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KJC3_005765-T1, KJC3_005765-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005765-T1
Unique NameKJC3_005765-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3655166..3657034-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005765-T1 ID=KJC3_005765-T1|Name=KJC3_005765-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1869bp|location=Sequence derived from alignment at ch4:3655166..3657034- (Aspergillus niger KJC3)
ATGTATCGACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCA
GAACTCTGAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTAC
AGTTTCAGGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTC
ACCGAAACCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCT
AATAGCGGATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAA
TCAACCTGGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAG
ATCAATGGGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGG
TAAGCCGCTCTCTTTTTCCTAGTGCAGGGAGCAGGAATTGACGAGACGAA
GATACCGATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGC
CAGTATGTACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCT
CTTTGAACCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGC
GCGGATCTCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGT
TCAAAAGTTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGC
AAGCAGGGGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCAT
GTAAGGTGACCCTCGCAGCTCACACGGACAGAAAACCAAGATATACTCAT
ATTGTGAACAGGGTAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATG
CGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCA
TAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAG
GGCCCATGATCGGTCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAG
GTTACATCTCCAACGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAA
CATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCC
GCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGATCATTGATGGGTAC
CGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCAGAAACTGTGGCTGC
CATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCT
TTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCC
GATTGCGTATGTAACACACCCAAATGAGCTTTGCAGGGACACTCTCCTAT
TAAAACTGACTTGCAAATAGCTCACCGGATTTGCAAGGTGTCATGGGCGA
TTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTATAGCTGA
CTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCCTTTACA
ATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTGATGCAG
TTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTACAGAGTC
ACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCTTCTGCG
ACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGGGAACGG
TTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAATAGTCT
GACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAGTTGTAC
GACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGTGCAACT
CGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCAGGAACA
GGGTTCCTGGAAGCTTTAG
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Coding sequence (CDS) from alignment at ch4:3655166..3657034-

>KJC3_005765-T1 ID=KJC3_005765-T1|Name=KJC3_005765-T1|organism=Aspergillus niger KJC3|type=CDS|length=6768bp|location=Sequence derived from alignment at ch4:3655166..3657034- (Aspergillus niger KJC3)
CTCACCGGATTTGCAAGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGA
ACCGATGGTATCCCCGTTGCCTATAGCTGACTCTGGCGCCGGTTGCATGG
GTGCCATCGCTGCCTTGACGGGCCTTTACAATCGTATACGATACGGCGGA
TCGTATATTGGTCAGGTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGC
TGTCGGCCAATATCCGAACTCTACAGAGTCACAGCTGCAGCATGCCTTTG
CTCCTGCATTTTCCAAGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCT
GTCCTGGCATTAGAGGTCATGAGGGAACGGTTTCCACACCTCTTTGTGGA
ACCATCCCCAGGGGATCGCCAGAATAGTCTGACAGAGATATGGTACTCTC
ATCACTACGGAGCGGACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAG
GGAGTCGAGAACGGCTTTGCTCGTGCAACTCGACCAAACGGTGCAGATGC
ATCTCCATCCTGGGATTTCCCGCAGGAACAGGGTTCCTGGAAGCTTTAGG
GTAGAACGAATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGG
AAGACACCGCCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGA
AGGTGTCAAGGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCG
GTCGTACATTAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCA
ACGGTGCCTGACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCG
TGCTGTGGAATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAG
CCCTTCTCGCTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCC
CTTCGAAAACTTGGATACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAA
GCGTGGGAAAGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAG
GTGAGTGGTGCCATCGCCCAGGATGGCAACAGATAGCCGATTGCATACCG
ATATCCATGCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATG
TACCGGACCAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAA
CCCAACTTCCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATC
TCACTGACTACGATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAG
TTCTCAGCAGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGG
GGTGACGGTGTACGAGTATGAAGAATTCAAAAACACTCCCCATATGTATC
GACCCTCAGAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCT
GAACGTCTCGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCA
GGCCAATTCAGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAA
CCCTGGCAGCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCG
GATCTGCAGTCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCT
GGAAAGGGCAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATG
GGTACTCCCGATCCGACCCTAAGGTCAAACGATACATGAAAGCTCACCGG
ATTTGCAAGGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGG
TATCCCCGTTGCCTATAGCTGACTCTGGCGCCGGTTGCATGGGTGCCATC
GCTGCCTTGACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATAT
TGGTCAGGTTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCC
AATATCCGAACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCA
TTTTCCAAGTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGC
ATTAGAGGTCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCCC
CAGGGGATCGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTAC
GGAGCGGACGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGA
GAACGGCTTTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCAT
CCTGGGATTTCCCGCAGGAACAGGGTTCCTGGAAGCTTTAGGGTAGAACG
AATATAGAGGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACC
GCCAGCCGCTTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCA
AGGTCTTGGAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACA
TTAGCTGAATACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCC
TGACGTACCATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGG
AATTAGATCTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTC
GCTGATGTCGATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAA
ACTTGGATACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGA
AAGGGATCGTCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGG
TGCCATCGCCCAGGATGGCAACAGATAGCCGATTGCATACCGATATCCAT
GCTGCACAATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGAC
CAAGCATGATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTT
CCACTCTGAAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGAC
TACGATGAGATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGC
AGCTGAGCTAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGG
TGTACGAGTATGAAGAATTCAAAAACACTCCCCATATGTATCGACCCTCA
GAAGAGGCAAGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCT
CGGTCTCCCAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATT
CAGATACGATTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCA
GCTCTCAAGGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCA
GTCAGCATCTAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGG
CAACGCTTTTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCC
CGATCCGACCCTAAGGTCAAACGATACATGAAAGCTCACCGGATTTGCAA
GGTGTCATGGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCG
TTGCCTATAGCTGACTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTT
GACGGGCCTTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAGG
TTTCCTTGATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCG
AACTCTACAGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAA
GTTACGCTTCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGG
TCATGAGGGAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGAT
CGCCAGAATAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGGA
CGTGGAAGTTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCT
TTGCTCGTGCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGAT
TTCCCGCAGGAACAGGGTTCCTGGAAGCTTTAGGGTAGAACGAATATAGA
GGAACCTTGGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCG
CTTTCAACCCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTG
GAGCTCTGTTGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGA
ATACGGAGCGGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTAC
CATTCTTTCAGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGAT
CTCAAGGCTGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGT
CGATGTGATCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGAT
ACAGCCCAGAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATC
GTCTACATAGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCG
CCCAGGATGGCAACAGATAGCCGATTGCATACCGATATCCATGCTGCACA
ATCAAATCCGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAAGCATG
ATAACGAGTTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCACTCTG
AAAATGCTCGGTTTAGACAGCCACCGCGCGGATCTCACTGACTACGATGA
GATCATAAACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGCTGAGC
TAGAGAGACTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGTACGAG
TATGAAGAATTCAAAAACACTCCCCATATGTATCGACCCTCAGAAGAGGC
AAGAAGAATTTACGATCTTCTTTGCCAGAACTCTGAACGTCTCGGTCTCC
CAAGCGAGATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTCAGATACG
ATTTACTATCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAGCTCTCAA
GGGAATAGAAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAGTCAGCAT
CTAAGCCACATGAACGGAAGACTACAATCAACCTGGAAAGGGCAACGCTT
TTCGGCTTTCAGGCACTGGCCGCCAAGATCAATGGGTACTCCCGATCCGA
CCCTAAGGTCAAACGATACATGAAAGCTCACCGGATTTGCAAGGTGTCAT
GGGCGATTCCTTGGCCGTGCGGCGGAACCGATGGTATCCCCGTTGCCTAT
AGCTGACTCTGGCGCCGGTTGCATGGGTGCCATCGCTGCCTTGACGGGCC
TTTACAATCGTATACGATACGGCGGATCGTATATTGGTCAGGTTTCCTTG
ATGCAGTTCAACTTACTGCTCTTTGCTGTCGGCCAATATCCGAACTCTAC
AGAGTCACAGCTGCAGCATGCCTTTGCTCCTGCATTTTCCAAGTTACGCT
TCTGCGACAGCGTTGGCCGCAGTTCTGTCCTGGCATTAGAGGTCATGAGG
GAACGGTTTCCACACCTCTTTGTGGAACCATCCCCAGGGGATCGCCAGAA
TAGTCTGACAGAGATATGGTACTCTCATCACTACGGAGCGGACGTGGAAG
TTGTACGACCTGTAGCTGAGATCGAGGGAGTCGAGAACGGCTTTGCTCGT
GCAACTCGACCAAACGGTGCAGATGCATCTCCATCCTGGGATTTCCCGCA
GGAACAGGGTTCCTGGAAGCTTTAGGGTAGAACGAATATAGAGGAACCTT
GGTGGAAGGTTATGCGCCTGCCAGGGAAGACACCGCCAGCCGCTTTCAAC
CCTAGTGGAAGTCATAGGATACTCGAAGGTGTCAAGGTCTTGGAGCTCTG
TTGTGTCATTGCAGGGCCCATGATCGGTCGTACATTAGCTGAATACGGAG
CGGATGTTTTGAAGGTTACATCTCCAACGGTGCCTGACGTACCATTCTTT
CAGGTCGACAATAACATGGGCAAGCGTGCTGTGGAATTAGATCTCAAGGC
TGATGAGGATCGCCGCCATTTCGAAGCCCTTCTCGCTGATGTCGATGTGA
TCATTGATGGGTACCGCCCTGGCGCCCTTCGAAAACTTGGATACAGCCCA
GAAACTGTGGCTGCCATGGCAGAGAAGCGTGGGAAAGGGATCGTCTACAT
AGACGAAACCTGCTTTGGGCACGAAGGTGAGTGGTGCCATCGCCCAGGAT
GGCAACAGATAGCCGATTGCATACCGATATCCATGCTGCACAATCAAATC
CGTATCGGCGAATGGCAGCCAGTATGTACCGGACCAAGCATGATAACGAG
TTCTTTCATCTGCATGGCTCTTTGAACCCAACTTCCACTCTGAAAATGCT
CGGTTTAGACAGCCACCGCGCGGATCTCACTGACTACGATGAGATCATAA
ACACTATTCAGAGCCAGGTTCAAAAGTTCTCAGCAGCTGAGCTAGAGAGA
CTCAACGAGACGAATCGGCAAGCAGGGGTGACGGTGTACGAGTATGAAGA
ATTCAAAAACACTCCCCATATGTATCGACCCTCAGAAGAGGCAAGAAGAA
TTTACGATCTTCTTTGCCAGAACTCTGAACGTCTCGGTCTCCCAAGCGAG
ATCTATAGTAGCCGAGTACAGTTTCAGGCCAATTCAGATACGATTTACTA
TCCGATCCCTTTCAAGGTCACCGAAACCCTGGCAGCTCTCAAGGGAATAG
AAGGAGCCCTGGCAGCTCTAATAGCGGATCTGCAGTCAGCATCTAAGCCA
CATGAACGGAAGACTACAATCAACCTGGAAAGGGCAACGCTTTTCGGCTT
TCAGGCACTGGCCGCCAAGATCAATGGGTACTCCCGATCCGACCCTAAGG
TCAAACGATACATGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008410CoA-transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005765KJC3_005765Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005765-T1KJC3_005765-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005765-T1.cdsKJC3_005765-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005765-T1.exon4KJC3_005765-T1.exon4Aspergillus niger KJC3exon
KJC3_005765-T1.exon3KJC3_005765-T1.exon3Aspergillus niger KJC3exon
KJC3_005765-T1.exon2KJC3_005765-T1.exon2Aspergillus niger KJC3exon
KJC3_005765-T1.exon1KJC3_005765-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_4.7
NoteSMCOG1189:L-carnitine dehydratase/bile acid-inducible
DBxrefInterPro:IPR023606
DBxrefInterPro:IPR003673
DBxrefPFAM:PF02515
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3655166..3657034 -
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