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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3433845..3435015+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005686-T1 ID=KJC3_005686-T1|Name=KJC3_005686-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1171bp|location=Sequence derived from alignment at ch4:3433845..3435015+ (Aspergillus niger KJC3)
TGCAGCGCTAAGGTGCAGTAACTTGTGATGTTAATATCAAAGCTAAGTCT
TTCGCGTGGATGCCTACCACGATTCATGGTTTACCAACGGGCTACCTACA
CAATGCTGTCACAAGCTCTAGCTACCCATGAAAGGCGCTCCAATACACCG
TAGGTACATCCAGCAAATATAGCTGTTCAAGCTAACCCACCTAGATTCCT
TCTCTCAAAAGAGTCATTTGACACACATGTACACGTCTTCGATCCCAAGC
TTGGCCCATATGCGGCCGGGCGAGCATACACTCCGGAGGACGCGCCGTTG
CAAAAGTTACTAGCATTAAATCAGAGTCTTACAAGGAGCTACAACAACAC
TACCCTGGTGTTGGTTCAGCCATCACCTTACAAGACTGACTGTTCGGTTA
TGATGCATTGCCTGCGTGAATTGAAGGACCGAGGCATCAGCTCGTTCGGA
ATTGCAGTGTTAGATCTTAACTCTACTACCAATGCGCAATTAAGCGAATT
GCACGCCCTTGGAGTGCGAGGTGTTCGATTAAACTTCCAAGCAGATGGGA
AAGAAGTCGACATTACGCATTTAGTAGCTATTCTGAATCATACTGCAGAC
CGCATACGCCATCTTCCCGGCTGGGCGATCCAGTTGTTCGTTCCAGGGTG
GACATGGGACCGTGAGTACTGATCTACTAATGACAGTGTATCACAACTTT
CATCACTGATATTCTACAGTCCTGTATGATGCTGTTCGTGAGCTTCCCGT
ACGGGTTATTGCAGACCATCTAGGTGGCATGCGTGGCGCATCTAAGCTGC
CTTCTGATTTACAGTCGACGCCAACATCCCAACCGGGATTTCGCTCCCTC
CTATCATTAGCGAAACAATCGATTGTCTATGTAAAGGTTTCTGGGTTATA
TCGTATGTCAAATTGCTTAGCCTCGACCTTTGATGACCTGCAGCCGATCG
TTCAAGTAATGGCCAGCGAGATTTCTAATCAGATTATTTGGGGGAGCGAT
TGGCCGCACACGGGCGATGGACATGAGCGGGTTAAACACTCAATAGAAAA
CAAAGAACCGTTCAGGACGATCGACAACCATGCAATCCTCCAAAGATTGT
ATGACTGGATGGGAGATGATGCCTACTGGAAGATGATGGTGGATAACCCA
GGCCGGCTGTATATGGATTGA back to topCoding sequence (CDS) from alignment at ch4:3433845..3435015+ >KJC3_005686-T1 ID=KJC3_005686-T1|Name=KJC3_005686-T1|organism=Aspergillus niger KJC3|type=CDS|length=3123bp|location=Sequence derived from alignment at ch4:3433845..3435015+ (Aspergillus niger KJC3)
ATGTTAATATCAAAGCTAAGTCTTTCGCGTGGATGCCTACCACGATTCAT
GGTTTACCAACGGGCTACCTACACAATGCTGTCACAAGCTCTAGCTACCC
ATGAAAGGCGCTCCAATACACCATTCCTTCTCTCAAAAGAGTCATTTGAC
ACACATGTACACGTCTTCGATCCCAAGCTTGGCCCATATGCGGCCGGGCG
AGCATACACTCCGGAGGACGCGCCGTTGCAAAAGTTACTAGCATTAAATC
AGAGTCTTACAAGGAGCTACAACAACACTACCCTGGTGTTGGTTCAGCCA
TCACCTTACAAGACTGACTGTTCGGTTATGATGCATTGCCTGCGTGAATT
GAAGGACCGAGGCATCAGCTCGTTCGGAATTGCAGTGTTAGATCTTAACT
CTACTACCAATGCGCAATTAAGCGAATTGCACGCCCTTGGAGTGCGAGGT
GTTCGATTAAACTTCCAAGCAGATGGGAAAGAAGTCGACATTACGCATTT
AGTAGCTATTCTGAATCATACTGCAGACCGCATACGCCATCTTCCCGGCT
GGGCGATCCAGTTGTTCGTTCCAGGGTGGACATGGGACCTCCTGTATGAT
GCTGTTCGTGAGCTTCCCGTACGGGTTATTGCAGACCATCTAGGTGGCAT
GCGTGGCGCATCTAAGCTGCCTTCTGATTTACAGTCGACGCCAACATCCC
AACCGGGATTTCGCTCCCTCCTATCATTAGCGAAACAATCGATTGTCTAT
GTAAAGGTTTCTGGGTTATATCGTATGTCAAATTGCTTAGCCTCGACCTT
TGATGACCTGCAGCCGATCGTTCAAGTAATGGCCAGCGAGATTTCTAATC
AGATTATTTGGGGGAGCGATTGGCCGCACACGGGCGATGGACATGAGCGG
GTTAAACACTCAATAGAAAACAAAGAACCGTTCAGGACGATCGACAACCA
TGCAATCCTCCAAAGATTGTATGACTGGATGGGAGATGATGCCTACTGGA
AGATGATGGTGGATAACCCAGGCCGGCTGTATATGGATTGAATGTTAATA
TCAAAGCTAAGTCTTTCGCGTGGATGCCTACCACGATTCATGGTTTACCA
ACGGGCTACCTACACAATGCTGTCACAAGCTCTAGCTACCCATGAAAGGC
GCTCCAATACACCATTCCTTCTCTCAAAAGAGTCATTTGACACACATGTA
CACGTCTTCGATCCCAAGCTTGGCCCATATGCGGCCGGGCGAGCATACAC
TCCGGAGGACGCGCCGTTGCAAAAGTTACTAGCATTAAATCAGAGTCTTA
CAAGGAGCTACAACAACACTACCCTGGTGTTGGTTCAGCCATCACCTTAC
AAGACTGACTGTTCGGTTATGATGCATTGCCTGCGTGAATTGAAGGACCG
AGGCATCAGCTCGTTCGGAATTGCAGTGTTAGATCTTAACTCTACTACCA
ATGCGCAATTAAGCGAATTGCACGCCCTTGGAGTGCGAGGTGTTCGATTA
AACTTCCAAGCAGATGGGAAAGAAGTCGACATTACGCATTTAGTAGCTAT
TCTGAATCATACTGCAGACCGCATACGCCATCTTCCCGGCTGGGCGATCC
AGTTGTTCGTTCCAGGGTGGACATGGGACCTCCTGTATGATGCTGTTCGT
GAGCTTCCCGTACGGGTTATTGCAGACCATCTAGGTGGCATGCGTGGCGC
ATCTAAGCTGCCTTCTGATTTACAGTCGACGCCAACATCCCAACCGGGAT
TTCGCTCCCTCCTATCATTAGCGAAACAATCGATTGTCTATGTAAAGGTT
TCTGGGTTATATCGTATGTCAAATTGCTTAGCCTCGACCTTTGATGACCT
GCAGCCGATCGTTCAAGTAATGGCCAGCGAGATTTCTAATCAGATTATTT
GGGGGAGCGATTGGCCGCACACGGGCGATGGACATGAGCGGGTTAAACAC
TCAATAGAAAACAAAGAACCGTTCAGGACGATCGACAACCATGCAATCCT
CCAAAGATTGTATGACTGGATGGGAGATGATGCCTACTGGAAGATGATGG
TGGATAACCCAGGCCGGCTGTATATGGATTGAATGTTAATATCAAAGCTA
AGTCTTTCGCGTGGATGCCTACCACGATTCATGGTTTACCAACGGGCTAC
CTACACAATGCTGTCACAAGCTCTAGCTACCCATGAAAGGCGCTCCAATA
CACCATTCCTTCTCTCAAAAGAGTCATTTGACACACATGTACACGTCTTC
GATCCCAAGCTTGGCCCATATGCGGCCGGGCGAGCATACACTCCGGAGGA
CGCGCCGTTGCAAAAGTTACTAGCATTAAATCAGAGTCTTACAAGGAGCT
ACAACAACACTACCCTGGTGTTGGTTCAGCCATCACCTTACAAGACTGAC
TGTTCGGTTATGATGCATTGCCTGCGTGAATTGAAGGACCGAGGCATCAG
CTCGTTCGGAATTGCAGTGTTAGATCTTAACTCTACTACCAATGCGCAAT
TAAGCGAATTGCACGCCCTTGGAGTGCGAGGTGTTCGATTAAACTTCCAA
GCAGATGGGAAAGAAGTCGACATTACGCATTTAGTAGCTATTCTGAATCA
TACTGCAGACCGCATACGCCATCTTCCCGGCTGGGCGATCCAGTTGTTCG
TTCCAGGGTGGACATGGGACCTCCTGTATGATGCTGTTCGTGAGCTTCCC
GTACGGGTTATTGCAGACCATCTAGGTGGCATGCGTGGCGCATCTAAGCT
GCCTTCTGATTTACAGTCGACGCCAACATCCCAACCGGGATTTCGCTCCC
TCCTATCATTAGCGAAACAATCGATTGTCTATGTAAAGGTTTCTGGGTTA
TATCGTATGTCAAATTGCTTAGCCTCGACCTTTGATGACCTGCAGCCGAT
CGTTCAAGTAATGGCCAGCGAGATTTCTAATCAGATTATTTGGGGGAGCG
ATTGGCCGCACACGGGCGATGGACATGAGCGGGTTAAACACTCAATAGAA
AACAAAGAACCGTTCAGGACGATCGACAACCATGCAATCCTCCAAAGATT
GTATGACTGGATGGGAGATGATGCCTACTGGAAGATGATGGTGGATAACC
CAGGCCGGCTGTATATGGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005686-T1.utr5p1 | KJC3_005686-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR006680 |
| DBxref | PFAM:PF04909 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3433845..3435015 + |
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