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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3647094..3649888- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005762-T1 ID=KJC3_005762-T1|Name=KJC3_005762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2795bp|location=Sequence derived from alignment at ch4:3647094..3649888- (Aspergillus niger KJC3)
CGGAGCTTCATTCTCCAATACCACATTGCTTATTGCCTTTCCGGTTATTT
CTCTCTGTTTGCAGGCCTGTACACGGTATTTCAACCTAGCACTGCTAGTG
TGATAGCCAGCTCCTCTCTGCGAAAGTTGTATTGCCTGCTGAGGGACGCC
GCGGTCTGTTTACTCTCCCCGGACGCCGTCGCCCCTCCAACCCGCCTCAT
GCCTTTCTGTCCATGCGACCGTTGTGACAGCCCCTCGCTCTTGAACCGCA
CTCAATCTCGTGTCCCACGTGCTTTATTTGGTCATGGAGAAGTTTCTGCG
CTCCTGGCGTCAGGATGCGCTGAACCGGGGCCAGCATGATGCGGCCATCT
ACATTGGCGATAAAGTGCTTGCGCTAACCAGTGAGTGAGCCAACCCAGTA
TCATCCCGATCAGTGCTGAACCTATTGCTTCTCTAGACAGCGACTCTGAT
GCCTTTTGGCTCGCACAAGTACATTTTTCGAACAACAACTACGCCCGTGC
CTTGGCCCTCCTGTCACGAAAAGACCTGATCTCCAGAAGTACGGCTTGTC
GCTATCTGGCCGCACACTGCCACATCAAACAGAATCAGTTCGATCAGGCA
CTTTCAGTCCTGGGCGATCATAATCCTACGCATCTTATACGCAGCAGCAA
TAGTCGCCGCAAAATCCAACACCTTAACGGTCAAAGCCATGTTACCTTGC
GGAACGGAAAGACGACAGCGTCGCGCATCGATCGGGGCGAAGAGCGAGAG
CGGGAGGATGCAAATAACGTTCGGTTTGAGGCGGCGATGTGTTACTTACG
GGGACTCTGCTTTGCGAAACAAAATGCGTTTGACCGTGCTCGCGACTGCT
ACAAGGACGCCGTACGCATTGACGTGCAGTGCTTCGAGGCTTTTGACCAG
CTTATGAAGAACTCCCTCATGTCTCCGGCAGAGGAGCTGGAATTCCTCGA
GTCCCTTGATTTCGACTCTGTGTCGAGTCCCGACCAGTCAGTCGCGCAGG
AGGCCGCCCACTTTACGAAGATGCTTTACACCACCCGATTGTCGAAATAT
TCATCGCCTACGATCCTCTCAGACGCTACCGAAACCCTATCAACTCACTA
CAACCTAGCGGAGAATCCGGATATTCTGCTTTCTCGCGCTGAAGCTCTAT
ATACGCAATGCCGATTTGCTGAAGCTTTGGAACTGACTTCGTCAGTTCTG
TCCACATCTCAGTCTGCGGTTTCGTCGCAGATGACGCCTGCAGTCCATAT
TTCCGCCCAAAGCCACCTGGGACATCCGCCTGCCGTGTACCCCTTGCATT
TGGCTTGCTTATATGAGACGGGTGCCACGAACGCCCTGTTCCTTCTGTCC
CATACGCTTGCCGATCATGCTCCCGAAGAGTCTTATACATATCTCGCAAT
TGGTGTTTATTACTTGTCCGTCTCTAAGATCGCTGAAGCTCGACGCTATT
TCTCCAAAGCGTCTCTTTTGGACCCGCATTCTGCGCCAGCATGGATTGGC
TTCGCTCATACCTTTGCTGCCGAAGGAGAGCACGATCAAGCCATTGCGGC
GTATAGCACTGCAGCTCGGCTTTTCCAGGGCAGTCATTTACCGCAGCTCT
TCCTGGGAATGCAACATCTTGCGCTAAACAACATGTCCTTGGCCCATGAG
TACCTGTCGGCCGCCTATTCCATGTCGACCGGATCCGCGTCTAGCTCTGC
TCCCTCTATAAGGGCCAATCCGTCGGAACTCACCTCTTTGGGTGGTGACC
CGCTCGTACTCAACGAGCTGGGTGTAGTTTTGTACCATCAGAATCACCTC
GAGGGCGCCGTCGAGCTGTTCCGTCAGTCCCTCACGCTGGCCACATCCCT
TCAATGTGAACCTGGGGCCTGGGTTGCCACGCGAGCTAATCTCGGGCATG
CCCTGCGACGTATCGGTCAATTCCAAGAGTCACTGGCCGAGTTCGACGAG
TGTCTTCGCATTGGTGCGGCGGGTGCAAGCTTCGGGTACAGCCCGTTCCT
AGGAGGCAGCGGAGGAAATGCCTCTGGAGTCGCCTCATCCGGAGTTGGAG
GGTACGAGGATCGAGGGTTGATTGGATCCCTGCACACTGCTCGCGGCCTG
GTGCTGTTGGAGCTGAACCGCACCATGGAAGCCGTTACAGCCCTGCATGA
GGCAGTACGTGTCTTGGGAGCGAGTGGTGGTGGTGATGCAGCTGGTGGTG
CCGGCATTGCTGGCACGCTCTTATCGCGAGCACTGGAAATCTGGGCATTA
GAAGGCCAGGAGGAGCCGGTGGTGTTAGAGGATGCACGGATCACCACAAG
CCGCAGCTCGACACGGTCTTCCAAGGGAAAGGGGAAAGTATCTCGACGAC
GTGGGACTGTGGACGAAGCATACGCCGAGGAGTGGACCGATGAGGTTGCT
CACGTCGACAGCCAAACCACGGTCACAGAGGAGACAGCTGGAGACAAGGT
GGAGATGGAGCTTGATGATGAGGCTGATGGACTCCTCCGACATGCTATGA
GCCGTGTACGCGGCGGACGAAGCAAGCGACAGCCAGGCCTAAGTCGGGAC
ATGGAAATGAACGACACGCCAGGCCCGGCGGGAGGGCGCAGCCGAGGGTC
GCGGATGCGAAGCAACGCTAGACATAGTTGAAGGACACAGGAAACATTGG
AGCATAGCGACTGGGCGTTTGGAGAGGTATACCCTGGTTTTGTCATTGGA
GCTGGCACCATGGTTCGGTTATAGCATTGGAGGCGTATATCATTTAGTTA
GAGCCAAATGCATAATTAGTAAGCATTCATCAATTATCTTGTGTG back to topCoding sequence (CDS) from alignment at ch4:3647094..3649888- >KJC3_005762-T1 ID=KJC3_005762-T1|Name=KJC3_005762-T1|organism=Aspergillus niger KJC3|type=CDS|length=4584bp|location=Sequence derived from alignment at ch4:3647094..3649888- (Aspergillus niger KJC3)
ACAGCGACTCTGATGCCTTTTGGCTCGCACAAGTACATTTTTCGAACAAC
AACTACGCCCGTGCCTTGGCCCTCCTGTCACGAAAAGACCTGATCTCCAG
AAGTACGGCTTGTCGCTATCTGGCCGCACACTGCCACATCAAACAGAATC
AGTTCGATCAGGCACTTTCAGTCCTGGGCGATCATAATCCTACGCATCTT
ATACGCAGCAGCAATAGTCGCCGCAAAATCCAACACCTTAACGGTCAAAG
CCATGTTACCTTGCGGAACGGAAAGACGACAGCGTCGCGCATCGATCGGG
GCGAAGAGCGAGAGCGGGAGGATGCAAATAACGTTCGGTTTGAGGCGGCG
ATGTGTTACTTACGGGGACTCTGCTTTGCGAAACAAAATGCGTTTGACCG
TGCTCGCGACTGCTACAAGGACGCCGTACGCATTGACGTGCAGTGCTTCG
AGGCTTTTGACCAGCTTATGAAGAACTCCCTCATGTCTCCGGCAGAGGAG
CTGGAATTCCTCGAGTCCCTTGATTTCGACTCTGTGTCGAGTCCCGACCA
GTCAGTCGCGCAGGAGGCCGCCCACTTTACGAAGATGCTTTACACCACCC
GATTGTCGAAATATTCATCGCCTACGATCCTCTCAGACGCTACCGAAACC
CTATCAACTCACTACAACCTAGCGGAGAATCCGGATATTCTGCTTTCTCG
CGCTGAAGCTCTATATACGCAATGCCGATTTGCTGAAGCTTTGGAACTGA
CTTCGTCAGTTCTGTCCACATCTCAGTCTGCGGTTTCGTCGCAGATGACG
CCTGCAGTCCATATTTCCGCCCAAAGCCACCTGGGACATCCGCCTGCCGT
GTACCCCTTGCATTTGGCTTGCTTATATGAGACGGGTGCCACGAACGCCC
TGTTCCTTCTGTCCCATACGCTTGCCGATCATGCTCCCGAAGAGTCTTAT
ACATATCTCGCAATTGGTGTTTATTACTTGTCCGTCTCTAAGATCGCTGA
AGCTCGACGCTATTTCTCCAAAGCGTCTCTTTTGGACCCGCATTCTGCGC
CAGCATGGATTGGCTTCGCTCATACCTTTGCTGCCGAAGGAGAGCACGAT
CAAGCCATTGCGGCGTATAGCACTGCAGCTCGGCTTTTCCAGGGCAGTCA
TTTACCGCAGCTCTTCCTGGGAATGCAACATCTTGCGCTAAACAACATGT
CCTTGGCCCATGAGTACCTGTCGGCCGCCTATTCCATGTCGACCGGATCC
GCGTCTAGCTCTGCTCCCTCTATAAGGGCCAATCCGTCGGAACTCACCTC
TTTGGGTGGTGACCCGCTCGTACTCAACGAGCTGGGTGTAGTTTTGTACC
ATCAGAATCACCTCGAGGGCGCCGTCGAGCTGTTCCGTCAGTCCCTCACG
CTGGCCACATCCCTTCAATGTGAACCTGGGGCCTGGGTTGCCACGCGAGC
TAATCTCGGGCATGCCCTGCGACGTATCGGTCAATTCCAAGAGTCACTGG
CCGAGTTCGACGAGTGTCTTCGCATTGGTGCGGCGGGTGCAAGCTTCGGG
TACAGCCCGTTCCTAGGAGGCAGCGGAGGAAATGCCTCTGGAGTCGCCTC
ATCCGGAGTTGGAGGGTACGAGGATCGAGGGTTGATTGGATCCCTGCACA
CTGCTCGCGGCCTGGTGCTGTTGGAGCTGAACCGCACCATGGAAGCCGTT
ACAGCCCTGCATGAGGCAGTACGTGTCTTGGGAGCGAGTGGTGGTGGTGA
TGCAGCTGGTGGTGCCGGCATTGCTGGCACGCTCTTATCGCGAGCACTGG
AAATCTGGGCATTAGAAGGCCAGGAGGAGCCGGTGGTGTTAGAGGATGCA
CGGATCACCACAAGCCGCAGCTCGACACGGTCTTCCAAGGGAAAGGGGAA
AGTATCTCGACGACGTGGGACTGTGGACGAAGCATACGCCGAGGAGTGGA
CCGATGAGGTTGCTCACGTCGACAGCCAAACCACGGTCACAGAGGAGACA
GCTGGAGACAAGGTGGAGATGGAGCTTGATGATGAGGCTGATGGACTCCT
CCGACATGCTATGAGCCGTGTACGCGGCGGACGAAGCAAGCGACAGCCAG
GCCTAAGTCGGGACATGGAAATGAACGACACGCCAGGCCCGGCGGGAGGG
CGCAGCCGAGGGTCGCGGATGCGAAGCAACGCTAGACATAGTTGAATGGA
GAAGTTTCTGCGCTCCTGGCGTCAGGATGCGCTGAACCGGGGCCAGCATG
ATGCGGCCATCTACATTGGCGATAAAGTGCTTGCGCTAACCAACAGCGAC
TCTGATGCCTTTTGGCTCGCACAAGTACATTTTTCGAACAACAACTACGC
CCGTGCCTTGGCCCTCCTGTCACGAAAAGACCTGATCTCCAGAAGTACGG
CTTGTCGCTATCTGGCCGCACACTGCCACATCAAACAGAATCAGTTCGAT
CAGGCACTTTCAGTCCTGGGCGATCATAATCCTACGCATCTTATACGCAG
CAGCAATAGTCGCCGCAAAATCCAACACCTTAACGGTCAAAGCCATGTTA
CCTTGCGGAACGGAAAGACGACAGCGTCGCGCATCGATCGGGGCGAAGAG
CGAGAGCGGGAGGATGCAAATAACGTTCGGTTTGAGGCGGCGATGTGTTA
CTTACGGGGACTCTGCTTTGCGAAACAAAATGCGTTTGACCGTGCTCGCG
ACTGCTACAAGGACGCCGTACGCATTGACGTGCAGTGCTTCGAGGCTTTT
GACCAGCTTATGAAGAACTCCCTCATGTCTCCGGCAGAGGAGCTGGAATT
CCTCGAGTCCCTTGATTTCGACTCTGTGTCGAGTCCCGACCAGTCAGTCG
CGCAGGAGGCCGCCCACTTTACGAAGATGCTTTACACCACCCGATTGTCG
AAATATTCATCGCCTACGATCCTCTCAGACGCTACCGAAACCCTATCAAC
TCACTACAACCTAGCGGAGAATCCGGATATTCTGCTTTCTCGCGCTGAAG
CTCTATATACGCAATGCCGATTTGCTGAAGCTTTGGAACTGACTTCGTCA
GTTCTGTCCACATCTCAGTCTGCGGTTTCGTCGCAGATGACGCCTGCAGT
CCATATTTCCGCCCAAAGCCACCTGGGACATCCGCCTGCCGTGTACCCCT
TGCATTTGGCTTGCTTATATGAGACGGGTGCCACGAACGCCCTGTTCCTT
CTGTCCCATACGCTTGCCGATCATGCTCCCGAAGAGTCTTATACATATCT
CGCAATTGGTGTTTATTACTTGTCCGTCTCTAAGATCGCTGAAGCTCGAC
GCTATTTCTCCAAAGCGTCTCTTTTGGACCCGCATTCTGCGCCAGCATGG
ATTGGCTTCGCTCATACCTTTGCTGCCGAAGGAGAGCACGATCAAGCCAT
TGCGGCGTATAGCACTGCAGCTCGGCTTTTCCAGGGCAGTCATTTACCGC
AGCTCTTCCTGGGAATGCAACATCTTGCGCTAAACAACATGTCCTTGGCC
CATGAGTACCTGTCGGCCGCCTATTCCATGTCGACCGGATCCGCGTCTAG
CTCTGCTCCCTCTATAAGGGCCAATCCGTCGGAACTCACCTCTTTGGGTG
GTGACCCGCTCGTACTCAACGAGCTGGGTGTAGTTTTGTACCATCAGAAT
CACCTCGAGGGCGCCGTCGAGCTGTTCCGTCAGTCCCTCACGCTGGCCAC
ATCCCTTCAATGTGAACCTGGGGCCTGGGTTGCCACGCGAGCTAATCTCG
GGCATGCCCTGCGACGTATCGGTCAATTCCAAGAGTCACTGGCCGAGTTC
GACGAGTGTCTTCGCATTGGTGCGGCGGGTGCAAGCTTCGGGTACAGCCC
GTTCCTAGGAGGCAGCGGAGGAAATGCCTCTGGAGTCGCCTCATCCGGAG
TTGGAGGGTACGAGGATCGAGGGTTGATTGGATCCCTGCACACTGCTCGC
GGCCTGGTGCTGTTGGAGCTGAACCGCACCATGGAAGCCGTTACAGCCCT
GCATGAGGCAGTACGTGTCTTGGGAGCGAGTGGTGGTGGTGATGCAGCTG
GTGGTGCCGGCATTGCTGGCACGCTCTTATCGCGAGCACTGGAAATCTGG
GCATTAGAAGGCCAGGAGGAGCCGGTGGTGTTAGAGGATGCACGGATCAC
CACAAGCCGCAGCTCGACACGGTCTTCCAAGGGAAAGGGGAAAGTATCTC
GACGACGTGGGACTGTGGACGAAGCATACGCCGAGGAGTGGACCGATGAG
GTTGCTCACGTCGACAGCCAAACCACGGTCACAGAGGAGACAGCTGGAGA
CAAGGTGGAGATGGAGCTTGATGATGAGGCTGATGGACTCCTCCGACATG
CTATGAGCCGTGTACGCGGCGGACGAAGCAAGCGACAGCCAGGCCTAAGT
CGGGACATGGAAATGAACGACACGCCAGGCCCGGCGGGAGGGCGCAGCCG
AGGGTCGCGGATGCGAAGCAACGCTAGACATAGTTGAATGGAGAAGTTTC
TGCGCTCCTGGCGTCAGGATGCGCTGAACCGGGGCCAGCATGATGCGGCC
ATCTACATTGGCGATAAAGTGCTTGCGCTAACCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005762-T1.utr3p1 | KJC3_005762-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005762-T1.utr5p1 | KJC3_005762-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.7 |
| Note | BUSCO:EOG09260S5R |
| Note | SMCOG1272:TPR repeat-containing protein |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR019734 |
| DBxref | PFAM:PF13432 |
| DBxref | PFAM:PF13374 |
| DBxref | PFAM:PF12895 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3647094..3649888 - |
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