCTGCATGCTCTGTGATATGCGCGACCTGGCACATTGTGCTGTGG
TCTGTAAACGGTGGTACTTAGAGGCTCGGGCTTTGCTATACGCTCACGTC
CGCATCGACGCCGTCCACTACTGCGAGCTCGAGGTCCAACTTGCCGCCAA
ACGAAAACGCCATTCCTTCTTCGACCGCAACGGCGAAGCTATCGATGCCC
CACAAGTACGATTGCAGTTGTTCATGCAGACTGTCCGAGATTCGCGAGAC
CTGGGGCGCATGGTGCTCTCCCTACGGATGCCATACATGACACGCGAGGC
CAGCAAGGCGGAGATTGCGCGCACCATCTCCGTGACGCCCAACATACGCT
ACGTTGACCTGCCGGCGGGAATATACAGCGACGACGCGTCGTGTCTGGCC
TTGAAGCAGGAGCTTATCGGACGGTGTCCGGATTTGCGTCGCATGACCTA
CCGACACGGCGCGGAGGGTAGCTTCTCGCAGCTGCCAGAAGCCCGTCTTT
GGCAGAATCTGGAGGTGCTGGAACTCTCTCGATTGCACATTGAGCCGCGG
CTTCTTCGCATGGGGCTGGGCTCGTTTCCCAAGCTTCGCGATCTGACCCT
CGACGACCTGCCGTGGCTGGACGACTCGGCATTTGACCTCTCCGACACCC
TGCCTCCTTTCCCAGCCGTCCAGCGGCTGACCCTTCGCGATACCCCGAAC
GTCACAGCAAGCGGGCTTGCCGGCGTTCTCTCCCTGCCTTTGAACCGTAA
GGTGCTACAGTATTTGACACTGTCTGCGACAGGAGTGCTCTCATCCACTC
TGCACCAGATCCTATCCGCTGCGCCGCAGCTACACGCCCTGTCAGTCATT
CAGGACGTGACGCGGTCCTTCCCGGCCGACCGGGTGCCGCCGCTGTCCTC
CCGGTCGCTGCAACTCCTACACTTCGAAATCACCTCGCCGGCGGGGTCGT
ACGGTCTGCCGCCAGTAGCAGCGTCCTACTACACGTACCTGATCTCTTCG
CTCATGTCGAACTGCCTGCCAGGACTGCGTGACCTGTACGTCCGCGACGC
CAGCTTCCCAGAGACACTGCTGCTGGCACCACCACCGCGACTATTCGGCG
GTGGCGAGAGCGGACCGCAGTTCTTCAGCGGAGGAATCTCACAGCCGCTG
AACGTGTACAGCAAGGGGTTAGACGAGCTAGAATGGAACTTTACGCCGTA
CGAGCCGCCTTCAACACGAGGGCGGCGCGATAGCACAACACGACCGGTGA
GCTTCCACGACGCGCAGCTCAGCCGGTCGTGGGGCGGAGACGCACGCAAG
AGCGTGCTAGTGGGCAATGGGTTTGGAGGGTTCCTGGCAGTGCCAGTGGA
CGACGGACGACCGAAGAGCAGCGGGGGATGGCGACGAGAGAGCCGACAAG
ATTTGTGGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005681KJC3_005681Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005681-T1.exon1KJC3_005681-T1.exon1Aspergillus niger KJC3exon
KJC3_005681-T1.exon2KJC3_005681-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005681-T1.cdsKJC3_005681-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005681-T1KJC3_005681-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3421208..3422891 +
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