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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3729983..3732933- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005787-T1 ID=KJC3_005787-T1|Name=KJC3_005787-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2951bp|location=Sequence derived from alignment at ch4:3729983..3732933- (Aspergillus niger KJC3)
TGGAGACTTTGTGTGTTCGATCTATTTAGTTCCCTCTCAGTAGTTTCCGC
AATTGTCGCTTGCTCCATGGCCTATCATGGCCGTTGCAGCCAATGTGAGC
GCGCTGACAGACGAGCTAATTATAGCCGTTGCGAAGCCCGATAGAAAGGC
ATTGCACTCAAGCCCTTAATGTAAAGCAGATCTCATGCTGACGCTCCTGT
CCAGGACACTCCACATTTCAGGACCTTAAAACGTCGGACTGAAGACACTT
TCAAGTCGCATGCTTATGCGCGCACGGATCAATTCGCCGTCGCCAGCCAA
CTTGAAGGACTGCAGGAGAAATTCCAAGTCCTTTGTAGGGATGAATTGGC
TGATGCTTTGCGTATCCGACTAACGGAGCTGCAAGAGCACCAAAGCTCAT
GGTTCCCCGAAATACTATCATTACTTCTGCAGCTGGCAGACCGCCCTGCT
CAGCGGTCCAGGGTAGACCAGGTGGTGACAGCAAAGCCCAGAGAGGAAGC
GAAATCGCTTGTCTGGGATGAATTGGACGCCGCTGGATCGGCATATTGTG
GCGAGGATATTTGGGAAGATGTAGATTATGGTGCTGATTCCTCTGATGAG
GACCTTGCATCGGTGTCCACTGACAGCTACCATACGCGCAATCAACCAGA
AACGTCTGTCACAACAGAGGAAGACTACATGATTCCTGACGAAGTCTTCA
CATCTGGAGAGAACGACGAATTCATTGAATCGATTGCTAATGCACAATTT
TGGAGAAATGAAGAGAGCCCGGCCACTGAAAAAGCTGGCCCTGCTTCTCA
AATTATTACTGAGCTCCAGGTAGTAAGGGAGACTGTATTCATGTTGCAAG
GTCTACCTACGTCTCTGTTCTGGCGATTCGATGGTAATGTTGAAATACAT
CGAAGATATACCATTGCAGACCTGTCGAATGAGGCATTCGTCTCATTACT
GCGATCACTGAGCTCGACAGGAGCTAAACTGGATATCCTTAGGCAGTTTT
GCAACACTCCACAGGAGATCCCTTATATGCAAACGTTTCATCGGGGCTTG
GAGAGCTGTCTTAGAGAGTTCGATTTGTTTCTATCTAACGTGCAACACCA
GTACCTTGCTCAGACATCAATCGTGTCCATCAGTCTTCTGCAGCTCTCAG
AAGATGTTTATCGGGAGTCCAGACTGCCTTTGCTGTTGTCTGACCTGGTG
TCTAGCTTGATGCCAAACACTTCAAATACTTCAAATACCGCTACGCAGTG
TCTCGACTCACTTTATGATCTCGTGTGCCTGACACAAGCTGCTGGTGATG
ATGGCTTATTTAAGGCCCTTGCCAAGTTATTCTTCTCATGCTTCGAAACC
TATGCACATCCCGTCCGTATGTGGATGGAGAAAGGCCAGTTGGATGATTC
TGCAGCTGGATTTTTCATACGCAACAGTCAAAGTGACAGTGATCTGCGAA
CGCTATGGCATGATTGGTACTCACTGGATGCGATACTCCCGAATTCCCCG
AAGTTTATCCAACCTTTTGCGTCCAAGATCTTCATAACTGGCAAAAGCAT
GGTTTTTCTGCGACATCTGAATACGTCTGAGGACGATGAGACTCCGCGGA
AGGTCTCCTTAACACTGGACGAAGTTTTACCGCCAGACTCATCTGCGTTC
TGCCTTCCGTTCTCCGTTCTACTCGAGTTTTCATTCGGAAAATTAGTTGA
TGAAAACCATGCCTACACTTCGGCTTTGTTAAGGACGGAGCTTGGCCAGC
AATGTGGTTTGTGGACATCCCTTCAAGCACTGGAGTATATCTATCTCGGC
AAAGACATGAGCATTTTCGGACCGATTGACAGCAAGATATTCGACCTCAT
GGACAGAGGGAAAGGTGCTTGGAGTGATCGATTCCTGCTTACTGAAGTGG
CTCAAAGCGCCTTCGGTGCTTTGCCATTCATCGACCCTTCCCGGCTTCTC
GTTCGAACACCCAAGGAAGCACACAGCAATGCAGTAAGCCGCAGCCGCTC
AGTCAAGGTGCTAGACGCCATATCGTTCGACTACATCTTGCCCTGGCCTG
TAGCCAATATAATCACGAAAGACACTCTTATGGGATACCAACGCATCTCC
ACTTTCCTTATGCAACTCCGCAGAGCAAAGCAAACGATAGTAAAGCAGCG
CTTGCAACACAACAACCAATCTGACAAAATTCAAGATTCAAGGAACAACA
CGCTGAGCTATGCTCTCAGACACAACATGCTCTGGTTTCTCAACGCAATC
TACAGCCATATGACTGATTTTGTCATCTCCGCAGCGACGAAGTCCTTGCG
CAGTGACCTTTCTGCTTCTGCCGACGTGGATGCCATGGTAGCGGCGCATC
GCTCATTCATGCACTCCTTGGAGGAACAATGCCTTTTATCCACCAACCTG
AATGCTCTTCACCAAGCTATCATCACAATCCTTGACCTCTGCGTCAGCTT
TGCAGACATTCAAAACTCACGCTATGGTGACCATAGCCTCGATCACGCGC
GCACCGCCACCAAGAGCGCAAAATCTATGCATCGCAGGAACACACAGCGC
TCTGAACCTGACCTGGATGACCCAAGCGATGAGGACGATGACGATGACTC
CGACTTAGACGAAGATAACCTCGCTGCCTCGTTTCACGAAACCCACTACA
TGCAACGAGTACGAGATATCAAAGACCAGTTCAATCGTCTATTAGCGTTC
ATTGTGGCTGGTCTAAGGGGTGTAGGGCGTGTCGACGGCCAACTTAGTTG
GGAGATATTGGCCGAGAAGCTCGAGTGGAGGAAGGCAAGTGGACAGCAGC
AGAGTCTTATACTGTAATCTCTTCTTGTAAGAGGAGTTTGGCAATCGGCT
AGGTTAGGTTTATGATACCCGGAAATTGAAATGTCTTCAATTAATTTAAT
ATCTCTCCAATATATCGACTCACTTACTACACGGTGTTTATGAATCCAAT
T back to topCoding sequence (CDS) from alignment at ch4:3729983..3732933- >KJC3_005787-T1 ID=KJC3_005787-T1|Name=KJC3_005787-T1|organism=Aspergillus niger KJC3|type=CDS|length=5370bp|location=Sequence derived from alignment at ch4:3729983..3732933- (Aspergillus niger KJC3)
GACACTCCACATTTCAGGACCTTAAAACGTCGGACTGAAGACACTTTCAA
GTCGCATGCTTATGCGCGCACGGATCAATTCGCCGTCGCCAGCCAACTTG
AAGGACTGCAGGAGAAATTCCAAGTCCTTTGTAGGGATGAATTGGCTGAT
GCTTTGCGTATCCGACTAACGGAGCTGCAAGAGCACCAAAGCTCATGGTT
CCCCGAAATACTATCATTACTTCTGCAGCTGGCAGACCGCCCTGCTCAGC
GGTCCAGGGTAGACCAGGTGGTGACAGCAAAGCCCAGAGAGGAAGCGAAA
TCGCTTGTCTGGGATGAATTGGACGCCGCTGGATCGGCATATTGTGGCGA
GGATATTTGGGAAGATGTAGATTATGGTGCTGATTCCTCTGATGAGGACC
TTGCATCGGTGTCCACTGACAGCTACCATACGCGCAATCAACCAGAAACG
TCTGTCACAACAGAGGAAGACTACATGATTCCTGACGAAGTCTTCACATC
TGGAGAGAACGACGAATTCATTGAATCGATTGCTAATGCACAATTTTGGA
GAAATGAAGAGAGCCCGGCCACTGAAAAAGCTGGCCCTGCTTCTCAAATT
ATTACTGAGCTCCAGGTAGTAAGGGAGACTGTATTCATGTTGCAAGGTCT
ACCTACGTCTCTGTTCTGGCGATTCGATGGTAATGTTGAAATACATCGAA
GATATACCATTGCAGACCTGTCGAATGAGGCATTCGTCTCATTACTGCGA
TCACTGAGCTCGACAGGAGCTAAACTGGATATCCTTAGGCAGTTTTGCAA
CACTCCACAGGAGATCCCTTATATGCAAACGTTTCATCGGGGCTTGGAGA
GCTGTCTTAGAGAGTTCGATTTGTTTCTATCTAACGTGCAACACCAGTAC
CTTGCTCAGACATCAATCGTGTCCATCAGTCTTCTGCAGCTCTCAGAAGA
TGTTTATCGGGAGTCCAGACTGCCTTTGCTGTTGTCTGACCTGGTGTCTA
GCTTGATGCCAAACACTTCAAATACTTCAAATACCGCTACGCAGTGTCTC
GACTCACTTTATGATCTCGTGTGCCTGACACAAGCTGCTGGTGATGATGG
CTTATTTAAGGCCCTTGCCAAGTTATTCTTCTCATGCTTCGAAACCTATG
CACATCCCGTCCGTATGTGGATGGAGAAAGGCCAGTTGGATGATTCTGCA
GCTGGATTTTTCATACGCAACAGTCAAAGTGACAGTGATCTGCGAACGCT
ATGGCATGATTGGTACTCACTGGATGCGATACTCCCGAATTCCCCGAAGT
TTATCCAACCTTTTGCGTCCAAGATCTTCATAACTGGCAAAAGCATGGTT
TTTCTGCGACATCTGAATACGTCTGAGGACGATGAGACTCCGCGGAAGGT
CTCCTTAACACTGGACGAAGTTTTACCGCCAGACTCATCTGCGTTCTGCC
TTCCGTTCTCCGTTCTACTCGAGTTTTCATTCGGAAAATTAGTTGATGAA
AACCATGCCTACACTTCGGCTTTGTTAAGGACGGAGCTTGGCCAGCAATG
TGGTTTGTGGACATCCCTTCAAGCACTGGAGTATATCTATCTCGGCAAAG
ACATGAGCATTTTCGGACCGATTGACAGCAAGATATTCGACCTCATGGAC
AGAGGGAAAGGTGCTTGGAGTGATCGATTCCTGCTTACTGAAGTGGCTCA
AAGCGCCTTCGGTGCTTTGCCATTCATCGACCCTTCCCGGCTTCTCGTTC
GAACACCCAAGGAAGCACACAGCAATGCAGTAAGCCGCAGCCGCTCAGTC
AAGGTGCTAGACGCCATATCGTTCGACTACATCTTGCCCTGGCCTGTAGC
CAATATAATCACGAAAGACACTCTTATGGGATACCAACGCATCTCCACTT
TCCTTATGCAACTCCGCAGAGCAAAGCAAACGATAGTAAAGCAGCGCTTG
CAACACAACAACCAATCTGACAAAATTCAAGATTCAAGGAACAACACGCT
GAGCTATGCTCTCAGACACAACATGCTCTGGTTTCTCAACGCAATCTACA
GCCATATGACTGATTTTGTCATCTCCGCAGCGACGAAGTCCTTGCGCAGT
GACCTTTCTGCTTCTGCCGACGTGGATGCCATGGTAGCGGCGCATCGCTC
ATTCATGCACTCCTTGGAGGAACAATGCCTTTTATCCACCAACCTGAATG
CTCTTCACCAAGCTATCATCACAATCCTTGACCTCTGCGTCAGCTTTGCA
GACATTCAAAACTCACGCTATGGTGACCATAGCCTCGATCACGCGCGCAC
CGCCACCAAGAGCGCAAAATCTATGCATCGCAGGAACACACAGCGCTCTG
AACCTGACCTGGATGACCCAAGCGATGAGGACGATGACGATGACTCCGAC
TTAGACGAAGATAACCTCGCTGCCTCGTTTCACGAAACCCACTACATGCA
ACGAGTACGAGATATCAAAGACCAGTTCAATCGTCTATTAGCGTTCATTG
TGGCTGGTCTAAGGGGTGTAGGGCGTGTCGACGGCCAACTTAGTTGGGAG
ATATTGGCCGAGAAGCTCGAGTGGAGGAAGGCAAGTGGACAGCAGCAGAG
TCTTATACTGTAAATGGCCGTTGCAGCCAATGTGAGCGCGCTGACAGACG
AGCTAATTATAGCCGTTGCGAAGCCCGATAGAAAGGACACTCCACATTTC
AGGACCTTAAAACGTCGGACTGAAGACACTTTCAAGTCGCATGCTTATGC
GCGCACGGATCAATTCGCCGTCGCCAGCCAACTTGAAGGACTGCAGGAGA
AATTCCAAGTCCTTTGTAGGGATGAATTGGCTGATGCTTTGCGTATCCGA
CTAACGGAGCTGCAAGAGCACCAAAGCTCATGGTTCCCCGAAATACTATC
ATTACTTCTGCAGCTGGCAGACCGCCCTGCTCAGCGGTCCAGGGTAGACC
AGGTGGTGACAGCAAAGCCCAGAGAGGAAGCGAAATCGCTTGTCTGGGAT
GAATTGGACGCCGCTGGATCGGCATATTGTGGCGAGGATATTTGGGAAGA
TGTAGATTATGGTGCTGATTCCTCTGATGAGGACCTTGCATCGGTGTCCA
CTGACAGCTACCATACGCGCAATCAACCAGAAACGTCTGTCACAACAGAG
GAAGACTACATGATTCCTGACGAAGTCTTCACATCTGGAGAGAACGACGA
ATTCATTGAATCGATTGCTAATGCACAATTTTGGAGAAATGAAGAGAGCC
CGGCCACTGAAAAAGCTGGCCCTGCTTCTCAAATTATTACTGAGCTCCAG
GTAGTAAGGGAGACTGTATTCATGTTGCAAGGTCTACCTACGTCTCTGTT
CTGGCGATTCGATGGTAATGTTGAAATACATCGAAGATATACCATTGCAG
ACCTGTCGAATGAGGCATTCGTCTCATTACTGCGATCACTGAGCTCGACA
GGAGCTAAACTGGATATCCTTAGGCAGTTTTGCAACACTCCACAGGAGAT
CCCTTATATGCAAACGTTTCATCGGGGCTTGGAGAGCTGTCTTAGAGAGT
TCGATTTGTTTCTATCTAACGTGCAACACCAGTACCTTGCTCAGACATCA
ATCGTGTCCATCAGTCTTCTGCAGCTCTCAGAAGATGTTTATCGGGAGTC
CAGACTGCCTTTGCTGTTGTCTGACCTGGTGTCTAGCTTGATGCCAAACA
CTTCAAATACTTCAAATACCGCTACGCAGTGTCTCGACTCACTTTATGAT
CTCGTGTGCCTGACACAAGCTGCTGGTGATGATGGCTTATTTAAGGCCCT
TGCCAAGTTATTCTTCTCATGCTTCGAAACCTATGCACATCCCGTCCGTA
TGTGGATGGAGAAAGGCCAGTTGGATGATTCTGCAGCTGGATTTTTCATA
CGCAACAGTCAAAGTGACAGTGATCTGCGAACGCTATGGCATGATTGGTA
CTCACTGGATGCGATACTCCCGAATTCCCCGAAGTTTATCCAACCTTTTG
CGTCCAAGATCTTCATAACTGGCAAAAGCATGGTTTTTCTGCGACATCTG
AATACGTCTGAGGACGATGAGACTCCGCGGAAGGTCTCCTTAACACTGGA
CGAAGTTTTACCGCCAGACTCATCTGCGTTCTGCCTTCCGTTCTCCGTTC
TACTCGAGTTTTCATTCGGAAAATTAGTTGATGAAAACCATGCCTACACT
TCGGCTTTGTTAAGGACGGAGCTTGGCCAGCAATGTGGTTTGTGGACATC
CCTTCAAGCACTGGAGTATATCTATCTCGGCAAAGACATGAGCATTTTCG
GACCGATTGACAGCAAGATATTCGACCTCATGGACAGAGGGAAAGGTGCT
TGGAGTGATCGATTCCTGCTTACTGAAGTGGCTCAAAGCGCCTTCGGTGC
TTTGCCATTCATCGACCCTTCCCGGCTTCTCGTTCGAACACCCAAGGAAG
CACACAGCAATGCAGTAAGCCGCAGCCGCTCAGTCAAGGTGCTAGACGCC
ATATCGTTCGACTACATCTTGCCCTGGCCTGTAGCCAATATAATCACGAA
AGACACTCTTATGGGATACCAACGCATCTCCACTTTCCTTATGCAACTCC
GCAGAGCAAAGCAAACGATAGTAAAGCAGCGCTTGCAACACAACAACCAA
TCTGACAAAATTCAAGATTCAAGGAACAACACGCTGAGCTATGCTCTCAG
ACACAACATGCTCTGGTTTCTCAACGCAATCTACAGCCATATGACTGATT
TTGTCATCTCCGCAGCGACGAAGTCCTTGCGCAGTGACCTTTCTGCTTCT
GCCGACGTGGATGCCATGGTAGCGGCGCATCGCTCATTCATGCACTCCTT
GGAGGAACAATGCCTTTTATCCACCAACCTGAATGCTCTTCACCAAGCTA
TCATCACAATCCTTGACCTCTGCGTCAGCTTTGCAGACATTCAAAACTCA
CGCTATGGTGACCATAGCCTCGATCACGCGCGCACCGCCACCAAGAGCGC
AAAATCTATGCATCGCAGGAACACACAGCGCTCTGAACCTGACCTGGATG
ACCCAAGCGATGAGGACGATGACGATGACTCCGACTTAGACGAAGATAAC
CTCGCTGCCTCGTTTCACGAAACCCACTACATGCAACGAGTACGAGATAT
CAAAGACCAGTTCAATCGTCTATTAGCGTTCATTGTGGCTGGTCTAAGGG
GTGTAGGGCGTGTCGACGGCCAACTTAGTTGGGAGATATTGGCCGAGAAG
CTCGAGTGGAGGAAGGCAAGTGGACAGCAGCAGAGTCTTATACTGTAAAT
GGCCGTTGCAGCCAATGTGAGCGCGCTGACAGACGAGCTAATTATAGCCG
TTGCGAAGCCCGATAGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043015 | gamma-tubulin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005787-T1.utr3p1 | KJC3_005787-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005787-T1.utr5p1 | KJC3_005787-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR040457 |
| DBxref | InterPro:IPR042241 |
| DBxref | InterPro:IPR041470 |
| DBxref | PFAM:PF17681 |
| DBxref | PFAM:PF04130 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3729983..3732933 - |
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