You are here

Home

KJC3_005709-T1, KJC3_005709-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005709-T1
Unique NameKJC3_005709-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3492133..3493895-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005709-T1 ID=KJC3_005709-T1|Name=KJC3_005709-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1763bp|location=Sequence derived from alignment at ch4:3492133..3493895- (Aspergillus niger KJC3)
CTTAATTTTCCAGCTGGAGACAAAATGTAGCTGCTTATGAATCAACCTGA
TAACTCAATTTAGTGCCTTGTTTGGGAAGTCTGCTTTTTGCGATGGGCAT
ATTTATACCCATGTCTCGAGCTCGCTCAGAGCAGAGCTAGCATGGCTGCT
GAGTGTGAATCAACAACGGATCATGAAAGAACAGTGTCCTGAGGACCAGC
GACCTCAAGATGTCGATCGTCAGGGTCGACAGCGCCCACGCATCTTCCCT
AACCTGGTCATTGAGATCGGATTCTGCGTGGCCCTTCTGTTGTCCCAGAT
TATGTCGGTAAGTCCGTATCAACTATCCCGCCCAGTCTTCAGCTCATCTC
ACATTATGGTAGGAATTCTTCATCTCCGGCTTCAACGTCCTCATCCCATC
TGTCTCTCAAAGCCTGAATATCCCCGCCGCATCCACCGGCTGGCCCTCCA
GCGCCTTCGCTCTCACCGCTGGCAGCTCCCTTCTCCTCTTCGGGCAGCTG
GCCGACAAATACGGCGGCTTCGTGGTCTTCACATCCGGCCTAACATGGCA
CCTCGTCTGGACGCTCATAGCAGGGTTCTCCCAAAACGAAATCATGCTCA
ACTTCTGTCGTGCCCTGCAAGGCTTCGGCCCCGCCGCCATCCTCTCTGCA
GGCATCATGCTGCTGGGTTCGATCTACCCTCCGGGTCCCCGCAAGAACAT
CGTCTTTAGCATCTACGGCGGCTGCGCCCCCATAGGTTTCTCCGCAGGCA
TCCTCGTCTCCGGAATCGCCGACCAACTCCTCACCTGGCGCTGGTACTTC
TGGATCGGCGCCATCCTGATCCTCATTACCCTCGTAGCCGCCCTAATCTT
CATTCCCACTCCGATCCGCACACAACGACCCAACCCAACCCTCAAGATTG
ACTACCTCGGCGCCACTCTCTTCATCTCTAGCCTCATCCTGATCTTCTTC
GCCGTCAACGACTGCGGCCACGCCCCTAACGGCTGGCGCACACCTTACAT
CCCCGTGACCTTGGTGATCGGCTGCATCCTCCTCGCAGGGGCAATCTACA
CAGAATACCGCCTCACCTCAGCCTCCTCCGACACAGACGACAGCCAAAAC
GCAACCCCAACCCCAATCCTCCCGCTAACCCTCTTCCGAGTCCCTCACCT
CCCCGCTCTCCTCATCGCCCTCTTCCTCTTCTACGGCACCTTCGGCATCT
GGCTCCTCTACACAGTAACCTACATGCAGAATATCCTGCACATCTCCCCC
CTAATGGTGGTAGTATGGTACCTCCCCTTCGCGCTGGGAGGCATTGTCCT
CAGCTTCGTCGGCGGTACAATCCTCCACATCGTCCCGGGGACTATCCTCC
TCATCCTCTCGGGCATAGGATGGGTCATGGCGCCGCTCCTCTTCGCTATT
CTTCCTAAGGAAGGGGTAAGTTACTGGGCGTATATTTTCCCTGCGATGAT
TTGTGGTACCGTGGGCGTGGATATCACGTATAATATAACCAATGTGTTCC
TTACCACGACGTTGCCGGAGAAGCAGCAGGGGTTGGCGGCCGCGGTGGCG
AATAGTGTGTTGTTCTTGGGCGTGAGTTTCTTTGTTGGGTGGGGGGATTT
TGTTGCTGAGATGGTGGAGGGCCAGAGGGAGGGGTATAAGGCTGCTTTCT
GGTTGGGGGTTGCGTGTGCTGGCATTGCGTTGACGATTTTGTTCGGGTGG
GTGAAGATTGAGGCTGCCAAGGGGGAGGAGGGGAAGGATGAGACTGAGGA
AGGGGGTGGGTGA
back to top

Coding sequence (CDS) from alignment at ch4:3492133..3493895-

>KJC3_005709-T1 ID=KJC3_005709-T1|Name=KJC3_005709-T1|organism=Aspergillus niger KJC3|type=CDS|length=3072bp|location=Sequence derived from alignment at ch4:3492133..3493895- (Aspergillus niger KJC3)
GAATTCTTCATCTCCGGCTTCAACGTCCTCATCCCATCTGTCTCTCAAAG
CCTGAATATCCCCGCCGCATCCACCGGCTGGCCCTCCAGCGCCTTCGCTC
TCACCGCTGGCAGCTCCCTTCTCCTCTTCGGGCAGCTGGCCGACAAATAC
GGCGGCTTCGTGGTCTTCACATCCGGCCTAACATGGCACCTCGTCTGGAC
GCTCATAGCAGGGTTCTCCCAAAACGAAATCATGCTCAACTTCTGTCGTG
CCCTGCAAGGCTTCGGCCCCGCCGCCATCCTCTCTGCAGGCATCATGCTG
CTGGGTTCGATCTACCCTCCGGGTCCCCGCAAGAACATCGTCTTTAGCAT
CTACGGCGGCTGCGCCCCCATAGGTTTCTCCGCAGGCATCCTCGTCTCCG
GAATCGCCGACCAACTCCTCACCTGGCGCTGGTACTTCTGGATCGGCGCC
ATCCTGATCCTCATTACCCTCGTAGCCGCCCTAATCTTCATTCCCACTCC
GATCCGCACACAACGACCCAACCCAACCCTCAAGATTGACTACCTCGGCG
CCACTCTCTTCATCTCTAGCCTCATCCTGATCTTCTTCGCCGTCAACGAC
TGCGGCCACGCCCCTAACGGCTGGCGCACACCTTACATCCCCGTGACCTT
GGTGATCGGCTGCATCCTCCTCGCAGGGGCAATCTACACAGAATACCGCC
TCACCTCAGCCTCCTCCGACACAGACGACAGCCAAAACGCAACCCCAACC
CCAATCCTCCCGCTAACCCTCTTCCGAGTCCCTCACCTCCCCGCTCTCCT
CATCGCCCTCTTCCTCTTCTACGGCACCTTCGGCATCTGGCTCCTCTACA
CAGTAACCTACATGCAGAATATCCTGCACATCTCCCCCCTAATGGTGGTA
GTATGGTACCTCCCCTTCGCGCTGGGAGGCATTGTCCTCAGCTTCGTCGG
CGGTACAATCCTCCACATCGTCCCGGGGACTATCCTCCTCATCCTCTCGG
GCATAGGATGGGTCATGGCGCCGCTCCTCTTCGCTATTCTTCCTAAGGAA
GGGGTAAGTTACTGGGCGTATATTTTCCCTGCGATGATTTGTGGTACCGT
GGGCGTGGATATCACGTATAATATAACCAATGTGTTCCTTACCACGACGT
TGCCGGAGAAGCAGCAGGGGTTGGCGGCCGCGGTGGCGAATAGTGTGTTG
TTCTTGGGCGTGAGTTTCTTTGTTGGGTGGGGGGATTTTGTTGCTGAGAT
GGTGGAGGGCCAGAGGGAGGGGTATAAGGCTGCTTTCTGGTTGGGGGTTG
CGTGTGCTGGCATTGCGTTGACGATTTTGTTCGGGTGGGTGAAGATTGAG
GCTGCCAAGGGGGAGGAGGGGAAGGATGAGACTGAGGAAGGGGGTGGGTG
AATGAAAGAACAGTGTCCTGAGGACCAGCGACCTCAAGATGTCGATCGTC
AGGGTCGACAGCGCCCACGCATCTTCCCTAACCTGGTCATTGAGATCGGA
TTCTGCGTGGCCCTTCTGTTGTCCCAGATTATGTCGGAATTCTTCATCTC
CGGCTTCAACGTCCTCATCCCATCTGTCTCTCAAAGCCTGAATATCCCCG
CCGCATCCACCGGCTGGCCCTCCAGCGCCTTCGCTCTCACCGCTGGCAGC
TCCCTTCTCCTCTTCGGGCAGCTGGCCGACAAATACGGCGGCTTCGTGGT
CTTCACATCCGGCCTAACATGGCACCTCGTCTGGACGCTCATAGCAGGGT
TCTCCCAAAACGAAATCATGCTCAACTTCTGTCGTGCCCTGCAAGGCTTC
GGCCCCGCCGCCATCCTCTCTGCAGGCATCATGCTGCTGGGTTCGATCTA
CCCTCCGGGTCCCCGCAAGAACATCGTCTTTAGCATCTACGGCGGCTGCG
CCCCCATAGGTTTCTCCGCAGGCATCCTCGTCTCCGGAATCGCCGACCAA
CTCCTCACCTGGCGCTGGTACTTCTGGATCGGCGCCATCCTGATCCTCAT
TACCCTCGTAGCCGCCCTAATCTTCATTCCCACTCCGATCCGCACACAAC
GACCCAACCCAACCCTCAAGATTGACTACCTCGGCGCCACTCTCTTCATC
TCTAGCCTCATCCTGATCTTCTTCGCCGTCAACGACTGCGGCCACGCCCC
TAACGGCTGGCGCACACCTTACATCCCCGTGACCTTGGTGATCGGCTGCA
TCCTCCTCGCAGGGGCAATCTACACAGAATACCGCCTCACCTCAGCCTCC
TCCGACACAGACGACAGCCAAAACGCAACCCCAACCCCAATCCTCCCGCT
AACCCTCTTCCGAGTCCCTCACCTCCCCGCTCTCCTCATCGCCCTCTTCC
TCTTCTACGGCACCTTCGGCATCTGGCTCCTCTACACAGTAACCTACATG
CAGAATATCCTGCACATCTCCCCCCTAATGGTGGTAGTATGGTACCTCCC
CTTCGCGCTGGGAGGCATTGTCCTCAGCTTCGTCGGCGGTACAATCCTCC
ACATCGTCCCGGGGACTATCCTCCTCATCCTCTCGGGCATAGGATGGGTC
ATGGCGCCGCTCCTCTTCGCTATTCTTCCTAAGGAAGGGGTAAGTTACTG
GGCGTATATTTTCCCTGCGATGATTTGTGGTACCGTGGGCGTGGATATCA
CGTATAATATAACCAATGTGTTCCTTACCACGACGTTGCCGGAGAAGCAG
CAGGGGTTGGCGGCCGCGGTGGCGAATAGTGTGTTGTTCTTGGGCGTGAG
TTTCTTTGTTGGGTGGGGGGATTTTGTTGCTGAGATGGTGGAGGGCCAGA
GGGAGGGGTATAAGGCTGCTTTCTGGTTGGGGGTTGCGTGTGCTGGCATT
GCGTTGACGATTTTGTTCGGGTGGGTGAAGATTGAGGCTGCCAAGGGGGA
GGAGGGGAAGGATGAGACTGAGGAAGGGGGTGGGTGAATGAAAGAACAGT
GTCCTGAGGACCAGCGACCTCAAGATGTCGATCGTCAGGGTCGACAGCGC
CCACGCATCTTCCCTAACCTGGTCATTGAGATCGGATTCTGCGTGGCCCT
TCTGTTGTCCCAGATTATGTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005709KJC3_005709Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005709-T1KJC3_005709-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005709-T1.cdsKJC3_005709-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005709-T1.exon2KJC3_005709-T1.exon2Aspergillus niger KJC3exon
KJC3_005709-T1.exon1KJC3_005709-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005709-T1.utr5p1KJC3_005709-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3492133..3493895 -
Powered by Drupal