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KJC3_005683-T1, KJC3_005683-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005683-T1
Unique NameKJC3_005683-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3425387..3426629-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005683-T1 ID=KJC3_005683-T1|Name=KJC3_005683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1243bp|location=Sequence derived from alignment at ch4:3425387..3426629- (Aspergillus niger KJC3)
GTAATCGTCAGGTCCATATATAAACATCAGCAGACCAGAGACAAATCAAT
CATAGAGTCAGACATCGAAGCATTGGACCTGTTCTATACTTCCTCAGCAT
CAGCATGAAAATCGTCCTGCTCGGCTCAACCGGCCAAATCGGCCAATCCA
TCCTCCGCGCCCTCCTCACCAAGACCTCCCACCAAGTCGTGCAACTAATT
GCTCCGCAGTCCGAATCCACTGCCCGCTCTATAAACAAGAAATTTACAGC
AGAGCAACAAGGCCGTCTGACCACAGAATCAGTGGACCTCCTATCCTGCA
GTGCAGACGACCTCGTCCCGTATCTCGCCAATGTCGAGATCATCATCAGC
GCCTTGAACGGCAAAGCGCTGCAAGCACAATCCAAACTTCAAGATGCCGG
TGCAAAGACAGGGGTTAGGAGATTCTACCCTAGTGAATATGGCATGCATC
ATGTCTATCGACCGCCGGGAGATGAAGTTGGGTATCTTCATCCGGTAATT
CCACACTAGATGTATCAATATAGGCACCAGATACTAATAATGTGATTGCA
GATGTGGACCACCAAATCCGCCGCCAACGAAGCCTGTCTACACCACCCCG
CCATAAAATCGGGCTCTATGACATACACCCTCATTGGCTGCGGCGACTTT
TACAACCAATCCCGCGAAGAGACCTGGTGTCCATGGACGAATCCCAAGGC
ATCTGAATACACGCTGCATATCCTCGGGGATGCGGATGCTACTATTGACT
TTACGCACATCGACGATCTAGGGGATTTTATCGTCGAGACGATAAAGCAT
CCGGAGCGATCGGAGAACCGCACGCTGAACTTTGTGAGTGACCATATCTC
GTATAATGAGATTGCGAGGTTATTGGAGAAGTACTCCGGACGGAAGGTCA
ACAAGACAGTGTATCCAATGAGCCTGATGGATGATGTATGGAAGGATAAG
GAGAAGGTGCCGGCGGAAGTGAAAGGAAAAGGAGCGTTTCCGGATGATTT
CTGGATTCTGGTCAAGGGGATGCAAGGGGCTGGGAGGTTTTGGAGACCAC
CGGGGGAGGTGCATAATGGGGAGTTTGAGATGGAGGGGAGGACTTTTGAG
TGGTATTTGAGGGGTTTGTTTGGGGGAGAGTATGAGGTTTGATGGTTGGG
TATGGAGACATGTGGTACATTGTATGGCTGCGATGTCTGTTCTAGAGCAG
GCTTTACTTTCTGCAGGCTATATTGGTGATAGTGGCTAGCCCG
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Coding sequence (CDS) from alignment at ch4:3425387..3426629-

>KJC3_005683-T1 ID=KJC3_005683-T1|Name=KJC3_005683-T1|organism=Aspergillus niger KJC3|type=CDS|length=1962bp|location=Sequence derived from alignment at ch4:3425387..3426629- (Aspergillus niger KJC3)
ATGTGGACCACCAAATCCGCCGCCAACGAAGCCTGTCTACACCACCCCGC
CATAAAATCGGGCTCTATGACATACACCCTCATTGGCTGCGGCGACTTTT
ACAACCAATCCCGCGAAGAGACCTGGTGTCCATGGACGAATCCCAAGGCA
TCTGAATACACGCTGCATATCCTCGGGGATGCGGATGCTACTATTGACTT
TACGCACATCGACGATCTAGGGGATTTTATCGTCGAGACGATAAAGCATC
CGGAGCGATCGGAGAACCGCACGCTGAACTTTGTGAGTGACCATATCTCG
TATAATGAGATTGCGAGGTTATTGGAGAAGTACTCCGGACGGAAGGTCAA
CAAGACAGTGTATCCAATGAGCCTGATGGATGATGTATGGAAGGATAAGG
AGAAGGTGCCGGCGGAAGTGAAAGGAAAAGGAGCGTTTCCGGATGATTTC
TGGATTCTGGTCAAGGGGATGCAAGGGGCTGGGAGGTTTTGGAGACCACC
GGGGGAGGTGCATAATGGGGAGTTTGAGATGGAGGGGAGGACTTTTGAGT
GGTATTTGAGGGGTTTGTTTGGGGGAGAGTATGAGGTTTGAATGAAAATC
GTCCTGCTCGGCTCAACCGGCCAAATCGGCCAATCCATCCTCCGCGCCCT
CCTCACCAAGACCTCCCACCAAGTCGTGCAACTAATTGCTCCGCAGTCCG
AATCCACTGCCCGCTCTATAAACAAGAAATTTACAGCAGAGCAACAAGGC
CGTCTGACCACAGAATCAGTGGACCTCCTATCCTGCAGTGCAGACGACCT
CGTCCCGTATCTCGCCAATGTCGAGATCATCATCAGCGCCTTGAACGGCA
AAGCGCTGCAAGCACAATCCAAACTTCAAGATGCCGGTGCAAAGACAGGG
GTTAGGAGATTCTACCCTAGTGAATATGGCATGCATCATGTCTATCGACC
GCCGGGAGATGAAGTTGGGTATCTTCATCCGATGTGGACCACCAAATCCG
CCGCCAACGAAGCCTGTCTACACCACCCCGCCATAAAATCGGGCTCTATG
ACATACACCCTCATTGGCTGCGGCGACTTTTACAACCAATCCCGCGAAGA
GACCTGGTGTCCATGGACGAATCCCAAGGCATCTGAATACACGCTGCATA
TCCTCGGGGATGCGGATGCTACTATTGACTTTACGCACATCGACGATCTA
GGGGATTTTATCGTCGAGACGATAAAGCATCCGGAGCGATCGGAGAACCG
CACGCTGAACTTTGTGAGTGACCATATCTCGTATAATGAGATTGCGAGGT
TATTGGAGAAGTACTCCGGACGGAAGGTCAACAAGACAGTGTATCCAATG
AGCCTGATGGATGATGTATGGAAGGATAAGGAGAAGGTGCCGGCGGAAGT
GAAAGGAAAAGGAGCGTTTCCGGATGATTTCTGGATTCTGGTCAAGGGGA
TGCAAGGGGCTGGGAGGTTTTGGAGACCACCGGGGGAGGTGCATAATGGG
GAGTTTGAGATGGAGGGGAGGACTTTTGAGTGGTATTTGAGGGGTTTGTT
TGGGGGAGAGTATGAGGTTTGAATGAAAATCGTCCTGCTCGGCTCAACCG
GCCAAATCGGCCAATCCATCCTCCGCGCCCTCCTCACCAAGACCTCCCAC
CAAGTCGTGCAACTAATTGCTCCGCAGTCCGAATCCACTGCCCGCTCTAT
AAACAAGAAATTTACAGCAGAGCAACAAGGCCGTCTGACCACAGAATCAG
TGGACCTCCTATCCTGCAGTGCAGACGACCTCGTCCCGTATCTCGCCAAT
GTCGAGATCATCATCAGCGCCTTGAACGGCAAAGCGCTGCAAGCACAATC
CAAACTTCAAGATGCCGGTGCAAAGACAGGGGTTAGGAGATTCTACCCTA
GTGAATATGGCATGCATCATGTCTATCGACCGCCGGGAGATGAAGTTGGG
TATCTTCATCCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005683KJC3_005683Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005683-T1KJC3_005683-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005683-T1.cdsKJC3_005683-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005683-T1.utr3p1KJC3_005683-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005683-T1.exon2KJC3_005683-T1.exon2Aspergillus niger KJC3exon
KJC3_005683-T1.exon1KJC3_005683-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005683-T1.utr5p1KJC3_005683-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3425387..3426629 -
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