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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3619059..3620126- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005755-T1 ID=KJC3_005755-T1|Name=KJC3_005755-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1068bp|location=Sequence derived from alignment at ch4:3619059..3620126- (Aspergillus niger KJC3)
ATGGAGGTTGAGAACCCCAGAGCGGTGACCCCGATAAGTTGGGGTCAGAG
ATCTCCTCAAAATATCAGGAGCAGAGGGCATAAACTTTCCTTTAGGAAAG
ACAAAGCACAGAGGGCAGAAGGTGACGTTCGAGGTTCTCGCGTGGTCGAT
AGGGTTCCTTCCCTTGATCGAGTCGAGTCCGAAAACGTCAGCCAGAGAAA
CCGAGATTCCCAAACTGCTCCTGTCTTCGATAGACAGAAGCGCAGAAGTG
CTAGCAGTAGTACTACTACTAGTAGTGCTAGTAGCAGAACGATCCCCAGT
GGAGATTCCAAAATCCAGGATGCTGCTTCTGTTTCTGGACCGACCGAGTC
CGTCGTGACGAGGAAGTCGAACAAGCGTGGGGTGAGGAAGCAGCATCCTG
GGAATCAAAAAAAGAAACAGAAGCAGCAGCAGCAGCAACTGCTGCCTCCA
CCTATCATCCGAATTCAGGATGATAGATTTGACAGAGTGTTGCTGATCAA
GCCTCGTCAAGAGGCTTTGAACTATGCCAAGGGGGTGACAGAGACGTCCC
CAGATGACTATCACGTCTTCTGGGTGGACGGATCGACAGCTGCCAACGAG
GCAGCGCCTTCTGGAGTTGCAGTCATCCACGGGCACAGCGGACGAGACGC
TGACGAGCTGTACTGCGTCGACGAGATCCGGCTCAGCCAGTTGGCTGAGT
TGTTTGCCATTGGGGCCGGACTGAGAGCCGCAGTTCGCCAATTGGGGCGG
CTTCAAGTATCAGGCCATGTCGTCCAGTTCTTCACGGACTGCCAAGCGGC
CATGGAAATGCTCCGGCCTGGGGCAAAAAGGTTGAGCCCACTCGCTGGCC
GTCTGGTGCGTCTTGTTGACGCTCTCTCTCACCGACTCTGCTCGATGGGA
GTCAAGGTCGAGCTTCATTGGGTTCCGGGACACCAGTGTGTTCTGGGCCA
TAAGCGAGCTGATTTATTGTCTAGGGTAATCACAAAATTTTTGATGAATA
ATCTGGATGACAAGATCGACCAAATCAATGCAGTTAGAGTGGACTGCACT
TATCTTGAGTTATCCTGA back to topCoding sequence (CDS) from alignment at ch4:3619059..3620126- >KJC3_005755-T1 ID=KJC3_005755-T1|Name=KJC3_005755-T1|organism=Aspergillus niger KJC3|type=CDS|length=1068bp|location=Sequence derived from alignment at ch4:3619059..3620126- (Aspergillus niger KJC3)
ATGGAGGTTGAGAACCCCAGAGCGGTGACCCCGATAAGTTGGGGTCAGAG
ATCTCCTCAAAATATCAGGAGCAGAGGGCATAAACTTTCCTTTAGGAAAG
ACAAAGCACAGAGGGCAGAAGGTGACGTTCGAGGTTCTCGCGTGGTCGAT
AGGGTTCCTTCCCTTGATCGAGTCGAGTCCGAAAACGTCAGCCAGAGAAA
CCGAGATTCCCAAACTGCTCCTGTCTTCGATAGACAGAAGCGCAGAAGTG
CTAGCAGTAGTACTACTACTAGTAGTGCTAGTAGCAGAACGATCCCCAGT
GGAGATTCCAAAATCCAGGATGCTGCTTCTGTTTCTGGACCGACCGAGTC
CGTCGTGACGAGGAAGTCGAACAAGCGTGGGGTGAGGAAGCAGCATCCTG
GGAATCAAAAAAAGAAACAGAAGCAGCAGCAGCAGCAACTGCTGCCTCCA
CCTATCATCCGAATTCAGGATGATAGATTTGACAGAGTGTTGCTGATCAA
GCCTCGTCAAGAGGCTTTGAACTATGCCAAGGGGGTGACAGAGACGTCCC
CAGATGACTATCACGTCTTCTGGGTGGACGGATCGACAGCTGCCAACGAG
GCAGCGCCTTCTGGAGTTGCAGTCATCCACGGGCACAGCGGACGAGACGC
TGACGAGCTGTACTGCGTCGACGAGATCCGGCTCAGCCAGTTGGCTGAGT
TGTTTGCCATTGGGGCCGGACTGAGAGCCGCAGTTCGCCAATTGGGGCGG
CTTCAAGTATCAGGCCATGTCGTCCAGTTCTTCACGGACTGCCAAGCGGC
CATGGAAATGCTCCGGCCTGGGGCAAAAAGGTTGAGCCCACTCGCTGGCC
GTCTGGTGCGTCTTGTTGACGCTCTCTCTCACCGACTCTGCTCGATGGGA
GTCAAGGTCGAGCTTCATTGGGTTCCGGGACACCAGTGTGTTCTGGGCCA
TAAGCGAGCTGATTTATTGTCTAGGGTAATCACAAAATTTTTGATGAATA
ATCTGGATGACAAGATCGACCAAATCAATGCAGTTAGAGTGGACTGCACT
TATCTTGAGTTATCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR002156 |
| DBxref | InterPro:IPR036397 |
| DBxref | PFAM:PF00075 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3619059..3620126 - |
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