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KJC3_005696-T1, KJC3_005696-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005696-T1
Unique NameKJC3_005696-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3454191..3455575-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005696-T1 ID=KJC3_005696-T1|Name=KJC3_005696-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1385bp|location=Sequence derived from alignment at ch4:3454191..3455575- (Aspergillus niger KJC3)
CTTCTGCTTTACAAATAACACCTTTCGATTCAGAGAATCTGAAGTCTTTC
TCTGACATTACTATCTTACCCACAATGGCGTCAAAAGACCTCCCTCCTTC
GACCGCTCCCTTCTTTCCCAACGTCTTCTTTTATAACCAATTCTGTGCCA
AACCCAATTGGCCACCCGCAACCACAAATCTCTCTGGTCAAGTGGCCATA
ATCACCGGAGGGAATACTGGCCTGGGATTTGAGTGTGCATTTCAGCTTCT
ATCTCTTCAGCTTAGCCACTTGATCCTCGCCGTTCGCTCTCTCGAAAAGG
GCGAAGCCGCAGCGGCCAAGCTTCGGGCCGTTAATCCCACGTCAACAATA
GATGTCTGGCCACTTGACATGAGCTCATATGACTCCATACAAAGCTTTGC
AAAGCGGGTCGAAAACCACCTTTCCCGCCTAGATATCGCTATCCTCAATG
CTGGGGTGAGACAAGCCCAGTTCACCACCAATCCAAGCACCGGCCACGAG
GAAACCATTCAAGTCAACTATCTCTCCACCATGCTTCTCGCTATCCTCCT
CCTTCCAAGCTTGAGGGACAAATCTCCGAAAGGAGTGCCAGGGCGATTAA
CTATCGTCAGCGCGGCACTATCGCTCCTGCCAAGCTTACCAAATGTGAAG
GATGCGCCACTTCTGAAGTTGTTCGATCGTCCAGATACATATGATGCCAA
TGGCATTTACTGCATGTCGAAGCTTCTCGCTCATGCGTTTCTCTACAAGT
TGGTTGAATATGTCGGTGCAGATGATGTGATTGTGAACCTGGCAGATCCG
GCCTTCGTCAAGGGCACTGACCTGAGCCGGGATTCGCCTGGCCTTGCGAA
GGCTGGGCTAGCAGTGTTTGGGGTTTTGATGGGGAGGACAGTCAAGGTTG
GTGCATCGACGTTTATTGATGCTGCCGTGTTGAAGGGGAAGGAGTCGCAT
GGGTGCTTCCTTATGAGTTGGAAGATTGAACCGTAAGTATTCCCAACTTT
CCTTTGAATTTTTCACGTCATGGCTGACACACGTATGTTCAGGTTTAATG
CGTCATTGTATACTCCAGAGGGGAAACAATCTATTGAACAGCTGTGGCAG
GAGACGATGGATGAACTTGATTTTGCTGGTGTTCGAAGGATACTTGAGAC
TCTGTAAATTTTTAGAAGGGAGCAAACAAATAAACGCTCAGTCACCTCTT
TTAATGCTTGTTTACCAAGCTCGATTCGGACTTGCTATGTCTGCAAAATT
ATAATGTTGGCAGCAACAGACTGAAATTGGCCCTAGGGATTGATGAAAAA
TTGGATCGGCAAAGTGCAGAAGAAATCCCCATCTGCAGCCTGTGCTTTAT
GAGGATCCATTCAAACTTTGAATATGTTCTGCATA
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Coding sequence (CDS) from alignment at ch4:3454191..3455575-

>KJC3_005696-T1 ID=KJC3_005696-T1|Name=KJC3_005696-T1|organism=Aspergillus niger KJC3|type=CDS|length=2046bp|location=Sequence derived from alignment at ch4:3454191..3455575- (Aspergillus niger KJC3)
GTTTAATGCGTCATTGTATACTCCAGAGGGGAAACAATCTATTGAACAGC
TGTGGCAGGAGACGATGGATGAACTTGATTTTGCTGGTGTTCGAAGGATA
CTTGAGACTCTGTAAATGGCGTCAAAAGACCTCCCTCCTTCGACCGCTCC
CTTCTTTCCCAACGTCTTCTTTTATAACCAATTCTGTGCCAAACCCAATT
GGCCACCCGCAACCACAAATCTCTCTGGTCAAGTGGCCATAATCACCGGA
GGGAATACTGGCCTGGGATTTGAGTGTGCATTTCAGCTTCTATCTCTTCA
GCTTAGCCACTTGATCCTCGCCGTTCGCTCTCTCGAAAAGGGCGAAGCCG
CAGCGGCCAAGCTTCGGGCCGTTAATCCCACGTCAACAATAGATGTCTGG
CCACTTGACATGAGCTCATATGACTCCATACAAAGCTTTGCAAAGCGGGT
CGAAAACCACCTTTCCCGCCTAGATATCGCTATCCTCAATGCTGGGGTGA
GACAAGCCCAGTTCACCACCAATCCAAGCACCGGCCACGAGGAAACCATT
CAAGTCAACTATCTCTCCACCATGCTTCTCGCTATCCTCCTCCTTCCAAG
CTTGAGGGACAAATCTCCGAAAGGAGTGCCAGGGCGATTAACTATCGTCA
GCGCGGCACTATCGCTCCTGCCAAGCTTACCAAATGTGAAGGATGCGCCA
CTTCTGAAGTTGTTCGATCGTCCAGATACATATGATGCCAATGGCATTTA
CTGCATGTCGAAGCTTCTCGCTCATGCGTTTCTCTACAAGTTGGTTGAAT
ATGTCGGTGCAGATGATGTGATTGTGAACCTGGCAGATCCGGCCTTCGTC
AAGGGCACTGACCTGAGCCGGGATTCGCCTGGCCTTGCGAAGGCTGGGCT
AGCAGTGTTTGGGGTTTTGATGGGGAGGACAGTCAAGGTTGGTGCATCGA
CGTTTATTGATGCTGCCGTGTTGAAGGGGAAGGAGTCGCATGGGTGCTTC
CTTATGAGTTGGAAGATTGAACCGTTTAATGCGTCATTGTATACTCCAGA
GGGGAAACAATCTATTGAACAGCTGTGGCAGGAGACGATGGATGAACTTG
ATTTTGCTGGTGTTCGAAGGATACTTGAGACTCTGTAAATGGCGTCAAAA
GACCTCCCTCCTTCGACCGCTCCCTTCTTTCCCAACGTCTTCTTTTATAA
CCAATTCTGTGCCAAACCCAATTGGCCACCCGCAACCACAAATCTCTCTG
GTCAAGTGGCCATAATCACCGGAGGGAATACTGGCCTGGGATTTGAGTGT
GCATTTCAGCTTCTATCTCTTCAGCTTAGCCACTTGATCCTCGCCGTTCG
CTCTCTCGAAAAGGGCGAAGCCGCAGCGGCCAAGCTTCGGGCCGTTAATC
CCACGTCAACAATAGATGTCTGGCCACTTGACATGAGCTCATATGACTCC
ATACAAAGCTTTGCAAAGCGGGTCGAAAACCACCTTTCCCGCCTAGATAT
CGCTATCCTCAATGCTGGGGTGAGACAAGCCCAGTTCACCACCAATCCAA
GCACCGGCCACGAGGAAACCATTCAAGTCAACTATCTCTCCACCATGCTT
CTCGCTATCCTCCTCCTTCCAAGCTTGAGGGACAAATCTCCGAAAGGAGT
GCCAGGGCGATTAACTATCGTCAGCGCGGCACTATCGCTCCTGCCAAGCT
TACCAAATGTGAAGGATGCGCCACTTCTGAAGTTGTTCGATCGTCCAGAT
ACATATGATGCCAATGGCATTTACTGCATGTCGAAGCTTCTCGCTCATGC
GTTTCTCTACAAGTTGGTTGAATATGTCGGTGCAGATGATGTGATTGTGA
ACCTGGCAGATCCGGCCTTCGTCAAGGGCACTGACCTGAGCCGGGATTCG
CCTGGCCTTGCGAAGGCTGGGCTAGCAGTGTTTGGGGTTTTGATGGGGAG
GACAGTCAAGGTTGGTGCATCGACGTTTATTGATGCTGCCGTGTTGAAGG
GGAAGGAGTCGCATGGGTGCTTCCTTATGAGTTGGAAGATTGAACC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005696KJC3_005696Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005696-T1KJC3_005696-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005696-T1.cdsKJC3_005696-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005696-T1.utr3p1KJC3_005696-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005696-T1.exon2KJC3_005696-T1.exon2Aspergillus niger KJC3exon
KJC3_005696-T1.exon1KJC3_005696-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005696-T1.utr5p1KJC3_005696-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.6
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3454191..3455575 -
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