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KJC3_005713-T1, KJC3_005713-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005713-T1
Unique NameKJC3_005713-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3501500..3502452+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005713-T1 ID=KJC3_005713-T1|Name=KJC3_005713-T1|organism=Aspergillus niger KJC3|type=mRNA|length=953bp|location=Sequence derived from alignment at ch4:3501500..3502452+ (Aspergillus niger KJC3)
CTTTCACCCCCTCCATTTAAGACATCTTTGTGTTCTTTCAGACTTGTCTA
TAATTACCTCTCTCACTCTATATCCCAGCCCAGTGTATAAACTTTAGAAA
TGTGGTATGAAACCATACCCCTCACCCTTACCCTCACCCTCACCCTCTCT
ACCTGAACTCAACTCACCAAAATCCTCAACTCAGTAAACACATCCTGAAC
GCCCAAGTGGCCATCCGCTCTCCTTGCTGTAAGCCCCCCTTCCCTCTCTC
AAACACCCCCATCAAACCGGATCTAACATTCCCTGCGTGCGCCAGGCAAA
AAATGGTTCGACTGCGCCGAATGCCACCAAGAACAAGAATCCCACACCCT
CACCAAAACCACTGAAATGGTACCTACACGAACCAAACCTCCTACCACAA
GCCTCAATCACCAACCGAAATCCAAATCTAGGTCTTTGCGTGCAAGAAAT
GCAAGAAATGTTTCCGGAAAGACGCGACGGAGTTTGATGAGAGGTGCGTT
GTCGTCGTCACCCGCCCCCACACCCGCCCTTCTTGGATAAACCGGAGGGG
CTATCTATAAAAAGAGAGAGAGATAGGGGGAGGGGTAGTTACAGAATGGG
TCGTTTATTGACTTGAACCTATTTCTGGGTCTAGTGACGAGTACTGCCCG
CACTGCGATAACCATTTCGTGATCGAGGCCGTTACGCCGACTCCGACATT
GCAGGTCGAGGGTGAGGATGCGAGGATTGACTCGAGGTGAGATGCCAAAC
CCCTCTACCTTCCGATTTTGTCTGGGGACTGACTGACGAACTTTGTTCGT
GTAGAATGCTCAAAGACGACCGTGTTCGCGGACACCAGGAACGCTCCATC
TTCAACTTCAAAGATATTTCCGATCGCTTGGGTTAAGACGCCAGACCAAG
ACAACAAACAAGACAAACCGATGGGTTGATGAACGAGATTTACGAAATTA
TGC
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Coding sequence (CDS) from alignment at ch4:3501500..3502452+

>KJC3_005713-T1 ID=KJC3_005713-T1|Name=KJC3_005713-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch4:3501500..3502452+ (Aspergillus niger KJC3)
ATGTGTAAACACATCCTGAACGCCCAAGTGGCCATCCGCTCTCCTTGCTG
CAAAAAATGGTTCGACTGCGCCGAATGCCACCAAGAACAAGAATCCCACA
CCCTCACCAAAACCACTGAAATGGTCTTTGCGTGCAAGAAATGCAAGAAA
TGTTTCCGGAAAGACGCGACGGAGTTTGATGAGAGTGACGAGTACTGCCC
GCACTGCGATAACCATTTCGTGATCGAGGCCGTTACGCCGACTCCGACAT
TGCAGGTCGAGGGTGAGGATGCGAGGATTGACTCGAGAATGCTCAAAGAC
GACCGTGTTCGCGGACACCAGGAACGCTCCATCTTCAACTTCAAAGATAT
TTCCGATCGCTTGGGTTAAATGTGTAAACACATCCTGAACGCCCAAGTGG
CCATCCGCTCTCCTTGCTGCAAAAAATGGTTCGACTGCGCCGAATGCCAC
CAAGAACAAGAATCCCACACCCTCACCAAAACCACTGAAATGGTCTTTGC
GTGCAAGAAATGCAAGAAATGTTTCCGGAAAGACGCGACGGAGTTTGATG
AGAGTGACGAGTACTGCCCGCACTGCGATAACCATTTCGTGATCGAGGCC
GTTACGCCGACTCCGACATTGCAGGTCGAGGGTGAGGATGCGAGGATTGA
CTCGAGAATGCTCAAAGACGACCGTGTTCGCGGACACCAGGAACGCTCCA
TCTTCAACTTCAAAGATATTTCCGATCGCTTGGGTTAAATGTGTAAACAC
ATCCTGAACGCCCAAGTGGCCATCCGCTCTCCTTGCTGCAAAAAATGGTT
CGACTGCGCCGAATGCCACCAAGAACAAGAATCCCACACCCTCACCAAAA
CCACTGAAATGGTCTTTGCGTGCAAGAAATGCAAGAAATGTTTCCGGAAA
GACGCGACGGAGTTTGATGAGAGTGACGAGTACTGCCCGCACTGCGATAA
CCATTTCGTGATCGAGGCCGTTACGCCGACTCCGACATTGCAGGTCGAGG
GTGAGGATGCGAGGATTGACTCGAGAATGCTCAAAGACGACCGTGTTCGC
GGACACCAGGAACGCTCCATCTTCAACTTCAAAGATATTTCCGATCGCTT
GGGTTAAATGTGTAAACACATCCTGAACGCCCAAGTGGCCATCCGCTCTC
CTTGCTGCAAAAAATGGTTCGACTGCGCCGAATGCCACCAAGAACAAGAA
TCCCACACCCTCACCAAAACCACTGAAATGGTCTTTGCGTGCAAGAAATG
CAAGAAATGTTTCCGGAAAGACGCGACGGAGTTTGATGAGAGTGACGAGT
ACTGCCCGCACTGCGATAACCATTTCGTGATCGAGGCCGTTACGCCGACT
CCGACATTGCAGGTCGAGGGTGAGGATGCGAGGATTGACTCGAGAATGCT
CAAAGACGACCGTGTTCGCGGACACCAGGAACGCTCCATCTTCAACTTCA
AAGATATTTCCGATCGCTTGGGTTAAATGTGTAAACACATCCTGAACGCC
CAAGTGGCCATCCGCTCTCCTTGCTGCAAAAAATGGTTCGACTGCGCCGA
ATGCCACCAAGAACAAGAATCCCACACCCTCACCAAAACCACTGAAATGG
TCTTTGCGTGCAAGAAATGCAAGAAATGTTTCCGGAAAGACGCGACGGAG
TTTGATGAGAGTGACGAGTACTGCCCGCACTGCGATAACCATTTCGTGAT
CGAGGCCGTTACGCCGACTCCGACATTGCAGGTCGAGGGTGAGGATGCGA
GGATTGACTCGAGAATGCTCAAAGACGACCGTGTTCGCGGACACCAGGAA
CGCTCCATCTTCAACTTCAAAGATATTTCCGATCGCTTGGGTTAAATGTG
TAAACACATCCTGAACGCCCAAGTGGCCATCCGCTCTCCTTGCTGCAAAA
AATGGTTCGACTGCGCCGAATGCCACCAAGAACAAGAATCCCACACCCTC
ACCAAAACCACTGAAATGGTCTTTGCGTGCAAGAAATGCAAGAAATGTTT
CCGGAAAGACGCGACGGAGTTTGATGAGAGTGACGAGTACTGCCCGCACT
GCGATAACCATTTCGTGATCGAGGCCGTTACGCCGACTCCGACATTGCAG
GTCGAGGGTGAGGATGCGAGGATTGACTCGAGAATGCTCAAAGACGACCG
TGTTCGCGGACACCAGGAACGCTCCATCTTCAACTTCAAAGATATTTCCG
ATCGCTTGGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005713KJC3_005713Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005713-T1KJC3_005713-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005713-T1.utr5p1KJC3_005713-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005713-T1.exon1KJC3_005713-T1.exon1Aspergillus niger KJC3exon
KJC3_005713-T1.exon2KJC3_005713-T1.exon2Aspergillus niger KJC3exon
KJC3_005713-T1.exon3KJC3_005713-T1.exon3Aspergillus niger KJC3exon
KJC3_005713-T1.exon4KJC3_005713-T1.exon4Aspergillus niger KJC3exon
KJC3_005713-T1.exon5KJC3_005713-T1.exon5Aspergillus niger KJC3exon
KJC3_005713-T1.exon6KJC3_005713-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005713-T1.cdsKJC3_005713-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005713-T1.utr3p1KJC3_005713-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037274
DBxrefInterPro:IPR008913
DBxrefPFAM:PF05495
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3501500..3502452 +
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