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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3546286..3550015+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005731-T1 ID=KJC3_005731-T1|Name=KJC3_005731-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3730bp|location=Sequence derived from alignment at ch4:3546286..3550015+ (Aspergillus niger KJC3)
CTCCGTATCGCGGTGAACTCAATCAATCAATGATGCTAAACCCAGACGGT
CACTAGCATCCACCGTTTTAAAATTAAACCCATCCGATCCTCCTCCACTC
GAACCACCTGGACCCTTTGGGCTTCTCCTCCTCCACAGTCCACAGTCCAC
AGTCCACCTTGAGTCCACACAGACACAAGTCCAGTCCTTGAATCGTCGTT
TCCCATCGTGCCGGTGATCATTCATCCCATCCATTCATTTTCCATTCCTC
TCTCTTCTATCTTCTCTCTCTTCTTCCCCTCTCCTCTCTCCTCTCCTCTA
TCCCCACCCCTTTCCCATTCTTCTATTTTTCCTTCTTTCTTTTTTCTATT
TATTTATTTATTTATTCTATTTTTCTCCATCCTACAGACTAGGGATCTCT
CCCAACCTGCACGAAGCAATTTCTATCCCTGTGAAACATGTCTGCAACCT
TTAGGGGGTGGAGACACGCGACCCCCCATTATTTGTTCCAATCCCTTCGC
CCTTGTCTGCTCCTTCACCAAATCACCAGCATGCAACTGGTCTGTTTGGT
GTTCTGATCCTCTCTCCCTTCCTCCACTGTCCCCAGCACTAAACTCACTA
CTTCTGCGCCGCTACTGCACCTCGTGGATTCTACTTTCTCCAGAATCCGT
TGAATGCACCCCTCAGCCCTGGAACAAAAAGAAAATAATACCAGGCTAAA
AAAGCATAAAACCTGTTTTGCTTGCCCAACGGGTGGGTGACTGACGCCAT
TGTATCTTTATTTCTTCTTTTCTACACTTTTCCCTGTCGTCTGCACCTCC
AATGCGCATTGCTTTATAAGCCTCGTGGTGAACTGCTGAATCCGCCCTTT
CTACAATAAAAAGAAAGAAGAATCTCCTCCCCAGCCATGGCGATGGAGAA
GCAGGATCATCAAGTGGTTGCTGGCCAGCATCCGACGCCCATGAAATTTT
CCCGGTACCGTTCCGTGAGAAAAGCCGCGGCGAAACAGCCACCACCACCG
CCGCAATCCTGCCCCCTGCCCCCGCCGCTGCCCATCCCGCCTGTCGCTGC
CGCGCCGCCGTCGCATGACCAGCCAGCACTCCCCAATGGCTCCAGCACCG
TTCAGAGGAGCATGTCGCGCTACCGTCGCAGAGCTCCTACTGCGCAATCC
GCCGATGCCGATGCACAACCTCCCGTCCCAGCCCCTCCCCCGGCGTATAA
AGCGCAAGCCGACGCCAGTGTCAATGGAGGTCCTGTTCACCCGCACTTTC
AGGACTCAGAGGGCGCCGAGATGGTGCGAATGCGAAACAAGCTTGCCAGC
AAACTGGCCGCGCGGGAGAAGCGGCAACAGGAGAAACCGGAGGATGATGA
GGCAGAGCGCGAAAGACATCGACAGAATGCGATGGATCGGCTGACAGGCG
GCGAAGCGAAGTCAGTGTCTACAACTCATTCAAAACCTGCGTCGCGCGAC
AGGTCAGCCGACAAAGCGGAGGAGCATGCGGTTCGTCGTCCTCATAAGGA
ATCGCAGCATCGGAAACCCCAAACTGGATCCGCTTCGGCGAGTCGTCGCG
CGAGCATGGAGCCGAGGCGTCAGTCGGTCAGTGATGCAGCCAACCCAGCG
CATCGCAGAGGAAGTGTACATGGCGATGCATCAGCAGTCCCTGCGATTGA
TACTACGGTGCCCACTCAGTTCCCTGGAATTGATGCGCCTGTATCGGCTG
TCAATGCGCGCGAGCGGCGGGTGCTGGTCCACTACCGGAAATCCTCTACG
CGCATCTGCGTTACTCCCTCCACCTCCGCTCGAGACGTCGTCGCGACTGC
ATTGAAGCAGATGGATGCCGGGGTAGACCCAGAAAAGTTCATCCTGATGG
AGTCGTTCGCTGAGCTGGGGCTGGAACGGCCCTTGCGCCGCTACGAATAT
GTGCGGGATGTGCTGAATTCGTGGACTCACGACGAACAGAACACATTGAT
TGTTGTGCCTGCAGCCAGCCTGGATGCGCTTACCCTGCTCGACGCGCGGA
ACGTGTCACTCGGACCACCGGCGGATGTGACCTTCTACATGTACTACTCG
CAGCGGCCTCGCAAGTGGGATAAACGCTATGTGACGCTCCGGTCCGACGG
CCAAGTGACGGTCTCCAAGAAGGAGAATGCCCAAGATCCAACCAACGCTT
GCCATCTTTCTGATTTCGACATCTACTCCCCTACGGCCAGCTACCTCGCG
AACAATGTCAAGCCGCCCAAAAAGTTCTGCCAGGCTGTCAAGAGCCAGCA
AAAATCCAACATGTTCCTCTCTACGGAGAATTTTGTCCATTTCTTCTCGA
CCAATGACCGCGAGATCGCCGATGGCTGGTACCGGGCCGTCCAAACCTGG
CGCAGCTGGTACCTGGTGACGAAGCTGGGGGCAGGCCAGCCAGCGGAAGC
AGAAGCCATGCAGCCGGACGAGACCCCATTCAAGCCCTTGCTGAACCCCT
TTGAGGAGCCAGCCAACGAGGTAAAACCGTCGCCACCCGCGCCGGAGCGG
AGCAAATCCATGAAGACCAAGGAACTCTTCTCGCACAAAAAGAGCACCCG
CGAGCGCGGGCCTCCACCCACGTCCTTCCCCAAGCTTCTCACCGGCGATT
CCGACCTCGCGACAGGCTCATCCTCGGATGAAGCCCCATTCTCAGCATCC
GGCCTTCTCGGCCGAACCTACACCATGCGCCAACGCGCATTGAAGGAGCG
CGAAGAGCAAGAGAAACGAGACAACGAAGAACTGATCAAACAAGGCCTGA
TCGGCACCATGGGCTCCCGCCACCCCAGCCGCACCAACACCATGACATCC
AGTCACGGCCCAGACCCCAACCTCCCACGACGCACGCAATCCATGAAAAA
CAAACCCCTCGTCGACCTAACCCCCGTCTACCAAGAGCCCCCGCAACACA
TCCGGAAAGGCCGCGGCATCGCCGTCGAACCAGGCCTGCCCCTTATCGAC
GCCGCCACGGGGCCCGAAGCCCCAGGCGGAATTCAAATACCCTCCGCCAC
CACCTGGCGACGACCGCAGGTGCCGCCTGAACCGCCCATGCCGGAGGTCC
GCACTCGCAATCGGTCCAACACTGCCCGCAGTGTCAACAACCAACAGCGG
TACCATCATACCGCTCCGACCACGCCAACAGACGGAGAGAATCTGCGCAG
CCAAGACGGCCCGTTCATCCCTAACAGTCTGTTGGCACGAACTACACCGC
ACCAAAATATACAAGGATCTCCGGTCGGCCATGGCGTGGCAACGGGGGAT
CGCAATGCCGCGAAACCGATGTTGGATATGTCGCCGGACAACCCGTTCGC
AGAGGGGAGTTTGTTACGGGGATTGTGAGGTTTTGATTATACAGCATGTA
AGCTGATTTACGATTACGATCGCATTGGACTTGAGCAGGGCGTTTAGTTT
CTTTGTTTGTTTGTTTTTTCTTCGTATTGTTTGTGTTGGCTTGGCTTACT
TTGTCATTGGTAGTGACACTTCATTTTTCCCTCTTATTTCCTTTTCTAGT
TACTTTACTTTCTACCCCTATTCCCACTTTGTTTGTCTGTTGTATGTTTG
TTTGCTTCCTTCGTGGTAGTCACGTGAGGCGATTCATACTGTTCCCCCCA
TTTGAGCGTGTGCATTCAGCAAAAGTAGAGATACCTTACTTTGAAGCTTT
GGCATAAGCTATTGATCTTATGCCGGTGACGGCATACATACACTTTCTTT
ATCTCTTGTAAGAATGTAAATCGCCTACAG back to topCoding sequence (CDS) from alignment at ch4:3546286..3550015+ >KJC3_005731-T1 ID=KJC3_005731-T1|Name=KJC3_005731-T1|organism=Aspergillus niger KJC3|type=CDS|length=2442bp|location=Sequence derived from alignment at ch4:3546286..3550015+ (Aspergillus niger KJC3)
ATGGCGATGGAGAAGCAGGATCATCAAGTGGTTGCTGGCCAGCATCCGAC
GCCCATGAAATTTTCCCGGTACCGTTCCGTGAGAAAAGCCGCGGCGAAAC
AGCCACCACCACCGCCGCAATCCTGCCCCCTGCCCCCGCCGCTGCCCATC
CCGCCTGTCGCTGCCGCGCCGCCGTCGCATGACCAGCCAGCACTCCCCAA
TGGCTCCAGCACCGTTCAGAGGAGCATGTCGCGCTACCGTCGCAGAGCTC
CTACTGCGCAATCCGCCGATGCCGATGCACAACCTCCCGTCCCAGCCCCT
CCCCCGGCGTATAAAGCGCAAGCCGACGCCAGTGTCAATGGAGGTCCTGT
TCACCCGCACTTTCAGGACTCAGAGGGCGCCGAGATGGTGCGAATGCGAA
ACAAGCTTGCCAGCAAACTGGCCGCGCGGGAGAAGCGGCAACAGGAGAAA
CCGGAGGATGATGAGGCAGAGCGCGAAAGACATCGACAGAATGCGATGGA
TCGGCTGACAGGCGGCGAAGCGAAGTCAGTGTCTACAACTCATTCAAAAC
CTGCGTCGCGCGACAGGTCAGCCGACAAAGCGGAGGAGCATGCGGTTCGT
CGTCCTCATAAGGAATCGCAGCATCGGAAACCCCAAACTGGATCCGCTTC
GGCGAGTCGTCGCGCGAGCATGGAGCCGAGGCGTCAGTCGGTCAGTGATG
CAGCCAACCCAGCGCATCGCAGAGGAAGTGTACATGGCGATGCATCAGCA
GTCCCTGCGATTGATACTACGGTGCCCACTCAGTTCCCTGGAATTGATGC
GCCTGTATCGGCTGTCAATGCGCGCGAGCGGCGGGTGCTGGTCCACTACC
GGAAATCCTCTACGCGCATCTGCGTTACTCCCTCCACCTCCGCTCGAGAC
GTCGTCGCGACTGCATTGAAGCAGATGGATGCCGGGGTAGACCCAGAAAA
GTTCATCCTGATGGAGTCGTTCGCTGAGCTGGGGCTGGAACGGCCCTTGC
GCCGCTACGAATATGTGCGGGATGTGCTGAATTCGTGGACTCACGACGAA
CAGAACACATTGATTGTTGTGCCTGCAGCCAGCCTGGATGCGCTTACCCT
GCTCGACGCGCGGAACGTGTCACTCGGACCACCGGCGGATGTGACCTTCT
ACATGTACTACTCGCAGCGGCCTCGCAAGTGGGATAAACGCTATGTGACG
CTCCGGTCCGACGGCCAAGTGACGGTCTCCAAGAAGGAGAATGCCCAAGA
TCCAACCAACGCTTGCCATCTTTCTGATTTCGACATCTACTCCCCTACGG
CCAGCTACCTCGCGAACAATGTCAAGCCGCCCAAAAAGTTCTGCCAGGCT
GTCAAGAGCCAGCAAAAATCCAACATGTTCCTCTCTACGGAGAATTTTGT
CCATTTCTTCTCGACCAATGACCGCGAGATCGCCGATGGCTGGTACCGGG
CCGTCCAAACCTGGCGCAGCTGGTACCTGGTGACGAAGCTGGGGGCAGGC
CAGCCAGCGGAAGCAGAAGCCATGCAGCCGGACGAGACCCCATTCAAGCC
CTTGCTGAACCCCTTTGAGGAGCCAGCCAACGAGGTAAAACCGTCGCCAC
CCGCGCCGGAGCGGAGCAAATCCATGAAGACCAAGGAACTCTTCTCGCAC
AAAAAGAGCACCCGCGAGCGCGGGCCTCCACCCACGTCCTTCCCCAAGCT
TCTCACCGGCGATTCCGACCTCGCGACAGGCTCATCCTCGGATGAAGCCC
CATTCTCAGCATCCGGCCTTCTCGGCCGAACCTACACCATGCGCCAACGC
GCATTGAAGGAGCGCGAAGAGCAAGAGAAACGAGACAACGAAGAACTGAT
CAAACAAGGCCTGATCGGCACCATGGGCTCCCGCCACCCCAGCCGCACCA
ACACCATGACATCCAGTCACGGCCCAGACCCCAACCTCCCACGACGCACG
CAATCCATGAAAAACAAACCCCTCGTCGACCTAACCCCCGTCTACCAAGA
GCCCCCGCAACACATCCGGAAAGGCCGCGGCATCGCCGTCGAACCAGGCC
TGCCCCTTATCGACGCCGCCACGGGGCCCGAAGCCCCAGGCGGAATTCAA
ATACCCTCCGCCACCACCTGGCGACGACCGCAGGTGCCGCCTGAACCGCC
CATGCCGGAGGTCCGCACTCGCAATCGGTCCAACACTGCCCGCAGTGTCA
ACAACCAACAGCGGTACCATCATACCGCTCCGACCACGCCAACAGACGGA
GAGAATCTGCGCAGCCAAGACGGCCCGTTCATCCCTAACAGTCTGTTGGC
ACGAACTACACCGCACCAAAATATACAAGGATCTCCGGTCGGCCATGGCG
TGGCAACGGGGGATCGCAATGCCGCGAAACCGATGTTGGATATGTCGCCG
GACAACCCGTTCGCAGAGGGGAGTTTGTTACGGGGATTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005731-T1.utr5p1 | KJC3_005731-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005731-T1.utr3p1 | KJC3_005731-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR000159 |
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR001849 |
| DBxref | PFAM:PF00788 |
| DBxref | PFAM:PF00169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3546286..3550015 + |
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