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KJC3_005732-T1, KJC3_005732-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005732-T1
Unique NameKJC3_005732-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3552254..3553554-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005732-T1 ID=KJC3_005732-T1|Name=KJC3_005732-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1301bp|location=Sequence derived from alignment at ch4:3552254..3553554- (Aspergillus niger KJC3)
ATGAGAGCGTCTAGGGTAGGAGCCCAGCTCCCTATCGAACTTACCCTGCT
TGCCGCCGAATATCTTACACCTGTTGACCTGCTCTCTCTCTTATATGCAG
TTCCTGGGCTTGTACGGTCCCTGACTTTTCACCATACCACGCTTCAGGAT
GAAGGAGGGAGGACGATCCTACATCTACTCGCGAGGGACGGCGAATTGCT
GAAGCTACTACTCGCAAACGGCAGTATCAGGCCAGACCCGAAGGATAATT
GTGGCCGGACACCGTTATCTTATGCGGCTGAAGGATATGAAGTGGCGGTC
AAGCTACTGCTAGACCGACAAGATGTTGAAGCAGACTCAAAGGATAACCT
AGGTCGGACACCATTATCCTATGCAGCTGGGAGTGGATATGAAGCAGTGG
TCAGGTTACTGCTGGATCAAGGTGTTGAAGCAGACTCAAAGGATAACCTG
GGTCGGACACCATTGTTATATGCGGCCTGGCACGGACATGAAGCAGTGGT
CAGGCTATTGCTGGACCAAGATGTTGAGGCGAACCTAAAGGATAATGACG
GGTTGACTCCGATATCCTGTGCAGCTGGAGCGGGGCATGGAGCGGTGGTC
AGGCTACTGCTGGACCGACAAGATGTTGAGGCCGACTCAAAGGATAACTT
GGGTCGGACACCATTGTTGTATGCAGCCTGGCGCGGACATGAAGCAGTGG
TCAGGTTACTGCTGGACCGACAAGACGTTGAGGCAGACTCGAAGGCTAAC
TGGGGTCAGACACCATTGTCCTTTGCGGCTGGAGGTGGACATGAAGCAGT
AGTCAGGCTACTGCTGGGCCGACCAGATGTTGAGGCAGACTCGAGGGATA
ACTTGGGTCGGACACCATTATTATATGCAGCCTGGCGCGGACATGAAGCA
GTGGTCAGATTACTGCTGGACCAGCAAGATGTTAAGGTGGACTCCAAGGC
TAACTGGGGTCGGACACCATTATCCTGTGCGACTGAAGGTGGACACGAAG
CAGTCGTCAGGCTACTGCTGGGCCGACAAGATGGCCAGACGGACACGAAG
GATAACTGTTGAAAAAGCACTTGATGGCAGCCTGACAAGCAGTCGAATTA
ACGGAAGAATCGCACACTTATTAGGATCAGTCACAATCGAATGGTTCCTA
CTGCATAAAATAGGAAGCATGGAGAACTAAGTGTGGTTGTGCACTGCTGT
TAGACCCCTGACCCTGTATGTTATATAGATTATTTTATATTCACTCGAAA
GAGTTTGTTTATATTAATTTATATTAAAAATATTTTTTACTTATACCGGA
C
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Coding sequence (CDS) from alignment at ch4:3552254..3553554-

>KJC3_005732-T1 ID=KJC3_005732-T1|Name=KJC3_005732-T1|organism=Aspergillus niger KJC3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch4:3552254..3553554- (Aspergillus niger KJC3)
ATTACTGCTGGACCAGCAAGATGTTAAGGTGGACTCCAAGGCTAACTGGG
GTCGGACACCATTATCCTGTGCGACTGAAGGTGGACACGAAGCAGTCGTC
AGGCTACTGCTGGGCCGACAAGATGGCCAGACGGACACGAAGGATAACTG
TTGAATGAGAGCGTCTAGGGTAGGAGCCCAGCTCCCTATCGAACTTACCC
TGCTTGCCGCCGAATATCTTACACCTGTTGACCTGCTCTCTCTCTTATAT
GCAGTTCCTGGGCTTGTACGGTCCCTGACTTTTCACCATACCACGCTTCA
GGATGAAGGAGGGAGGACGATCCTACATCTACTCGCGAGGGACGGCGAAT
TGCTGAAGCTACTACTCGCAAACGGCAGTATCAGGCCAGACCCGAAGGAT
AATTGTGGCCGGACACCGTTATCTTATGCGGCTGAAGGATATGAAGTGGC
GGTCAAGCTACTGCTAGACCGACAAGATGTTGAAGCAGACTCAAAGGATA
ACCTAGGTCGGACACCATTATCCTATGCAGCTGGGAGTGGATATGAAGCA
GTGGTCAGGTTACTGCTGGATCAAGGTGTTGAAGCAGACTCAAAGGATAA
CCTGGGTCGGACACCATTGTTATATGCGGCCTGGCACGGACATGAAGCAG
TGGTCAGGCTATTGCTGGACCAAGATGTTGAGGCGAACCTAAAGGATAAT
GACGGGTTGACTCCGATATCCTGTGCAGCTGGAGCGGGGCATGGAGCGGT
GGTCAGGCTACTGCTGGACCGACAAGATGTTGAGGCCGACTCAAAGGATA
ACTTGGGTCGGACACCATTGTTGTATGCAGCCTGGCGCGGACATGAAGCA
GTGGTCAGATTACTGCTGGACCAGCAAGATGTTAAGGTGGACTCCAAGGC
TAACTGGGGTCGGACACCATTATCCTGTGCGACTGAAGGTGGACACGAAG
CAGTCGTCAGGCTACTGCTGGGCCGACAAGATGGCCAGACGGACACGAAG
GATAACTGTTGAATGAGAGCGTCTAGGGTAGGAGCCCAGCTCCCTATCGA
ACTTACCCTGCTTGCCGCCGAATATCTTACACCTGTTGACCTGCTCTCTC
TCTTATATGCAGTTCCTGGGCTTGTACGGTCCCTGACTTTTCACCATACC
ACGCTTCAGGATGAAGGAGGGAGGACGATCCTACATCTACTCGCGAGGGA
CGGCGAATTGCTGAAGCTACTACTCGCAAACGGCAGTATCAGGCCAGACC
CGAAGGATAATTGTGGCCGGACACCGTTATCTTATGCGGCTGAAGGATAT
GAAGTGGCGGTCAAGCTACTGCTAGACCGACAAGATGTTGAAGCAGACTC
AAAGGATAACCTAGGTCGGACACCATTATCCTATGCAGCTGGGAGTGGAT
ATGAAGCAGTGGTCAGGTTACTGCTGGATCAAGGTGTTGAAGCAGACTCA
AAGGATAACCTGGGTCGGACACCATTGTTATATGCGGCCTGGCACGGACA
TGAAGCAGTGGTCAGGCTATTGCTGGACCAAGATGTTGAGGCGAACCTAA
AGGATAATGACGGGTTGACTCCGATATCCTGTGCAGCTGGAGCGGGGCAT
GGAGCGGTGGTCAGGCTACTGCTGGACCGACAAGATGTTGAGGCCGACTC
AAAGGATAACTTGGGTCGGACACCATTGTTGTATGCAGCCTGGCGCGGAC
ATGAAGCAGTGGTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005732KJC3_005732Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005732-T1KJC3_005732-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005732-T1.cdsKJC3_005732-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005732-T1.utr3p1KJC3_005732-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005732-T1.exon2KJC3_005732-T1.exon2Aspergillus niger KJC3exon
KJC3_005732-T1.exon1KJC3_005732-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3552254..3553554 -
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