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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3471567..3472670- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005702-T1 ID=KJC3_005702-T1|Name=KJC3_005702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1104bp|location=Sequence derived from alignment at ch4:3471567..3472670- (Aspergillus niger KJC3)
ATGTCGGAATCTTCTACACCTTTACGACAGTCAAGTCCGCTTGGGATGCA
TCGAAAGACCCAAGGCAAAAAGCAAACAGCTAAGGACCAGTCAAAGTCTA
TGTCACCGATGACACCACCTACGGTGGAGGCTCAGTATGGAGGCAATGAC
AACTCTGGCGTCCTACAAGTATTCCCGTCCGTGTGGTTGCCATATCTACA
GCTGGTTCGCTTATGGCCTCCAGCCGCCCTCCTGCTCATTTTCTTCCCGC
ACGCGTTTGGCATCCTGCATGCGGCAATAAAAACCCAGGCACCAGCGGAG
TACGTCTTGCGAACCAGCATTACAATTTTTGGGGGCTGCTTCTTCTTCTC
CAATGCAGCTCACACATGGAATGACTTGATCGACGCACCCTTGGACGCCC
AAGTGGAACGGACCCGCAAAAGACCCATTCCTCGTGGTTCCATCACACCT
AAAGCAGCCAATCTCTTCGGCGCCACACAGGTGCTAGGTGCCGTCATCTT
TCTCGCATGCATGCCGTTAGGACTATGGACTTCCGGTTTATACGCCTTGC
CTAACATCATCAGTACGACCTATTACCCGTTCGCTAAGCGGCATACTCGG
TTCCCACAGCTCGTACTCGGGTTTTGCCTCGCATGGGGTGTGGTCATGGG
GGAGCTGGCTATGGGAGTGCAGCCCTTAGCTTACTCCCCGGACGCAGCCG
GTATCACTGTCGACACTTCGGTCATCTTCCTCGTAACGGGAACTGCTTTG
TGGGTACTCATCTATGACACCATCTACGCACATCAGGACCTTCAAGCCGA
TCTGAAAGTTGGTATCAAGAGTTTAGCAGTGCTGTTGCAAGATCGTACCA
AAGCGGTGTTGTGGCCCGTCCTGCTGCTTATGACCGGCCTTCTGGTGGAA
GCTGGCCGAGCGAGTGGGCTGGGGACATCGTATCACCTGTTTGCCGTGGG
CGGGGCCAGTTTGTCTCTCGGTCTTATGGTGTGGTGTGTAGACCTGCAGG
ATAGTCGGAGTTGTTGGTGGTGGTTTAGCAACGGCTTCTGGTGGACTGGA
GGGACTATTATGATCGGGCTGCTTGTGGAATATTCCATGCAGGTCAGATT
TTAG back to topCoding sequence (CDS) from alignment at ch4:3471567..3472670- >KJC3_005702-T1 ID=KJC3_005702-T1|Name=KJC3_005702-T1|organism=Aspergillus niger KJC3|type=CDS|length=1104bp|location=Sequence derived from alignment at ch4:3471567..3472670- (Aspergillus niger KJC3)
ATGTCGGAATCTTCTACACCTTTACGACAGTCAAGTCCGCTTGGGATGCA
TCGAAAGACCCAAGGCAAAAAGCAAACAGCTAAGGACCAGTCAAAGTCTA
TGTCACCGATGACACCACCTACGGTGGAGGCTCAGTATGGAGGCAATGAC
AACTCTGGCGTCCTACAAGTATTCCCGTCCGTGTGGTTGCCATATCTACA
GCTGGTTCGCTTATGGCCTCCAGCCGCCCTCCTGCTCATTTTCTTCCCGC
ACGCGTTTGGCATCCTGCATGCGGCAATAAAAACCCAGGCACCAGCGGAG
TACGTCTTGCGAACCAGCATTACAATTTTTGGGGGCTGCTTCTTCTTCTC
CAATGCAGCTCACACATGGAATGACTTGATCGACGCACCCTTGGACGCCC
AAGTGGAACGGACCCGCAAAAGACCCATTCCTCGTGGTTCCATCACACCT
AAAGCAGCCAATCTCTTCGGCGCCACACAGGTGCTAGGTGCCGTCATCTT
TCTCGCATGCATGCCGTTAGGACTATGGACTTCCGGTTTATACGCCTTGC
CTAACATCATCAGTACGACCTATTACCCGTTCGCTAAGCGGCATACTCGG
TTCCCACAGCTCGTACTCGGGTTTTGCCTCGCATGGGGTGTGGTCATGGG
GGAGCTGGCTATGGGAGTGCAGCCCTTAGCTTACTCCCCGGACGCAGCCG
GTATCACTGTCGACACTTCGGTCATCTTCCTCGTAACGGGAACTGCTTTG
TGGGTACTCATCTATGACACCATCTACGCACATCAGGACCTTCAAGCCGA
TCTGAAAGTTGGTATCAAGAGTTTAGCAGTGCTGTTGCAAGATCGTACCA
AAGCGGTGTTGTGGCCCGTCCTGCTGCTTATGACCGGCCTTCTGGTGGAA
GCTGGCCGAGCGAGTGGGCTGGGGACATCGTATCACCTGTTTGCCGTGGG
CGGGGCCAGTTTGTCTCTCGGTCTTATGGTGTGGTGTGTAGACCTGCAGG
ATAGTCGGAGTTGTTGGTGGTGGTTTAGCAACGGCTTCTGGTGGACTGGA
GGGACTATTATGATCGGGCTGCTTGTGGAATATTCCATGCAGGTCAGATT
TTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR030470 |
| DBxref | InterPro:IPR000537 |
| DBxref | PFAM:PF01040 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3471567..3472670 - |
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