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KJC3_005744-T1, KJC3_005744-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005744-T1
Unique NameKJC3_005744-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3588486..3590459+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005744-T1 ID=KJC3_005744-T1|Name=KJC3_005744-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1974bp|location=Sequence derived from alignment at ch4:3588486..3590459+ (Aspergillus niger KJC3)
CTCCAGAAGCGCTTTATCTGCGAAAGACAGGTAGAGCCTTGTGCGCGCAG
CAAAGATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGC
CTAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATGTAAG
TAACTCTGCAGTCTCTATCTCGTCGCTCTCTGCTAACTCACTCCTTTACT
TTCAGATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTCTTA
AAGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGATGC
AGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATCAAT
TCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAGCGC
TACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCGTCGTCA
GCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCACCG
GTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCATGAAGAC
TACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATACCTCGA
CATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACAACA
AACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTACTTG
GAAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACTTTT
TGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGGTAC
CTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACC
GAGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAA
GAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTCGGG
CCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCC
CCTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACGTGC
AGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGC
CCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATGACT
GAACGGGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAA
CCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAGACC
GAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCAATT
CCCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGA
GATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGCATT
TCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCT
AATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAGGCT
TTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCGACA
ATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGGATC
TACCTTGAGTACGTGCCCCCAACAGTTCCGCGGCCTAATGGAACCTTTAC
TAATGTTTACCAGTCTGCAAAAGCAAGGTATACTGTAATCGGTGACCCCC
GGTCAGCCTTTCTTCATGTTCTTTGCATTGCCTTTCGCTATATTTCATAT
TTGAAAAGCCTGGAGTTTGGTGGGTGTCTTTTCTCGAATTTCCTTACTGC
TGCGTGGTCACTGGGATAGTGTTGGTTGGGAACGGCTATATCAAAGCAAA
GCCAACTCTAGACAGCTTTGCTTTTCATGTATTCTACACCACAAGAATAT
TTCGATATCATCTTCGGGAGCAATTCAAAGCCAAAAGTATCAATTTGATC
TCAACTTTGGCTCGTATCACGTGG
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Coding sequence (CDS) from alignment at ch4:3588486..3590459+

>KJC3_005744-T1 ID=KJC3_005744-T1|Name=KJC3_005744-T1|organism=Aspergillus niger KJC3|type=CDS|length=4554bp|location=Sequence derived from alignment at ch4:3588486..3590459+ (Aspergillus niger KJC3)
ATGATTTTCGAGGAGCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGA
GCAGGCGATTGCCGACCGCGTTGCCGAAGAGCCTCGTAATATTCGGGATC
GCTTGGCTCGCGATCATGAAGTCGCACATTTCTTAAAGCGTATAGAAGAC
CAGTCCAAGAGGTTGCTCGACATCTACAAGGATGCAGACGGCGCGCGTGA
GAAGGAAATCCAAACCATCTCAACCGGCGATCAATTCGAGGAGTTCTACA
AGCAACTGGATGAGATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCA
GTGGAAAACCTTGAACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGA
AGTAACGGGCATGGAGATCGACAATCTATTCACCGGTGAAGAGGGTTATG
GACAGTTTCTGGACCTCACAACACTGCATGAAGACTACCTCAATTTGCCT
GGGGTCAAACGGCTCTCATATGTACAATACCTCGACATATTCGATGCGTT
TACTCCTCCGCAACTTCCGATTAAGCGAAACAACAAACTTTCCGATCGGT
ATTTCAAGTATGTCGGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAG
AAAGTGAAGCCGTTACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGA
GGAGTTCGAGAAGCAATGGACGGCGAATCAGGTACCTGGTTGGACGGAGG
AGGTTGCTGAAAATGGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAA
GGCATCTGGTGTGCTGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTA
TAAGAATCACTTGACAGGCAAAAAGCACATTCGGGCCGCTGAAGCTCGCA
AAGCTGCCGGGGATACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGC
GCATCATCCGTGGCTCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGA
ACATCGGGTGCGTTCTCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGA
CGAGGATGAACGTGGAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAG
ATGGAACTTGAAGCTCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCG
TGCTGGCGATCAATCTGACGAGGACGACGAAGACCGAATCTACAATCCCC
TCAAACTGCCACTTGCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTAC
AAGCTGCATGGCCTGGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTT
TGTGTATATGGGCCGTCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTAC
ATATCTTTGGTTTGAAGTGTCTTGGTATCACTTCTAATACCAACCTTTTC
CGTGAAATCACTCGGATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGA
GCAGGACCGCAAGAAGGATAGAGATAATCGCGACAATGTGGTACAGATGG
AGGACGCCGAAGGCAATGTGATGCCGGAGAGGATCTACCTTGATCTGCAA
AAGCAAGGTATACTGTAAATGATTTTCGAGGAGCAACGGTTTATCCACGA
GGACCTTGAGCGCCTAGAGCAGGCGATTGCCGACCGCGTTGCCGAAGAGC
CTCGTAATATTCGGGATCGCTTGGCTCGCGATCATGAAGTCGCACATTTC
TTAAAGCGTATAGAAGACCAGTCCAAGAGGTTGCTCGACATCTACAAGGA
TGCAGACGGCGCGCGTGAGAAGGAAATCCAAACCATCTCAACCGGCGATC
AATTCGAGGAGTTCTACAAGCAACTGGATGAGATCAAGGACTTCCATAAG
CGCTACCCTAATGAGCCAGTGGAAAACCTTGAACGGGCATATAAGCGTCG
TCAGCCCGGAGAGGGTGAAGTAACGGGCATGGAGATCGACAATCTATTCA
CCGGTGAAGAGGGTTATGGACAGTTTCTGGACCTCACAACACTGCATGAA
GACTACCTCAATTTGCCTGGGGTCAAACGGCTCTCATATGTACAATACCT
CGACATATTCGATGCGTTTACTCCTCCGCAACTTCCGATTAAGCGAAACA
ACAAACTTTCCGATCGGTATTTCAAGTATGTCGGCGAACTTGCAAACTAC
TTGGAAAGCTTCATCAAGAAAGTGAAGCCGTTACAAGATCTGGACAAACT
TTTTGCTAGCTTTGATGAGGAGTTCGAGAAGCAATGGACGGCGAATCAGG
TACCTGGTTGGACGGAGGAGGTTGCTGAAAATGGTAACCAAGGTCCGAAG
ACCGAGGGCTCCGGAGAAGGCATCTGGTGTGCTGACTGCGAGAGGGAGTT
CAAGAATGAGAATGTCTATAAGAATCACTTGACAGGCAAAAAGCACATTC
GGGCCGCTGAAGCTCGCAAAGCTGCCGGGGATACTGGCGCGAAACCGGCA
GCCCCTGCGACGAACGGCGCATCATCCGTGGCTCATCGTCTTAAGGAACG
TGCAGTCGCAGAGAGGGAACATCGGGTGCGTTCTCTGACGCAGGTACTGC
AGCCCGAGCGTGTAGCGACGAGGATGAACGTGGAGCGGAGACAGGGTATG
ACTGAACGGGAGCGCCAGATGGAACTTGAAGCTCTGCTTAATGAGTCTGA
GAACCCTGGCGGTGATCGTGCTGGCGATCAATCTGACGAGGACGACGAAG
ACCGAATCTACAATCCCCTCAAACTGCCACTTGCTTGGGACGGCAAGCCA
ATTCCCTACTGGCTTTACAAGCTGCATGGCCTGGGGGTGGAGTATCCTTG
CGAGATCTGCGGTAACTTTGTGTATATGGGCCGTCGAGCTTTTGACAAGC
ATTTCTCAGAGGCCCTACATATCTTTGGTTTGAAGTGTCTTGGTATCACT
TCTAATACCAACCTTTTCCGTGAAATCACTCGGATTGAGGATGCAATCAG
GCTTTGGGAGAAATTAGAGCAGGACCGCAAGAAGGATAGAGATAATCGCG
ACAATGTGGTACAGATGGAGGACGCCGAAGGCAATGTGATGCCGGAGAGG
ATCTACCTTGATCTGCAAAAGCAAGGTATACTGTAAATGATTTTCGAGGA
GCAACGGTTTATCCACGAGGACCTTGAGCGCCTAGAGCAGGCGATTGCCG
ACCGCGTTGCCGAAGAGCCTCGTAATATTCGGGATCGCTTGGCTCGCGAT
CATGAAGTCGCACATTTCTTAAAGCGTATAGAAGACCAGTCCAAGAGGTT
GCTCGACATCTACAAGGATGCAGACGGCGCGCGTGAGAAGGAAATCCAAA
CCATCTCAACCGGCGATCAATTCGAGGAGTTCTACAAGCAACTGGATGAG
ATCAAGGACTTCCATAAGCGCTACCCTAATGAGCCAGTGGAAAACCTTGA
ACGGGCATATAAGCGTCGTCAGCCCGGAGAGGGTGAAGTAACGGGCATGG
AGATCGACAATCTATTCACCGGTGAAGAGGGTTATGGACAGTTTCTGGAC
CTCACAACACTGCATGAAGACTACCTCAATTTGCCTGGGGTCAAACGGCT
CTCATATGTACAATACCTCGACATATTCGATGCGTTTACTCCTCCGCAAC
TTCCGATTAAGCGAAACAACAAACTTTCCGATCGGTATTTCAAGTATGTC
GGCGAACTTGCAAACTACTTGGAAAGCTTCATCAAGAAAGTGAAGCCGTT
ACAAGATCTGGACAAACTTTTTGCTAGCTTTGATGAGGAGTTCGAGAAGC
AATGGACGGCGAATCAGGTACCTGGTTGGACGGAGGAGGTTGCTGAAAAT
GGTAACCAAGGTCCGAAGACCGAGGGCTCCGGAGAAGGCATCTGGTGTGC
TGACTGCGAGAGGGAGTTCAAGAATGAGAATGTCTATAAGAATCACTTGA
CAGGCAAAAAGCACATTCGGGCCGCTGAAGCTCGCAAAGCTGCCGGGGAT
ACTGGCGCGAAACCGGCAGCCCCTGCGACGAACGGCGCATCATCCGTGGC
TCATCGTCTTAAGGAACGTGCAGTCGCAGAGAGGGAACATCGGGTGCGTT
CTCTGACGCAGGTACTGCAGCCCGAGCGTGTAGCGACGAGGATGAACGTG
GAGCGGAGACAGGGTATGACTGAACGGGAGCGCCAGATGGAACTTGAAGC
TCTGCTTAATGAGTCTGAGAACCCTGGCGGTGATCGTGCTGGCGATCAAT
CTGACGAGGACGACGAAGACCGAATCTACAATCCCCTCAAACTGCCACTT
GCTTGGGACGGCAAGCCAATTCCCTACTGGCTTTACAAGCTGCATGGCCT
GGGGGTGGAGTATCCTTGCGAGATCTGCGGTAACTTTGTGTATATGGGCC
GTCGAGCTTTTGACAAGCATTTCTCAGAGGCCCTACATATCTTTGGTTTG
AAGTGTCTTGGTATCACTTCTAATACCAACCTTTTCCGTGAAATCACTCG
GATTGAGGATGCAATCAGGCTTTGGGAGAAATTAGAGCAGGACCGCAAGA
AGGATAGAGATAATCGCGACAATGTGGTACAGATGGAGGACGCCGAAGGC
AATGTGATGCCGGAGAGGATCTACCTTGATCTGCAAAAGCAAGGTATACT
GTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005744KJC3_005744Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005744-T1KJC3_005744-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005744-T1.utr5p1KJC3_005744-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005744-T1.exon1KJC3_005744-T1.exon1Aspergillus niger KJC3exon
KJC3_005744-T1.exon2KJC3_005744-T1.exon2Aspergillus niger KJC3exon
KJC3_005744-T1.exon3KJC3_005744-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005744-T1.cdsKJC3_005744-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005744-T1.utr3p1KJC3_005744-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR031774
DBxrefInterPro:IPR024598
DBxrefInterPro:IPR021966
DBxrefInterPro:IPR022755
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF12108
DBxrefPFAM:PF16837
DBxrefPFAM:PF11931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3588486..3590459 +
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